Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0104900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:377147:385343:-1 gene:Os10g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHROMOMETHYLTRANSFERASE 2 description:Chromomethylase, Plant development, Silencing of transposable elements (TEs) (Os10t0104900-01)
Sequence	ATGGCGCCCAGCTCCCCGTCCTCCGCCGCCGCGCCCACGCGTACCTCCACGCGTAAGCGC GCCGCCTCCGCCTCCGCCTCCGCCAAGGCCACCGACGAGCCCTCCACCAAGCGCACCCGC AGGCCCAAGGCGGAGACCAAGCCCAGGAAGAAGAAGGACGAGGTAAAGGAGGAGGAGAAG CCGCCCATGGAGGACGACGCCTGCGGGGAGGAGCCGGATGCGGAGGAGATGGCCTTGGGG GAGGAAGCCGAGGCCGAGGAGGCGGAGGCGGAGCAGAAGCAGCTGGACGCCCCCGCCCCC GGTGTGGCGAGGAAGCGGGTGGCGCAGCCCAGCAGGGTCCGACACGGCAGCGACGGCGAC CACGACCCGGAGTTCGTCGGCGACCCCTTCCCCGCCAAGGAGGCGCGCGACAAGTGGCCG CAGCGCTACCAGCGCAACGCCGCCACCAGGAGGCCCGATGAGGAGGAGGACATCAAGGCG CGCTGCCACTACAGCTCCGCCAAGGTCGATGGCACGCTCTACTGCCTCCACGACGACGTC TATGTCAAGGCTGAGGAAGATAAGGCCGACTACATCGGTAGAATTACTGAGTTCTTTGAG GGGACTGACCACTGCCACTATTTTACCTGCCGTTGGTTCTTTCGGGCGGAGGATACGGTC ATCTCATCCATAATGATGGAGAATGCTGATGATGAAAAGCATGATCTCAAGCGTGTTTTT CTTTCTGAAGAAAAGAATGACAATGTGCTTGATTGCATCATTTCAAAGGTTAAAATCGTG TATATTGATCCAAATATGGAATCAGAAGCCAAAGCTCGACGGTTGGCTGATTGTGATCTG TACTATGACATGTCGTACACCGTTGCTTATTCAACATTTGCTAATATCCCACTTGAAAAT GGAGCATCAGGCAGTGACACTGCATCAGATATTTCTTCTGATGATGTGGATTCTTCCAAA GGCAAAGTTGTCTCTGATTCAGAGGCATCTTCAGTGGGAAAGGCTACACTCCTTGATCTG TACTCTGGTTGTGGCGGTATGTCTACTGGGCTCTGTTTGGGTGCGGCACTTGCTGGACTC AATCTTGAAACGCGATGGGCTGTTGATTTCAATAGTTTTGCGTGCGAGAGTCTCAAGTAT AATCATCCAAGAACTGAGGTCCGGAATGAAAAGGCGGATGAGTTTCTTGCTCTTCTTAAG GGATGGCATAGCCTTTGTGATGAATATGTCAAGAAAGATATTGATTTCAGTTCAGCTGGT GCCTCAGAGAACGAAGAGGATGATGATGAGCCTCTTGAAAAGGATGAGTTTGTTGTGGAG AAACTAGCTGGAATCTGCTACGGTGGCAGTGGTAGAGAAGATGGCCTCTATTTCAAGGTA CAATGGAAAGGCTATGGCCGTGAAGAGGACACTTGGGAGCCTATTGAGAACCTCAGGGAT TGCCCATTGAAAATTAAAGAATTTGTGCAAGAAGGATACAGGAGAAAAATCTTGCCTCTT CCGGGTGATGTTGATGTCATTTGTGGTGGGCCACCATGCCAAGGAATAAGTGGTTTCAAT CGGTTCAGAAACCGCAAAGAGCCACTAAAAGACGAGAAAAACAAACAGATGGTGACATTC