Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0100500-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:67119:72969:1 gene:Os10g0100500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 285 description:Serine/threonine protein kinase-related domain containing protein. (Os10t0100500-01);Similar to predicted protein. (Os10t0100500-02)
Sequence	ATGGAGATACTTAGCCCGTCGCCGCCGCCCAGCCCCGGCCCCGCCTCCGCCTCCGCCTCC GCCTCCGGCTCCGCCATGGATTCCTTCATCCACAGAGGTGCCGGCTGGCATTTCCCCCGC CGCGACAACGTCGACGCGCGGGTCCATGTCGCCGTCGGGAGGTCGCCGGAGAAGACGTTG GGCCTGCTGCGATGGGCCTTCCGCCGCTTCGCCTGCGCCCAAGTCGTCCTCGTGCACGTC CACCAACCTTCTCCGCTCATCCCTACCCTCTTAGGCAAGATTCCTGCCGCTCAAGCCACC GAAGAGCTCGTGCTGTCGCATCGCAAATCCGAGAAGGACGAAATGAACAAGATCCTCCTC ACCTACCTCACTTTCTGTCACAGGGCACAGGTTCAGGCAAGTCTTCTTGTCACGGAGAAT GAACAAATCCATGATGGTATTATCACTTTGGTCAAAGATCATGGGATTACAAAGCTTGTC ATGGGTTCTACACCTGATACTTGCTTCAAGTTGAAAGCGAGCTATGGCAAAGCATCTTTT ATGGCAAGGAATGCCCCATCATTTTGTGAAATCTGGTTTGTTTGGAGAGGAAGACACATT TGGACCAGAGAAGCAGCTGCAGCCATTGGCAACAATATCTCAGTTTACAATGAAGATGAT GTTATGATCAGGAAAAGAATCAGGTTCAGCTCTACTAGTAACAATGCTGAATCCATACTT GATGAAGGATACATTTCATACGAGGCACAAACACCTGCTGATCGTTATGAAATCACCATT TCAGATAATGGTCAACCGAATGATTATGAATCTCTTGTTGATGCCAACCATTTCTGCAAT ATTATTGTACCAAATTTGCAAAATGCACAGTCTGCATTTAACTCAACATTCCAGCCTGGT TCTTCTGTAGACATGGAATCATTAGTGTTATATCCTCAGGAAATCTTGGATAAAAATTTC AAGCAGGTCATTCTAGAAGCAGAGAGATCAAGGAAGGATGCTTTTGTTGAGCTTCTCAAG CGCAAAGATACAGAGTCAAGAGTAGCCGGTGTTATTGCCAGGGCAAAAGCTTCTGAGTTC GCTCAAAAACAAGAAATGAAAATGCGGGAGGAACTTGAAGCTTTGTTGACAGCCACAAAA AAGCAGCATGAAGATCTTGCAGAAAATAAAGAAAAGGCTACAGAAGGGTTGGACTCTTCG ATGAGAAAACTAGCCATCCTAGATGCACGTGCTAAAAGCATAGCTTTTCGGATGAATGAA GCTGTGGCAGAGCTGAAATTGATTCAATCTTCCATAGGAACACTCAATCAGGAAATTCCC AAAAGAGAGAAGCTAGAACTTGTACATACTGACCAGGTTGAAAGGTGTGCATATAACCAC ATTATGTTACCAAATTGCAGTTCAACTGTTTGTGCTGATGACTTGTACAACTTTAGAGAA TTGACTTTGTCAGATATTAAAGCTGCAACATGCAAGTTCTCAGACAGCTTAAAAGTACTG CCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAGAAGTGTAATGATTTAT AAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCAAGAGGTCCACCTCATT AGCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGCATTGTGT CTTGTCTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAAGTGCGGC ATTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAGTGCTCTA TTCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCTTGAAAAC ATCCTTTTAGATGCCAACCTGCACTGCAAGATAGCTGATTGTGGTATTTCTCAATTATTC ATGGAAGATGCCAAGGACGCAGACCCGGAATACCGGAGAAGCAAACCATTGACACCCAAA