Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0108700-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:583210:584657:1 gene:Os10g0108700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACYLTRANSFERASE 15 description:Transferase family protein. (Os10t0108700-01);Transferase family protein. (Os10t0108700-02)
Sequence

ATGAGTATTGTGGTGAGCAAGTCAGCGCCGGTGGTCGTCCGGCCATCGGAGCCGGCCACA
TCGACGGCCGACAAGATCCTTCTGTCAACTTTGGACAAGCCTGTTGCCACGATACCAGTG
ACCGTGCTACTTGCGTTCGACCACCCCATCCATGACGCCACCGCGGAGACCATCAAGACG
GCTCTCGCTCAATCACTCGTCCACTACTATCCTATCGCCGGCCGCATTTCCTGCGACAAT
GACGACGGCGGCCATTTCTACATCGACTGCACCGGCGAGGATCTCGGGGTCACGTTCGTG
GCCGCGTCCGCCAACTGCACCATGGAGGAGCTCATGTGTCTCGTCGACGACCAGGCTCCC
GACGACGAGACAGCGGTGGTGCAGCAGCTCGCCTTCAACTGCACGCCCGACGACCTTCAT
CACCGTCTGCTGTGGGTGCAGGTCACCACTCTCAACTGTGGAGGCTTCGTCGTCGGGGTG
ACATGGAGCCATGGCGTGGCTGACGGTCCCGGCATAGCACAGTTCATACAAGCCGTCGGC
GAGCTCGCCCGTGGCCTGCCATCGCCGTCCGTCGTCCCGGTCAGGTTGGACGACAAGATC
GCAACCCAAGCCGTACCTCCCTTCACCATGGCCGTTCATCGCTTCATATCCGGCCTCAAG
CCAGTATCAAACCTCGACGTACGCAACGTCACCGTCTCATCTAGCCTTATCAACCACATC
ATCGTCGGAGCTCGTCGTCGTGCCACCGTGTTCGAGGCGGTCGCCGCCGTGCTCTGGCAG
TGCCGTACACGGGTGGTGATGACGGATCCTGAGGCCCCCGCCGTGCTGCTCTTCGCGGTG
AACGCACGCAAGTACCTCGGCGCCAAGGACGGCTACTACGGATGCTGCACCGCCATGCAC
ATGGCCGTGTCCAAGTCCGGCACGGTGGCCAACGGCGACATCATGAAGTTGGTCGGCATC
ATACGCCGCGCCAAGGAGCAGATACCGGAGCAGCTGAAGGCAGACGACGGCGAGATGATG
CTACGGACGATGGTAGGGGAGAAGCAGGTGAATGGATACGAGAGCCTGCTCTACTTGACA
TCCTGGCGAAACATCGGGTTCGAGGACGTCGATTTCGGCAGCGGGAAGACGGCGAGGGTG
ATGACCTACCCGCCGAGGATGCTGTCCATGATGCCCAGGATTGCGCCCATCTGCTTCATG
CTCAAGGCCACAGAGGAAGGGGTCAGGGTCATGTCAGACTGTGTTACGGCTGACCACGCC
GATGCCTTCTATCAAGAAATAGCCAAGCTCAAAGCCACCACCTGA

Peptide Sequence

PEP ID

Os10t0108700-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:583210:584657:1 gene:Os10g0108700 transcript:Os10t0108700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACYLTRANSFERASE 15 description:Transferase family protein. (Os10t0108700-01);Transferase family protein. (Os10t0108700-02)
Sequence

MSIVVSKSAPVVVRPSEPATSTADKILLSTLDKPVATIPVTVLLAFDHPIHDATAETIKT
ALAQSLVHYYPIAGRISCDNDDGGHFYIDCTGEDLGVTFVAASANCTMEELMCLVDDQAP
DDETAVVQQLAFNCTPDDLHHRLLWVQVTTLNCGGFVVGVTWSHGVADGPGIAQFIQAVG
ELARGLPSPSVVPVRLDDKIATQAVPPFTMAVHRFISGLKPVSNLDVRNVTVSSSLINHI
IVGARRRATVFEAVAAVLWQCRTRVVMTDPEAPAVLLFAVNARKYLGAKDGYYGCCTAMH
MAVSKSGTVANGDIMKLVGIIRRAKEQIPEQLKADDGEMMLRTMVGEKQVNGYESLLYLT
SWRNIGFEDVDFGSGKTARVMTYPPRMLSMMPRIAPICFMLKATEEGVRVMSDCVTADHA
DAFYQEIAKLKATT