ATGGATATTGTGGCATACCTGAAGCCTAAGTATGTCCTGATGGAAAATGTTGTAGACATA CTGAAGTTTGCAGATGGTTACCTTGGACGTTATGCCTTGAGCCGTCTGGTGGCTATGAAG TACCAAGCACGACTTGGAATGATGGTTGCAGGTTGTTATGGCTTGCCACAATTTAGGATG CGTGTGTTCCTCTGGGGAGCTCTTCCTACCATGGTGCTGCCAAAGTATCCGCTTCCCACT CATAATGTTGTTGTCCGTGGTGGTGCCCCAAATGCTTTTTCTCAAAGTATTGTTGCATAC GATGAAACACAGAAGCCAACATTGAAAAATGCACTGCTGCTTGGCGATGCAATTTCGGAT TTGCCAGAGGTAAACAACCATCAGCCTAATGAAGTGATGGAATATGGTTCTTCCCCCAAA ACAGAATTCCAGCGCTATATCCGGCTTAGCCGTAAAGAAATGCTGGATAGTTCTTTTGAA GGGAAGGATGGTCCAGATCTAGGCAAGCTTTTGGATCACCAGCCCTTAAAGCTAAATAAG GATGACCATGAGCGTGTGCAGCAAATTCCAGTAAAGAAGGGAGCCAACTTCCGGGACCTG AAGGGTGTCAGGGTTGGGGCAAACAACATCGTGGAGTGGGATCCAGACGTTCCCCGTGTA TATTTATCTTCTGGCAAGCCTTTGGTTCCTGACTACGCGATGTCTTTCATCAAAGGGAGA TCACTGAAGCCATTTGGGCGCTTGTGGTGGGATGAGACGGTTCCTACAGTTGTGACCCGA GCAGAGCCACACAACCAGATTATATTGCATCCGAATCAGGCGAGAGTTCTGACCGTAAGG GAGAATGCAAGGTTGCAGGGGTTCCCAGACTACTACAAGATGTTTGGCCCTATCAAAGAG AAGTATATACAAGTTGGCAATGCAGTTGCTGTACCTGTTGCTCGTGCATTGGGTTACTCC CTTGGGCTTGCATACCAGCGTGAGTCGGAGGGGAGCAGCCCTCTGTTCGTCCTGCCAGAC AGCTTCACGGAAGTCGGGCGACAGGCGGCGCCGGCAAGAGCATCCTCTGTTGGTATCCCT GTTGGCGAGGTTGTTGAGCAATAG

Peptide Sequence

PEP ID	Os10t0104900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:377147:385343:-1 gene:Os10g0104900 transcript:Os10t0104900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHROMOMETHYLTRANSFERASE 2 description:Chromomethylase, Plant development, Silencing of transposable elements (TEs) (Os10t0104900-01)
Sequence	MAPSSPSSAAAPTRTSTRKRAASASASAKATDEPSTKRTRRPKAETKPRKKKDEVKEEEK PPMEDDACGEEPDAEEMALGEEAEAEEAEAEQKQLDAPAPGVARKRVAQPSRVRHGSDGD HDPEFVGDPFPAKEARDKWPQRYQRNAATRRPDEEEDIKARCHYSSAKVDGTLYCLHDDV YVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADDEKHDLKRVF LSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDMSYTVAYSTFANIPLEN GASGSDTASDISSDDVDSSKGKVVSDSEASSVGKATLLDLYSGCGGMSTGLCLGAALAGL NLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLALLKGWHSLCDEYVKKDIDFSSAG ASENEEDDDEPLEKDEFVVEKLAGICYGGSGREDGLYFKVQWKGYGREEDTWEPIENLRD CPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTF MDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRM RVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDAISD LPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLDSSFEGKDGPDLGKLLDHQPLKLNK DDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSSGKPLVPDYAMSFIKGR SLKPFGRLWWDETVPTVVTRAEPHNQIILHPNQARVLTVRENARLQGFPDYYKMFGPIKE KYIQVGNAVAVPVARALGYSLGLAYQRESEGSSPLFVLPDSFTEVGRQAAPARASSVGIP VGEVVEQ

Transcript Sequence

Transcript ID	Os10t0104900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:377147:385343:-1 gene:Os10g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHROMOMETHYLTRANSFERASE 2 description:Chromomethylase, Plant development, Silencing of transposable elements (TEs) (Os10t0104900-01)
Sequence	GAATCCTCCCTCCTTCGATTTCACGCGGATTTCTTCTTCTCTCCATTTCCTCTTCTCCAG GTTCTCCTGCTCCTAAACCCATCCAAAACCCTAGCAAGAGGAAGAGGCAGCAGCAGCCAT GGCGCCCAGCTCCCCGTCCTCCGCCGCCGCGCCCACGCGTACCTCCACGCGTAAGCGCGC CGCCTCCGCCTCCGCCTCCGCCAAGGCCACCGACGAGCCCTCCACCAAGCGCACCCGCAG GCCCAAGGCGGAGACCAAGCCCAGGAAGAAGAAGGACGAGGTAAAGGAGGAGGAGAAGCC GCCCATGGAGGACGACGCCTGCGGGGAGGAGCCGGATGCGGAGGAGATGGCCTTGGGGGA GGAAGCCGAGGCCGAGGAGGCGGAGGCGGAGCAGAAGCAGCTGGACGCCCCCGCCCCCGG TGTGGCGAGGAAGCGGGTGGCGCAGCCCAGCAGGGTCCGACACGGCAGCGACGGCGACCA CGACCCGGAGTTCGTCGGCGACCCCTTCCCCGCCAAGGAGGCGCGCGACAAGTGGCCGCA GCGCTACCAGCGCAACGCCGCCACCAGGAGGCCCGATGAGGAGGAGGACATCAAGGCGCG CTGCCACTACAGCTCCGCCAAGGTCGATGGCACGCTCTACTGCCTCCACGACGACGTCTA TGTCAAGGCTGAGGAAGATAAGGCCGACTACATCGGTAGAATTACTGAGTTCTTTGAGGG GACTGACCACTGCCACTATTTTACCTGCCGTTGGTTCTTTCGGGCGGAGGATACGGTCAT CTCATCCATAATGATGGAGAATGCTGATGATGAAAAGCATGATCTCAAGCGTGTTTTTCT TTCTGAAGAAAAGAATGACAATGTGCTTGATTGCATCATTTCAAAGGTTAAAATCGTGTA TATTGATCCAAATATGGAATCAGAAGCCAAAGCTCGACGGTTGGCTGATTGTGATCTGTA CTATGACATGTCGTACACCGTTGCTTATTCAACATTTGCTAATATCCCACTTGAAAATGG AGCATCAGGCAGTGACACTGCATCAGATATTTCTTCTGATGATGTGGATTCTTCCAAAGG CAAAGTTGTCTCTGATTCAGAGGCATCTTCAGTGGGAAAGGCTACACTCCTTGATCTGTA CTCTGGTTGTGGCGGTATGTCTACTGGGCTCTGTTTGGGTGCGGCACTTGCTGGACTCAA TCTTGAAACGCGATGGGCTGTTGATTTCAATAGTTTTGCGTGCGAGAGTCTCAAGTATAA