Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0124100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:1532800:1536184:1 gene:Os10g0124100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0124100-01)
Sequence	ATGGCGAGGTGCTTCCCGTACACGCGTAACCCCGTGGCGGAGTCGATGTCTTCGGCGGCG GCGGCGGCGGTTGAGCCGGGGATCGATAAGCTCCAGAAAGAAAGGGAAATGATGCAAAAG AAGGAAAAGAAGGAAAGGAAGAAAGAGAAAAGGAGACAAAAGAAAGCTGCCCAGCTGGGT GAGAAATATGAGACAGATGATCATCACTCTAAGCATGGCCATAAGAAGAGAAAGCACTCA GGCTGTGAAATAGTTGGCGAGGAGACAAGAAAAGTTTGTAATGTTACCATGGAGCATTTG GAGAAGAGCAGTCTTTCTGAAGAGCATGAGGCTCCTTCCTACAGTCAGGCTTTGCGTTGT ACCCCAGAGAGCTCACTGGACAGCACTAAGAGGCTGAGGACTGAAGTGTCAAGTAGCCCT AGTCAAACCAGAAATGGTGTTAACATTCGTGTAAAGTTTACACCTACAAATCAAAGAAGA GACCCAGAAGCAACAACAGGAATGTCAATGAAACCAAGAGTTACTGAACAATCACCAGTC AAAGAAACCGGAATGGATCTGTCCATGGCCAATAGGAAGAGAGAGTTCCAGCCTCATGTC AACACAGTGTCAGTGGTGAAACAAGTTGTCTCCCAACAGAAGAACATGTCTATAAGGAAT GGCAATTGTTTGGATGAGTCAAGAAAAGTCAGTCAGCAGCATGATGCAAAGTCCATGCAA AGAGTCAATATGGTGCAGAGAGTTAGAACTAAGTCAACACCGATTGCTGCGATGCAAAGA GTTGATCCGCCTTCATCTGAGAAGGCAGTGATGCAAAGAGCTAATCCTGCGCCCACAAAG GTTATGCAAGGGGTTGAAGCTGCACCTGTGAAGTCAATGCAGAGAGCTAATCCCACGTCC ACAAAGGTGATGCAAGAGGTTGAAGCTACACCTGTGAAAGCAATGCAAATAGCTGGCCAT ATCACTCTTTCGAAAGTGTTCAACAGAGAGAGTACTCAAGTTCAGTTGAGGAAAGAAACA GGAGGTCCCCTACTTGGGGGCCAGCTTAACACAGGGCGACCTACTCTGCTAAACAAGCCC AAGGTGTGTGCTGATCCACCTATCTTGTTAAGCAAGCCGGAGATGTTGTGTGTTGAGCCA CCTGGCTTGTTGAACAAACCGAAGGCGCATGTCGAACCACCTGTTGTCAAGCAGCAGCAA CAGATTGTGCCCGAAGCACAAGAAGAGCCTTGTTCTGTTGGAAGTGTCTTGGCAGCAGCA TCCCCAGTAACAGAGGCACAACAGTCCAGCTCTGACCGGAAAAGCCGCAAGGCTGAGAAG AAAGGGAGGAAGCTTGCAGATTTGTTTGTGAACTGGAAACCATCACCCACACAGATGGAA GATACAGATGTTGGTGACCAGGACTGGCTCTTCAGCTGCCGGGCGACCCCTAAAAATAAC TGCAGGACCTTCGATGGATCAGCAAGGTGTCAGCCTACCGAGCAGCTCTTCTCGCTGCAG CCCAGAGCAGTCCATTTGCCTGACCTTCTTATGTATCAGCTGCCGTTTGTTGTGCCTTTT TAG

Peptide Sequence

PEP ID	Os10t0124100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:1532800:1536184:1 gene:Os10g0124100 transcript:Os10t0124100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0124100-01)
Sequence	MARCFPYTRNPVAESMSSAAAAAVEPGIDKLQKEREMMQKKEKKERKKEKRRQKKAAQLG EKYETDDHHSKHGHKKRKHSGCEIVGEETRKVCNVTMEHLEKSSLSEEHEAPSYSQALRC TPESSLDSTKRLRTEVSSSPSQTRNGVNIRVKFTPTNQRRDPEATTGMSMKPRVTEQSPV KETGMDLSMANRKREFQPHVNTVSVVKQVVSQQKNMSIRNGNCLDESRKVSQQHDAKSMQ RVNMVQRVRTKSTPIAAMQRVDPPSSEKAVMQRANPAPTKVMQGVEAAPVKSMQRANPTS TKVMQEVEATPVKAMQIAGHITLSKVFNRESTQVQLRKETGGPLLGGQLNTGRPTLLNKP KVCADPPILLSKPEMLCVEPPGLLNKPKAHVEPPVVKQQQQIVPEAQEEPCSVGSVLAAA SPVTEAQQSSSDRKSRKAEKKGRKLADLFVNWKPSPTQMEDTDVGDQDWLFSCRATPKNN CRTFDGSARCQPTEQLFSLQPRAVHLPDLLMYQLPFVVPF