Transcript Sequence

Transcript ID

Os10t0108700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:583210:584657:1 gene:Os10g0108700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACYLTRANSFERASE 15 description:Transferase family protein. (Os10t0108700-01);Transferase family protein. (Os10t0108700-02)
Sequence

AGAACACCCAGACGGATATTAATTTAGAATGAGTATTGTGGTGAGCAAGTCAGCGCCGGT
GGTCGTCCGGCCATCGGAGCCGGCCACATCGACGGCCGACAAGATCCTTCTGTCAACTTT
GGACAAGCCTGTTGCCACGATACCAGTGACCGTGCTACTTGCGTTCGACCACCCCATCCA
TGACGCCACCGCGGAGACCATCAAGACGGCTCTCGCTCAATCACTCGTCCACTACTATCC
TATCGCCGGCCGCATTTCCTGCGACAATGACGACGGCGGCCATTTCTACATCGACTGCAC
CGGCGAGGATCTCGGGGTCACGTTCGTGGCCGCGTCCGCCAACTGCACCATGGAGGAGCT
CATGTGTCTCGTCGACGACCAGGCTCCCGACGACGAGACAGCGGTGGTGCAGCAGCTCGC
CTTCAACTGCACGCCCGACGACCTTCATCACCGTCTGCTGTGGGTGCAGGTCACCACTCT
CAACTGTGGAGGCTTCGTCGTCGGGGTGACATGGAGCCATGGCGTGGCTGACGGTCCCGG
CATAGCACAGTTCATACAAGCCGTCGGCGAGCTCGCCCGTGGCCTGCCATCGCCGTCCGT
CGTCCCGGTCAGGTTGGACGACAAGATCGCAACCCAAGCCGTACCTCCCTTCACCATGGC
CGTTCATCGCTTCATATCCGGCCTCAAGCCAGTATCAAACCTCGACGTACGCAACGTCAC
CGTCTCATCTAGCCTTATCAACCACATCATCGTCGGAGCTCGTCGTCGTGCCACCGTGTT
CGAGGCGGTCGCCGCCGTGCTCTGGCAGTGCCGTACACGGGTGGTGATGACGGATCCTGA
GGCCCCCGCCGTGCTGCTCTTCGCGGTGAACGCACGCAAGTACCTCGGCGCCAAGGACGG
CTACTACGGATGCTGCACCGCCATGCACATGGCCGTGTCCAAGTCCGGCACGGTGGCCAA
CGGCGACATCATGAAGTTGGTCGGCATCATACGCCGCGCCAAGGAGCAGATACCGGAGCA
GCTGAAGGCAGACGACGGCGAGATGATGCTACGGACGATGGTAGGGGAGAAGCAGGTGAA
TGGATACGAGAGCCTGCTCTACTTGACATCCTGGCGAAACATCGGGTTCGAGGACGTCGA
TTTCGGCAGCGGGAAGACGGCGAGGGTGATGACCTACCCGCCGAGGATGCTGTCCATGAT
GCCCAGGATTGCGCCCATCTGCTTCATGCTCAAGGCCACAGAGGAAGGGGTCAGGGTCAT
GTCAGACTGTGTTACGGCTGACCACGCCGATGCCTTCTATCAAGAAATAGCCAAGCTCAA
AGCCACCACCTGATTATAACTATATATGCGAGCTATCTATACCTTCTTCAATATGCCAAT
TATGATTTATCTACAATAAAAATTTGAATATATATACCGTGCAAGAGCATGCATGAACAA
GTAATTCT