Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0573200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22934014:22939008:1 gene:Os09g0573200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0573200-01);Protein of unknown function DUF3550/UPF0682 domain containing protein. (Os09t0573200-02);Similar to predicted protein. (Os09t0573200-03)
Sequence	ATGGCGTCGTCGCCGCACCAAGTTGTAGCTCCCCAACCCCAATCCCAAGCCCAAGCAGGT GGCGGCGGCGGCGGCGGTGGCGGGACGGCCGAGCAGTTCTGGTCGCTGCTGGACAAGGCA GACCGGCGCTTCGCCCGCGTGCGCGACCTCCCCCTCTTCGGCCGCCGGGAGCCCGATGAA TACGGCAAGGTCTTCCGCATCTACACCCAGCTGTGGCGCATGCAGCAGGAGCACCGTCAC CGCCTCCTCGACGCCGGGCTCCGCCGATGGCAGGTCGGTGAGATCGCCGCCCGCATCGCT CACCTCTACTACTCCCAGTACCAGCGCACCTCGGACACCGCCCTCCTCTCCGAGGCCTTC GTCTTCTACCACGCCGTCCTCGACCGCGGCTACTTCCTCGCCGACGCCGCCGACCATCTC TTTGCCCCCACCAAGCACCTCCGCTTCCTCGCCAGGTTCCTCCTCGTTGCGCTTCTACTC GCCAGGCGCGCCGACACTGTCCCTCGCCTCACCACCCACATCCGCACGCTCCTCGACGAC TCCAAGAAGACCCTCCAAGAAGCCGACTACAAGGAGTGGAAGCACGTCGTCCAAGAAATC GCGAGGTTTCTCAGAGCTGACTCCCCCTTTATCAACATGAGACCACTCAGGTACAGCTAC GCATTTGATCCTCCCCCTGATACTCTTCCTACCGTCCCACCTACTGTCAAGAAGCGAGGT CTGGTCTTAAATGATGCCATGCTATGCAGCTACTATCAAAACGAGATCAAATTTACAGAC CTCACCATAGATGTTTTCAGAATGCTTCAATGCCTCGAATGGGAACCATGCGGTTCTTTT GCACTAACCAATGGTTACAGTACCCGCGATGAAAGTGGACAAAATCATCCCAATCTCTTA AAAGATCTGAGAGATGCTGCGCTGCCTCCAAACCCACTTAAAACAATTCTCTATCGTCCC TCAGTGACTCATTTCCTAACAGTCCTTGCCACCAAATGTGAGGAGCTCCCGTCAAATGGT ATGATGTTAATATACCTTTCAGCTGCAGGCGAGGTGGGATCTTCTGGATTTTGCCCTGAT ACAAATGAGATGGTTGTGAGCAGCTTGAATAAGTTTGATATATCTAATACTAGTACCATC AATGTAAATGAAGACAATGGACCTCGTCTATGGCTAGGCTGCCGTGAAGGTGAAGGTTCA AACTGTATATACCCTTGTGATCTGATTCCATTTACAAGAAGACCACTCTTTTTGGTGATC GACAGCAATGCCAGCTATTCATTCAAGTCAATTCATGGGTTTGAAAAAGGGGAGACAACG GCCATGTTACTTTCTCCAAGTTGCCGATCTTCCTCGGCAGGATTCAGTGGGGATTCTGTA CGGCAGATTGGCAGTCAATTTACTATGTTTCTCACAGCTCCATTGCAAGCTTTCTGCCAT CTGATTGGCAATAATGGGGTCGACATTGATAGGGATACCTATAACAAAGCTGAAGAGTTA CTATCATTGTCCTTAAATGAATGGGCCACTACTTTGGTTGCATCATCTTCACTTCATCCT GTTTGGGTTGAAGTTTTAGGCGATCCACTCTTGAGGCGGCTTCTTCTCAGGTTTATATTC TGCAGAGCTGCGCATTCGATCTTCAAACCTACGTACCATAAGGTGGACTTCCTCCCAACT TGCACACCTCCTTTGCCAGAGTCGGTTGATGCAGAGAGCATGCTTTCCCAATGCTGCCTG TTGCGAGTTGCATCTTTCTTTGGCGCCACCAACCAATTCTCATTTTCTGAGGTAACCACA TGGCCTGAGGTTGATGTTGAGGAGGCTGCTGTCGTCAACCCCTCGATCTAG