TCTGACATATACTCCTTTGGGATTGTGATACTCCAGTTACTAACTGGGAAGCAGGCTGCA GGCCTTCCCAGCGAAGTAAGGCGTGCAATGTCCAGTGGAAAGCTATGGTCATTGTTAGAT CCAACAGCTGGAGAGTGGCCTCTGGAGGTGGCTCGAAGGTTAGCAGAGTTGGGGCTCAAG TGCAGTGAGGCAGCAAGTCCAGAGCTGCTGACTCCAGAAACTGTGCGAGATCTGGAACAG CTCCACCTGATGAGGGATAATAGACAAGTGCCCTCCTTCTTCCTGTGCCCGATCCTCAAG GAAGTGATGCATGATCCCCAGGTGGGGGCGGACGGGTTGACGTACGAAGGGCGCGCCATT TCCGAGTTGATGGACAATGGCCCTCCAATCACCCCCAACCACGCCCTTCGTTTTGCCATC CATGACTGGCTCTCTCAGAGATCAACTCCTTTCTGA

Peptide Sequence

PEP ID	Os10t0100500-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:67119:72969:1 gene:Os10g0100500 transcript:Os10t0100500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 285 description:Serine/threonine protein kinase-related domain containing protein. (Os10t0100500-01);Similar to predicted protein. (Os10t0100500-02)
Sequence	MEILSPSPPPSPGPASASASASGSAMDSFIHRGAGWHFPRRDNVDARVHVAVGRSPEKTL GLLRWAFRRFACAQVVLVHVHQPSPLIPTLLGKIPAAQATEELVLSHRKSEKDEMNKILL TYLTFCHRAQVQASLLVTENEQIHDGIITLVKDHGITKLVMGSTPDTCFKLKASYGKASF MARNAPSFCEIWFVWRGRHIWTREAAAAIGNNISVYNEDDVMIRKRIRFSSTSNNAESIL DEGYISYEAQTPADRYEITISDNGQPNDYESLVDANHFCNIIVPNLQNAQSAFNSTFQPG SSVDMESLVLYPQEILDKNFKQVILEAERSRKDAFVELLKRKDTESRVAGVIARAKASEF AQKQEMKMREELEALLTATKKQHEDLAENKEKATEGLDSSMRKLAILDARAKSIAFRMNE AVAELKLIQSSIGTLNQEIPKREKLELVHTDQVERCAYNHIMLPNCSSTVCADDLYNFRE LTLSDIKAATCKFSDSLKVLPRGLGCVYKGEIMNRSVMIYKLHSCIIQSSMQFQQEVHLI SKVRHPHLVTLIGACPDALCLVYEYVPNGSLHDRLWSKCGIPQLPWKIRARIVAEISSAL FFLHSCKPQMIVHGDLKLENILLDANLHCKIADCGISQLFMEDAKDADPEYRRSKPLTPK SDIYSFGIVILQLLTGKQAAGLPSEVRRAMSSGKLWSLLDPTAGEWPLEVARRLAELGLK CSEAASPELLTPETVRDLEQLHLMRDNRQVPSFFLCPILKEVMHDPQVGADGLTYEGRAI SELMDNGPPITPNHALRFAIHDWLSQRSTPF

Transcript Sequence

Transcript ID	Os10t0100500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:67119:72969:1 gene:Os10g0100500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 285 description:Serine/threonine protein kinase-related domain containing protein. (Os10t0100500-01);Similar to predicted protein. (Os10t0100500-02)
Sequence	TCCATCCATGGAGATACTTAGCCCGTCGCCGCCGCCCAGCCCCGGCCCCGCCTCCGCCTC CGCCTCCGCCTCCGGCTCCGCCATGGATTCCTTCATCCACAGAGGTGCCGGCTGGCATTT CCCCCGCCGCGACAACGTCGACGCGCGGGTCCATGTCGCCGTCGGGAGGTCGCCGGAGAA GACGTTGGGCCTGCTGCGATGGGCCTTCCGCCGCTTCGCCTGCGCCCAAGTCGTCCTCGT GCACGTCCACCAACCTTCTCCGCTCATCCCTACCCTCTTAGGCAAGATTCCTGCCGCTCA AGCCACCGAAGAGCTCGTGCTGTCGCATCGCAAATCCGAGAAGGACGAAATGAACAAGAT CCTCCTCACCTACCTCACTTTCTGTCACAGGGCACAGGTTCAGGCAAGTCTTCTTGTCAC