Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0113100-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:869538:870880:1 gene:Os10g0113100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldo/keto reductase family protein. (Os10t0113100-01);Similar to cDNA clone:J033143K18, full insert sequence. (Os10t0113100-02)
Sequence

GTGCCTGCGAGCGCGCTGCTCCCGACCATGCCGCGCATCGGCATGGGCACGGCGGCGTTC
CCCTTCACCTCCTCCGAGGAAACCACGGCGGCGCTGCTCCGCGCCATCGAGCTCGGCTAC
CGCCACTTCGACACGGCGAGGCTGTACGCGACGGAGGGCTGCGTCAGCGAGGCCGTCGCG
GAGGCCGTCCGGCGCGGCCTCGTCGCCTCCCGCGCCGACGTGTTCGTCACCTCCAAGCTC
TGGTGCAGCGACCTGCACGCCGGCCGCGTCGTGCCGGCGGCGAGGGAGACGCTCCGCAAC
CTCGGAATGGACTACGTCGACCTGCTCCTCGTCCACTGGCCGGCGACCGTGGCGCCGGGC
AGCTACGACTTCCCGTTCCCCAAGGAGGAGATGGCGCCGGCGTTCGACATGGAGGGCGTG
TGGCGCGGCATGGAGGAGTGCCACCGGCTGGGCCTCGCGCGCGCCATCGGCGTCAGTAAC
TTCTCCGCCAAGAAGCTGGAGCAGCTGCTGTCGTTCGCCGTGGTTCGGCCGGCGGCGAAC
CAGGTGGAGATGAACCCGATGTGGCAGCAGAGGACGCTGCGGGAGGTGTGCCGGCGAGAG
GGGGTGCAGCTGTGCGGGTACTCGCCGCTGGGGGCGAAGGGCACGCCGTGGGGCAGCGCC
GCGGTGATGGACTCCGGCGTCCTGCACGACATCGCCCAAACCAAGGGCAAGACGCTTGCT
CAGATTTGTTTGAGGTGGATGTACGAGCAGGGTGATGTTTTGTTAGTGAAGACATACAAT
GAAAATAGGATGAAGGAGAATCTTGATATTTTCGACTGGGAGCTCACTGAGGAAGAGAGA
GACAAAATCAGCAAACTCCCCCAGCAGAGGGGTCTGACTGGAATGCAGTTCGTCTGTGAC
AATGGGCCTTACAAGTGCGTCGAAGATTTGTGGGATGGTGCTTAA

Peptide Sequence

PEP ID

Os10t0113100-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:869538:870880:1 gene:Os10g0113100 transcript:Os10t0113100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldo/keto reductase family protein. (Os10t0113100-01);Similar to cDNA clone:J033143K18, full insert sequence. (Os10t0113100-02)
Sequence

VPASALLPTMPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVA
EAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATVAPG
SYDFPFPKEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAAN
QVEMNPMWQQRTLREVCRREGVQLCGYSPLGAKGTPWGSAAVMDSGVLHDIAQTKGKTLA
QICLRWMYEQGDVLLVKTYNENRMKENLDIFDWELTEEERDKISKLPQQRGLTGMQFVCD
NGPYKCVEDLWDGA

Transcript Sequence

Transcript ID

Os10t0113100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:869538:870880:1 gene:Os10g0113100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldo/keto reductase family protein. (Os10t0113100-01);Similar to cDNA clone:J033143K18, full insert sequence. (Os10t0113100-02)
Sequence

GGTGCCTGCGAGCGCGCTGCTCCCGACCATGCCGCGCATCGGCATGGGCACGGCGGCGTT
CCCCTTCACCTCCTCCGAGGAAACCACGGCGGCGCTGCTCCGCGCCATCGAGCTCGGCTA
CCGCCACTTCGACACGGCGAGGCTGTACGCGACGGAGGGCTGCGTCAGCGAGGCCGTCGC
GGAGGCCGTCCGGCGCGGCCTCGTCGCCTCCCGCGCCGACGTGTTCGTCACCTCCAAGCT
CTGGTGCAGCGACCTGCACGCCGGCCGCGTCGTGCCGGCGGCGAGGGAGACGCTCCGCAA
CCTCGGAATGGACTACGTCGACCTGCTCCTCGTCCACTGGCCGGCGACCGTGGCGCCGGG
CAGCTACGACTTCCCGTTCCCCAAGGAGGAGATGGCGCCGGCGTTCGACATGGAGGGCGT
GTGGCGCGGCATGGAGGAGTGCCACCGGCTGGGCCTCGCGCGCGCCATCGGCGTCAGTAA
CTTCTCCGCCAAGAAGCTGGAGCAGCTGCTGTCGTTCGCCGTGGTTCGGCCGGCGGCGAA
CCAGGTGGAGATGAACCCGATGTGGCAGCAGAGGACGCTGCGGGAGGTGTGCCGGCGAGA
GGGGGTGCAGCTGTGCGGGTACTCGCCGCTGGGGGCGAAGGGCACGCCGTGGGGCAGCGC
CGCGGTGATGGACTCCGGCGTCCTGCACGACATCGCCCAAACCAAGGGCAAGACGCTTGC
TCAGATTTGTTTGAGGTGGATGTACGAGCAGGGTGATGTTTTGTTAGTGAAGACATACAA
TGAAAATAGGATGAAGGAGAATCTTGATATTTTCGACTGGGAGCTCACTGAGGAAGAGAG
AGACAAAATCAGCAAACTCCCCCAGCAGAGGGGTCTGACTGGAATGCAGTTCGTCTGTGA
CAATGGGCCTTACAAGTGCGTCGAAGATTTGTGGGATGGTGCTTAACATGTCGCAGGCTG
GCCCTATGCACCAATAATCTGGATGGATCATGCTTGCTGGGGATCTAGCAAAATAATTTG
TAATTCAATTTTAATCTTCTGTCTTCTCGCAAAATAATTGTGTGAAATGGAGCGCCAGAT
GTGCTCAATTGTT