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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0104500-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:348893:355702:-1 gene:Os10g0104500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-175 description:Similar to Notchless-related. (Os10t0104500-01);Hypothetical conserved gene. (Os10t0104500-02)
Sequence

GGGGAACTTATATTATGGGACCCGAAAACAGGCAAGCAATTGGGGACTCCACTTACGGGG
CATAGGAAGTGGATTACTGCTGTATCTTGGGAGCCAGTTCATTTGCAATCTCCTTGCCGC
CGTTTTGTAAGTACAAGTAAGGATGGTGATGCACGTATTTGGGATATGACCACAAGGAAG
TGTGTCATTGCCCTTACAGGTCACACTAATTCAGTGACTTGTGTGAAGTGGGGTGGAGAT
GGTTTGATTTACACTGGTTCTGAAGATTGTTCAATCAAAGTGTGGGAAACTTCTCAGGGA
AAATTGGTCAAAACACTGCAGGGTCATGGTCACTGGGTCAATTCACTTGCTTTGAGCACC
GAGTATGTTTTGCGCACAGGGGCATATGACCATACTGGCAAGACATATTCAACAGCAGAG
GAAATGAAGGAGGCAGCTCTTGCGAGATACAAGAAGATGAGGGGCAATGCACCTGAGAGA
CTAGTTTCTGGTTCTGATGATTTTACGATGTTTCTCTGGGAACCAACAATTAGTAAACAG
CCCAAAGCCCGCATGACTGGTCATCAAAAGCTCGTAAACCATGTCTACTTCTCTCCTGAC
GGGCAGTGGCTGGCAAGTGCCTCCTTTGACAAATCTGTCAAGTTATGGAATGGTATTACA
GGCAAATTTGTTGCAGCTTTCAGAGGGCATGTTGCAGATGTCTACCAGATCAGCTGGTCT
GCTGACAGTAGGCTTCTATTGAGTGGAAGCAAGGATTCCACCCTAAAGGTCTGGGATATT
CGAACACGCAAGTTGAAACAGGATTTGCCAGGGCACGCAGATGAGGTGTACGCTGTGGAT
TGGAGCCCTGACGGCGAGAAGGTTGCATCTGGAGGCAAGGACAGGGTCCTCAAGCTATGG
ATGAACTAG

Peptide Sequence

PEP ID

Os10t0104500-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:348893:355702:-1 gene:Os10g0104500 transcript:Os10t0104500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-175 description:Similar to Notchless-related. (Os10t0104500-01);Hypothetical conserved gene. (Os10t0104500-02)
Sequence

GELILWDPKTGKQLGTPLTGHRKWITAVSWEPVHLQSPCRRFVSTSKDGDARIWDMTTRK
CVIALTGHTNSVTCVKWGGDGLIYTGSEDCSIKVWETSQGKLVKTLQGHGHWVNSLALST
EYVLRTGAYDHTGKTYSTAEEMKEAALARYKKMRGNAPERLVSGSDDFTMFLWEPTISKQ
PKARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWNGITGKFVAAFRGHVADVYQISWS
ADSRLLLSGSKDSTLKVWDIRTRKLKQDLPGHADEVYAVDWSPDGEKVASGGKDRVLKLW
MN

Transcript Sequence

Transcript ID

Os10t0104500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:348893:355702:-1 gene:Os10g0104500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-175 description:Similar to Notchless-related. (Os10t0104500-01);Hypothetical conserved gene. (Os10t0104500-02)
Sequence

GGGGAACTTATATTATGGGACCCGAAAACAGGCAAGCAATTGGGGACTCCACTTACGGGG
CATAGGAAGTGGATTACTGCTGTATCTTGGGAGCCAGTTCATTTGCAATCTCCTTGCCGC
CGTTTTGTAAGTACAAGTAAGGATGGTGATGCACGTATTTGGGATATGACCACAAGGAAG
TGTGTCATTGCCCTTACAGGTCACACTAATTCAGTGACTTGTGTGAAGTGGGGTGGAGAT
GGTTTGATTTACACTGGTTCTGAAGATTGTTCAATCAAAGTGTGGGAAACTTCTCAGGGA
AAATTGGTCAAAACACTGCAGGGTCATGGTCACTGGGTCAATTCACTTGCTTTGAGCACC
GAGTATGTTTTGCGCACAGGGGCATATGACCATACTGGCAAGACATATTCAACAGCAGAG
GAAATGAAGGAGGCAGCTCTTGCGAGATACAAGAAGATGAGGGGCAATGCACCTGAGAGA
CTAGTTTCTGGTTCTGATGATTTTACGATGTTTCTCTGGGAACCAACAATTAGTAAACAG
CCCAAAGCCCGCATGACTGGTCATCAAAAGCTCGTAAACCATGTCTACTTCTCTCCTGAC
GGGCAGTGGCTGGCAAGTGCCTCCTTTGACAAATCTGTCAAGTTATGGAATGGTATTACA
GGCAAATTTGTTGCAGCTTTCAGAGGGCATGTTGCAGATGTCTACCAGATCAGCTGGTCT
GCTGACAGTAGGCTTCTATTGAGTGGAAGCAAGGATTCCACCCTAAAGGTCTGGGATATT
CGAACACGCAAGTTGAAACAGGATTTGCCAGGGCACGCAGATGAGGTGTACGCTGTGGAT
TGGAGCCCTGACGGCGAGAAGGTTGCATCTGGAGGCAAGGACAGGGTCCTCAAGCTATGG
ATGAACTAGTTCCCTTAGAGTTAAGGTACTTAGCTAGTAGCTTCTTGTCATGGTGGCTCT
CTCTTGTTCTTGGTGAGAGATTTTGTAGGGTTGGGTTGGCATTTCTTGTTTTTATTTTGC
AACCAAAGGCTTGAGGGTTTATAGCTGGTTTTTTTTAGATAATGGAATATAATATTCCGG
TTTTTGTTC