GGAGAATGAACAAATCCATGATGGTATTATCACTTTGGTCAAAGATCATGGGATTACAAA GCTTGTCATGGGTTCTACACCTGATACTTGCTTCAAGTTGAAAGCGAGCTATGGCAAAGC ATCTTTTATGGCAAGGAATGCCCCATCATTTTGTGAAATCTGGTTTGTTTGGAGAGGAAG ACACATTTGGACCAGAGAAGCAGCTGCAGCCATTGGCAACAATATCTCAGTTTACAATGA AGATGATGTTATGATCAGGAAAAGAATCAGGTTCAGCTCTACTAGTAACAATGCTGAATC CATACTTGATGAAGGATACATTTCATACGAGGCACAAACACCTGCTGATCGTTATGAAAT CACCATTTCAGATAATGGTCAACCGAATGATTATGAATCTCTTGTTGATGCCAACCATTT CTGCAATATTATTGTACCAAATTTGCAAAATGCACAGTCTGCATTTAACTCAACATTCCA GCCTGGTTCTTCTGTAGACATGGAATCATTAGTGTTATATCCTCAGGAAATCTTGGATAA AAATTTCAAGCAGGTCATTCTAGAAGCAGAGAGATCAAGGAAGGATGCTTTTGTTGAGCT TCTCAAGCGCAAAGATACAGAGTCAAGAGTAGCCGGTGTTATTGCCAGGGCAAAAGCTTC TGAGTTCGCTCAAAAACAAGAAATGAAAATGCGGGAGGAACTTGAAGCTTTGTTGACAGC CACAAAAAAGCAGCATGAAGATCTTGCAGAAAATAAAGAAAAGGCTACAGAAGGGTTGGA CTCTTCGATGAGAAAACTAGCCATCCTAGATGCACGTGCTAAAAGCATAGCTTTTCGGAT GAATGAAGCTGTGGCAGAGCTGAAATTGATTCAATCTTCCATAGGAACACTCAATCAGGA AATTCCCAAAAGAGAGAAGCTAGAACTTGTACATACTGACCAGGTTGAAAGGTGTGCATA TAACCACATTATGTTACCAAATTGCAGTTCAACTGTTTGTGCTGATGACTTGTACAACTT TAGAGAATTGACTTTGTCAGATATTAAAGCTGCAACATGCAAGTTCTCAGACAGCTTAAA AGTACTGCCACGAGGTCTTGGATGTGTTTATAAAGGAGAGATTATGAACAGAAGTGTAAT GATTTATAAGTTGCACTCGTGTATCATTCAGAGTTCGATGCAGTTCCAGCAAGAGGTCCA CCTCATTAGCAAGGTGAGGCACCCTCACCTGGTGACTTTGATTGGGGCATGCCCGGATGC ATTGTGTCTTGTCTATGAATACGTGCCAAACGGGAGCCTTCACGACCGCCTTTGGAGCAA GTGCGGCATTCCTCAGTTGCCATGGAAAATCCGTGCACGTATTGTTGCTGAAATCTCAAG TGCTCTATTCTTCTTGCATTCCTGTAAACCTCAGATGATTGTCCACGGTGACTTGAAGCT TGAAAACATCCTTTTAGATGCCAACCTGCACTGCAAGATAGCTGATTGTGGTATTTCTCA ATTATTCATGGAAGATGCCAAGGACGCAGACCCGGAATACCGGAGAAGCAAACCATTGAC ACCCAAATCTGACATATACTCCTTTGGGATTGTGATACTCCAGTTACTAACTGGGAAGCA GGCTGCAGGCCTTCCCAGCGAAGTAAGGCGTGCAATGTCCAGTGGAAAGCTATGGTCATT GTTAGATCCAACAGCTGGAGAGTGGCCTCTGGAGGTGGCTCGAAGGTTAGCAGAGTTGGG GCTCAAGTGCAGTGAGGCAGCAAGTCCAGAGCTGCTGACTCCAGAAACTGTGCGAGATCT GGAACAGCTCCACCTGATGAGGGATAATAGACAAGTGCCCTCCTTCTTCCTGTGCCCGAT CCTCAAGGAAGTGATGCATGATCCCCAGGTGGGGGCGGACGGGTTGACGTACGAAGGGCG CGCCATTTCCGAGTTGATGGACAATGGCCCTCCAATCACCCCCAACCACGCCCTTCGTTT TGCCATCCATGACTGGCTCTCTCAGAGATCAACTCCTTTCTGATTTTCCCCAAGGATCTG GATTTTGTATGTACACATTGTTTATTTCATAGTCAGTCTGTTTGTTAGTAGCACATGCAT GATGTAACGAAATAATAATAGAGTAAATATTTCAAGTTTCATGTATCGAGCAAATGTCAC TGTACATATAGAGTGAGTTAGGAGCTATGTTCAGGGCAGTCGGAGTATCTTGCTAGTTGC CCGTTTGGTCTAAGTAGCAGTTGTCATGGGGTTGACAAACTACCCCCTCCGTTTCTTTAC TTATGTAAGATGCTTTGATTTTTTTATCAGTTAAAGTTCAATCAAATTTATAGAAAACAT AGTTACATTTTTAAC