Transcript Sequence

Transcript ID	Os10t0124100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:1532800:1536184:1 gene:Os10g0124100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0124100-01)
Sequence	GAACCGAATCCCCTCCTCTCGAATCTTTCCTCCTCTCTCGCCTCGCCGGCGAAACCCTAG CCCAGCTGCGGCGGCGGCGGCGAGACCGAGAGAGAGAGGCCGGAGAGATTTTGTGGGGAG GAGGAGGATTGGTTGACGGTAGGGCGGGGGGGACATGGCGAGGTGCTTCCCGTACACGCG TAACCCCGTGGCGGAGTCGATGTCTTCGGCGGCGGCGGCGGCGGTTGAGCCGGGGATCGA TAAGCTCCAGAAAGAAAGGGAAATGATGCAAAAGAAGGAAAAGAAGGAAAGGAAGAAAGA GAAAAGGAGACAAAAGAAAGCTGCCCAGCTGGGTGAGAAATATGAGACAGATGATCATCA CTCTAAGCATGGCCATAAGAAGAGAAAGCACTCAGGCTGTGAAATAGTTGGCGAGGAGAC AAGAAAAGTTTGTAATGTTACCATGGAGCATTTGGAGAAGAGCAGTCTTTCTGAAGAGCA TGAGGCTCCTTCCTACAGTCAGGCTTTGCGTTGTACCCCAGAGAGCTCACTGGACAGCAC TAAGAGGCTGAGGACTGAAGTGTCAAGTAGCCCTAGTCAAACCAGAAATGGTGTTAACAT TCGTGTAAAGTTTACACCTACAAATCAAAGAAGAGACCCAGAAGCAACAACAGGAATGTC AATGAAACCAAGAGTTACTGAACAATCACCAGTCAAAGAAACCGGAATGGATCTGTCCAT GGCCAATAGGAAGAGAGAGTTCCAGCCTCATGTCAACACAGTGTCAGTGGTGAAACAAGT TGTCTCCCAACAGAAGAACATGTCTATAAGGAATGGCAATTGTTTGGATGAGTCAAGAAA AGTCAGTCAGCAGCATGATGCAAAGTCCATGCAAAGAGTCAATATGGTGCAGAGAGTTAG AACTAAGTCAACACCGATTGCTGCGATGCAAAGAGTTGATCCGCCTTCATCTGAGAAGGC AGTGATGCAAAGAGCTAATCCTGCGCCCACAAAGGTTATGCAAGGGGTTGAAGCTGCACC TGTGAAGTCAATGCAGAGAGCTAATCCCACGTCCACAAAGGTGATGCAAGAGGTTGAAGC TACACCTGTGAAAGCAATGCAAATAGCTGGCCATATCACTCTTTCGAAAGTGTTCAACAG AGAGAGTACTCAAGTTCAGTTGAGGAAAGAAACAGGAGGTCCCCTACTTGGGGGCCAGCT TAACACAGGGCGACCTACTCTGCTAAACAAGCCCAAGGTGTGTGCTGATCCACCTATCTT GTTAAGCAAGCCGGAGATGTTGTGTGTTGAGCCACCTGGCTTGTTGAACAAACCGAAGGC GCATGTCGAACCACCTGTTGTCAAGCAGCAGCAACAGATTGTGCCCGAAGCACAAGAAGA GCCTTGTTCTGTTGGAAGTGTCTTGGCAGCAGCATCCCCAGTAACAGAGGCACAACAGTC CAGCTCTGACCGGAAAAGCCGCAAGGCTGAGAAGAAAGGGAGGAAGCTTGCAGATTTGTT TGTGAACTGGAAACCATCACCCACACAGATGGAAGATACAGATGTTGGTGACCAGGACTG GCTCTTCAGCTGCCGGGCGACCCCTAAAAATAACTGCAGGACCTTCGATGGATCAGCAAG GTGTCAGCCTACCGAGCAGCTCTTCTCGCTGCAGCCCAGAGCAGTCCATTTGCCTGACCT TCTTATGTATCAGCTGCCGTTTGTTGTGCCTTTTTAGGTTATAAGTTTAGATTTAGATGA GTGACGGTTGTAAGTAGCTTAATGGGCAGTGGACAACAAGAAGCTGTGAAGCTTTGTGGG AACTGGGAGCCGTGTTTCCTTGCTTCAGTTTTCCAGCTTATATGTTCTGTTGTATGAAAA TCATTAAATCAGTGGAGATAATAACAAGCGAAAAAAAACT