Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0116800-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:1082947:1084984:1 gene:Os10g0116800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 3B description:Similar to Purple acid phosphatase. (Os10t0116800-01)
Sequence

ATGGCTGTTGCACTCGCGCTCTTGGCTGCCATGTCGGCGCTCTCGTCGTGCACAAGTCCG
GCCACCGCAGAGCTCACACGGCACGAGCACCCGGTGGCCGCCGGCGCGCCGCTGCGCCTC
CTCGTCGTCGGCGACTGGGGCCGGAAGGGCGGCTACAACCAGACAAGAGTTGCAGAACAG
ATGGGGAAGGTTGCGGAGGAGACGGAGATCGACTTCGTCGTGTCAACCGGCGACAACTTC
TTGGAGAACGGCCTCGCCGGCGTCGACGACATGGCGTTCCATGACTCCTTCATGGATGTC
TACACGGCTCAGAGCTTGCACAAGCCATGGTACCTTGTTCTTGGAAACCATGACTACAGG
GGAAATGTGCTAGCACAGATTGACCCAGCTCTGAGGAAGATCGACAGCAGGTTCATCTGC
ATGAGATCCTTCATTGTCAGTGCAGGAATTGTCGATTTCTTCTTTGTCGACACGACCCCG
TTTCAGCTCCAGTACTGGACTGATCCTGGAGAAGATCACTATGACTGGAGGGGAGTCGCG
CCTCGGGATGCGTACATCGCCAATCTCCTCGAGGATGTTGATGCTGCAATGAAGAAATCA
ACTGCAACATGGAAGATAGCTGTAGGACATCATACCATGAGGAGTGTGAGTGCCCATGGA
GACACCCAGGAGCTCCTTGAGCTTCTCCTTCCTGTCCTCAAGGAAAACGGTGTCGATTTC
TACATCAATGGGCATGATCACTGCCTGGAGCACATCAGCAGCAGAAACAGTCCAATTCAG
TACTTCACTAGTGGAGGCGGATCAAAGGCATGGAGAGGCATTTTTCAACAAAACGAAGAC
AAGCTCCAGTTCTTCTATGATGGACAAGGGTTCCTGTCACTTGAGCTCAGTGAGAACCGA
GCTCGATTCGCCTTCTACGACGTTTTCGGTGAAGCTTTGTACCACTGGAGCTTCAGCAAA
GCTAATCTGCAGAAGGTTCAGTCCTCTGCTAGTGTAACTGAAGAATGA

Peptide Sequence

PEP ID

Os10t0116800-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:1082947:1084984:1 gene:Os10g0116800 transcript:Os10t0116800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 3B description:Similar to Purple acid phosphatase. (Os10t0116800-01)
Sequence

MAVALALLAAMSALSSCTSPATAELTRHEHPVAAGAPLRLLVVGDWGRKGGYNQTRVAEQ
MGKVAEETEIDFVVSTGDNFLENGLAGVDDMAFHDSFMDVYTAQSLHKPWYLVLGNHDYR
GNVLAQIDPALRKIDSRFICMRSFIVSAGIVDFFFVDTTPFQLQYWTDPGEDHYDWRGVA
PRDAYIANLLEDVDAAMKKSTATWKIAVGHHTMRSVSAHGDTQELLELLLPVLKENGVDF
YINGHDHCLEHISSRNSPIQYFTSGGGSKAWRGIFQQNEDKLQFFYDGQGFLSLELSENR
ARFAFYDVFGEALYHWSFSKANLQKVQSSASVTEE

Transcript Sequence

Transcript ID

Os10t0116800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:1082947:1084984:1 gene:Os10g0116800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 3B description:Similar to Purple acid phosphatase. (Os10t0116800-01)
Sequence

ATCAGCCATGGCTGTTGCACTCGCGCTCTTGGCTGCCATGTCGGCGCTCTCGTCGTGCAC
AAGTCCGGCCACCGCAGAGCTCACACGGCACGAGCACCCGGTGGCCGCCGGCGCGCCGCT
GCGCCTCCTCGTCGTCGGCGACTGGGGCCGGAAGGGCGGCTACAACCAGACAAGAGTTGC
AGAACAGATGGGGAAGGTTGCGGAGGAGACGGAGATCGACTTCGTCGTGTCAACCGGCGA
CAACTTCTTGGAGAACGGCCTCGCCGGCGTCGACGACATGGCGTTCCATGACTCCTTCAT
GGATGTCTACACGGCTCAGAGCTTGCACAAGCCATGGTACCTTGTTCTTGGAAACCATGA
CTACAGGGGAAATGTGCTAGCACAGATTGACCCAGCTCTGAGGAAGATCGACAGCAGGTT
CATCTGCATGAGATCCTTCATTGTCAGTGCAGGAATTGTCGATTTCTTCTTTGTCGACAC
GACCCCGTTTCAGCTCCAGTACTGGACTGATCCTGGAGAAGATCACTATGACTGGAGGGG
AGTCGCGCCTCGGGATGCGTACATCGCCAATCTCCTCGAGGATGTTGATGCTGCAATGAA
GAAATCAACTGCAACATGGAAGATAGCTGTAGGACATCATACCATGAGGAGTGTGAGTGC
CCATGGAGACACCCAGGAGCTCCTTGAGCTTCTCCTTCCTGTCCTCAAGGAAAACGGTGT
CGATTTCTACATCAATGGGCATGATCACTGCCTGGAGCACATCAGCAGCAGAAACAGTCC
AATTCAGTACTTCACTAGTGGAGGCGGATCAAAGGCATGGAGAGGCATTTTTCAACAAAA
CGAAGACAAGCTCCAGTTCTTCTATGATGGACAAGGGTTCCTGTCACTTGAGCTCAGTGA
GAACCGAGCTCGATTCGCCTTCTACGACGTTTTCGGTGAAGCTTTGTACCACTGGAGCTT
CAGCAAAGCTAATCTGCAGAAGGTTCAGTCCTCTGCTAGTGTAACTGAAGAATGAGAGAA
GCTGGAGCCTTCAGAATACATTCCCACACAGCTGAGTAGATGTCTACCTGCATAATTCTA
CTTGTACAATTATGTCACATTGTGCTCATCAATACTGGATTTGCTATGAATTAGCAAGTG
TTTGATTCTACTAGAGAAAGATCACAGAATGAAGCAGGTGTTTTTGCACGAAGCC