Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0129200-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:1792146:1793090:1 gene:Os10g0129200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140L04.2 protein. (Os10t0129200-00)
Sequence

ATGGTCATCATATTGATCCCACGAACAGCCAGCCCAGGCAACAACCCTGTAGATATGACA
CTCGACACAATGACGATAGGCTTGCCAGTAAGAGAAGGTGTGAGCAGCGCGAAGCTCACC
CTCATCGTAGCGTGTTTTCTGCTACCGTTTCTTGTCGAGGCTGAATCGCGGGCACCGGCG
CCACTCTCCTTCAGCTTCGACTTCTCCAATTCAGCCAGCTACCGCCTGGAGGACCTCCTG
TTCGAGGGCAACGCAAGCGAGCCCAGCAACAAGCTGGTGGACCTCACCTGCAACGAGTTC
GCGGAGACGATCCACAAGTGCAAGGGGCGGATGTCGTACGCCCACGCCGTGAAGTTCTAC
GACGCCACCACGGGCGAGGTGGCCAGCTTCAGCACGCGATTCACCTTCGCTATCGCCATC
AGAAGCGACATCAGCAACCCGACGGACACAAAGGGGGACGGGCTGGCCTTCTTCCTCGCT
GCTTACCCATCAACGATTCCATCGAATTCAGATGGAGGCAACCTTGGCCTCCTTGCCACC
AATCATTCGAAGGCCTACGGCACAGACCGGTTCATCGCCGTCGAGTTCGACACATACAAC
AACATCTGGGACCCCAATAAGACCTACGACCACATGGGCGTCGACATCAGCGCCATCGAG
TCGGCTAACACGACAAGTTTGCCGAGCTACAGCCTGAATGGCACGATGACAGCCTCCATC
AGTTTTAACAGCAGCACCCGGATGCTGCTTGCCAACCTGCATTTTGATGATCATCCATCG
TTTCAACCGGCCGAGGTCAGTGCGATTTTGCCGGATCCGGTCACATTGCTTCCACAAGAG
GTATCCGTTGGGTTTTCCGCAGCCACCGGCGGCTCTGGCAGTGAGCTCCATCAGATACTT
TCATGGTCCTTCAACTCCACTCTTGGTTTGGCCCTCTACTGCTAA

Peptide Sequence

PEP ID

Os10t0129200-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:1792146:1793090:1 gene:Os10g0129200 transcript:Os10t0129200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140L04.2 protein. (Os10t0129200-00)
Sequence

MVIILIPRTASPGNNPVDMTLDTMTIGLPVREGVSSAKLTLIVACFLLPFLVEAESRAPA
PLSFSFDFSNSASYRLEDLLFEGNASEPSNKLVDLTCNEFAETIHKCKGRMSYAHAVKFY
DATTGEVASFSTRFTFAIAIRSDISNPTDTKGDGLAFFLAAYPSTIPSNSDGGNLGLLAT
NHSKAYGTDRFIAVEFDTYNNIWDPNKTYDHMGVDISAIESANTTSLPSYSLNGTMTASI
SFNSSTRMLLANLHFDDHPSFQPAEVSAILPDPVTLLPQEVSVGFSAATGGSGSELHQIL
SWSFNSTLGLALYC

Transcript Sequence

Transcript ID

Os10t0129200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:1792146:1793090:1 gene:Os10g0129200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140L04.2 protein. (Os10t0129200-00)
Sequence

ATGGTCATCATATTGATCCCACGAACAGCCAGCCCAGGCAACAACCCTGTAGATATGACA
CTCGACACAATGACGATAGGCTTGCCAGTAAGAGAAGGTGTGAGCAGCGCGAAGCTCACC
CTCATCGTAGCGTGTTTTCTGCTACCGTTTCTTGTCGAGGCTGAATCGCGGGCACCGGCG
CCACTCTCCTTCAGCTTCGACTTCTCCAATTCAGCCAGCTACCGCCTGGAGGACCTCCTG
TTCGAGGGCAACGCAAGCGAGCCCAGCAACAAGCTGGTGGACCTCACCTGCAACGAGTTC
GCGGAGACGATCCACAAGTGCAAGGGGCGGATGTCGTACGCCCACGCCGTGAAGTTCTAC
GACGCCACCACGGGCGAGGTGGCCAGCTTCAGCACGCGATTCACCTTCGCTATCGCCATC
AGAAGCGACATCAGCAACCCGACGGACACAAAGGGGGACGGGCTGGCCTTCTTCCTCGCT
GCTTACCCATCAACGATTCCATCGAATTCAGATGGAGGCAACCTTGGCCTCCTTGCCACC
AATCATTCGAAGGCCTACGGCACAGACCGGTTCATCGCCGTCGAGTTCGACACATACAAC
AACATCTGGGACCCCAATAAGACCTACGACCACATGGGCGTCGACATCAGCGCCATCGAG
TCGGCTAACACGACAAGTTTGCCGAGCTACAGCCTGAATGGCACGATGACAGCCTCCATC
AGTTTTAACAGCAGCACCCGGATGCTGCTTGCCAACCTGCATTTTGATGATCATCCATCG
TTTCAACCGGCCGAGGTCAGTGCGATTTTGCCGGATCCGGTCACATTGCTTCCACAAGAG
GTATCCGTTGGGTTTTCCGCAGCCACCGGCGGCTCTGGCAGTGAGCTCCATCAGATACTT
TCATGGTCCTTCAACTCCACTCTTGGTTTGGCCCTCTACTGCTAA