TCATCCAAGAACTGAGGTCCGGAATGAAAAGGCGGATGAGTTTCTTGCTCTTCTTAAGGG ATGGCATAGCCTTTGTGATGAATATGTCAAGAAAGATATTGATTTCAGTTCAGCTGGTGC CTCAGAGAACGAAGAGGATGATGATGAGCCTCTTGAAAAGGATGAGTTTGTTGTGGAGAA ACTAGCTGGAATCTGCTACGGTGGCAGTGGTAGAGAAGATGGCCTCTATTTCAAGGTACA ATGGAAAGGCTATGGCCGTGAAGAGGACACTTGGGAGCCTATTGAGAACCTCAGGGATTG CCCATTGAAAATTAAAGAATTTGTGCAAGAAGGATACAGGAGAAAAATCTTGCCTCTTCC GGGTGATGTTGATGTCATTTGTGGTGGGCCACCATGCCAAGGAATAAGTGGTTTCAATCG GTTCAGAAACCGCAAAGAGCCACTAAAAGACGAGAAAAACAAACAGATGGTGACATTCAT GGATATTGTGGCATACCTGAAGCCTAAGTATGTCCTGATGGAAAATGTTGTAGACATACT GAAGTTTGCAGATGGTTACCTTGGACGTTATGCCTTGAGCCGTCTGGTGGCTATGAAGTA CCAAGCACGACTTGGAATGATGGTTGCAGGTTGTTATGGCTTGCCACAATTTAGGATGCG TGTGTTCCTCTGGGGAGCTCTTCCTACCATGGTGCTGCCAAAGTATCCGCTTCCCACTCA TAATGTTGTTGTCCGTGGTGGTGCCCCAAATGCTTTTTCTCAAAGTATTGTTGCATACGA TGAAACACAGAAGCCAACATTGAAAAATGCACTGCTGCTTGGCGATGCAATTTCGGATTT GCCAGAGGTAAACAACCATCAGCCTAATGAAGTGATGGAATATGGTTCTTCCCCCAAAAC AGAATTCCAGCGCTATATCCGGCTTAGCCGTAAAGAAATGCTGGATAGTTCTTTTGAAGG GAAGGATGGTCCAGATCTAGGCAAGCTTTTGGATCACCAGCCCTTAAAGCTAAATAAGGA TGACCATGAGCGTGTGCAGCAAATTCCAGTAAAGAAGGGAGCCAACTTCCGGGACCTGAA GGGTGTCAGGGTTGGGGCAAACAACATCGTGGAGTGGGATCCAGACGTTCCCCGTGTATA TTTATCTTCTGGCAAGCCTTTGGTTCCTGACTACGCGATGTCTTTCATCAAAGGGAGATC ACTGAAGCCATTTGGGCGCTTGTGGTGGGATGAGACGGTTCCTACAGTTGTGACCCGAGC AGAGCCACACAACCAGATTATATTGCATCCGAATCAGGCGAGAGTTCTGACCGTAAGGGA GAATGCAAGGTTGCAGGGGTTCCCAGACTACTACAAGATGTTTGGCCCTATCAAAGAGAA GTATATACAAGTTGGCAATGCAGTTGCTGTACCTGTTGCTCGTGCATTGGGTTACTCCCT TGGGCTTGCATACCAGCGTGAGTCGGAGGGGAGCAGCCCTCTGTTCGTCCTGCCAGACAG CTTCACGGAAGTCGGGCGACAGGCGGCGCCGGCAAGAGCATCCTCTGTTGGTATCCCTGT TGGCGAGGTTGTTGAGCAATAGAACACTTGGGTAGAGTAGAGTCATTATTTGGTTCGATT CGAACCGATCCGGGAGAATGTTGTTTAAAATCACTGATCAGCCACCTTGGTGCTGTCATG TGATCACCATCAATGTTATTATTGATTGATTGAATGTTGTAAGGCTGGTGGCACTCCTGC TTGAGTGCTTGTTGTACTTGTAGCATAAGGTCCAAAACATTCATTCATATCCTTCTATGG GCTATCTTATGTCTGTATCCTGATAGATTGTTTGTGTTCAATCATCATCTCACATTGTAT AGGCTGCCCCTGATATCATTGTTGCATCAACCTTGTGCTTTTTTGGGGCTTATTTGTTAG TCCCTCAATCTGAACTAGTAAAGTTGAAGTTTGGATGTTG