Peptide Sequence

PEP ID	Os09t0573200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22934014:22939008:1 gene:Os09g0573200 transcript:Os09t0573200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0573200-01);Protein of unknown function DUF3550/UPF0682 domain containing protein. (Os09t0573200-02);Similar to predicted protein. (Os09t0573200-03)
Sequence	MASSPHQVVAPQPQSQAQAGGGGGGGGGTAEQFWSLLDKADRRFARVRDLPLFGRREPDE YGKVFRIYTQLWRMQQEHRHRLLDAGLRRWQVGEIAARIAHLYYSQYQRTSDTALLSEAF VFYHAVLDRGYFLADAADHLFAPTKHLRFLARFLLVALLLARRADTVPRLTTHIRTLLDD SKKTLQEADYKEWKHVVQEIARFLRADSPFINMRPLRYSYAFDPPPDTLPTVPPTVKKRG LVLNDAMLCSYYQNEIKFTDLTIDVFRMLQCLEWEPCGSFALTNGYSTRDESGQNHPNLL KDLRDAALPPNPLKTILYRPSVTHFLTVLATKCEELPSNGMMLIYLSAAGEVGSSGFCPD TNEMVVSSLNKFDISNTSTINVNEDNGPRLWLGCREGEGSNCIYPCDLIPFTRRPLFLVI DSNASYSFKSIHGFEKGETTAMLLSPSCRSSSAGFSGDSVRQIGSQFTMFLTAPLQAFCH LIGNNGVDIDRDTYNKAEELLSLSLNEWATTLVASSSLHPVWVEVLGDPLLRRLLLRFIF CRAAHSIFKPTYHKVDFLPTCTPPLPESVDAESMLSQCCLLRVASFFGATNQFSFSEVTT WPEVDVEEAAVVNPSI

Transcript Sequence

Transcript ID	Os09t0573200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22934014:22939008:1 gene:Os09g0573200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0573200-01);Protein of unknown function DUF3550/UPF0682 domain containing protein. (Os09t0573200-02);Similar to predicted protein. (Os09t0573200-03)
Sequence	AGGACCCATTGGATTCGCCATGGCGTCGTCGCCGCACCAAGTTGTAGCTCCCCAACCCCA ATCCCAAGCCCAAGCAGGTGGCGGCGGCGGCGGCGGTGGCGGGACGGCCGAGCAGTTCTG GTCGCTGCTGGACAAGGCAGACCGGCGCTTCGCCCGCGTGCGCGACCTCCCCCTCTTCGG CCGCCGGGAGCCCGATGAATACGGCAAGGTCTTCCGCATCTACACCCAGCTGTGGCGCAT GCAGCAGGAGCACCGTCACCGCCTCCTCGACGCCGGGCTCCGCCGATGGCAGGTCGGTGA GATCGCCGCCCGCATCGCTCACCTCTACTACTCCCAGTACCAGCGCACCTCGGACACCGC CCTCCTCTCCGAGGCCTTCGTCTTCTACCACGCCGTCCTCGACCGCGGCTACTTCCTCGC CGACGCCGCCGACCATCTCTTTGCCCCCACCAAGCACCTCCGCTTCCTCGCCAGGTTCCT CCTCGTTGCGCTTCTACTCGCCAGGCGCGCCGACACTGTCCCTCGCCTCACCACCCACAT CCGCACGCTCCTCGACGACTCCAAGAAGACCCTCCAAGAAGCCGACTACAAGGAGTGGAA GCACGTCGTCCAAGAAATCGCGAGGTTTCTCAGAGCTGACTCCCCCTTTATCAACATGAG ACCACTCAGGTACAGCTACGCATTTGATCCTCCCCCTGATACTCTTCCTACCGTCCCACC TACTGTCAAGAAGCGAGGTCTGGTCTTAAATGATGCCATGCTATGCAGCTACTATCAAAA CGAGATCAAATTTACAGACCTCACCATAGATGTTTTCAGAATGCTTCAATGCCTCGAATG GGAACCATGCGGTTCTTTTGCACTAACCAATGGTTACAGTACCCGCGATGAAAGTGGACA AAATCATCCCAATCTCTTAAAAGATCTGAGAGATGCTGCGCTGCCTCCAAACCCACTTAA AACAATTCTCTATCGTCCCTCAGTGACTCATTTCCTAACAGTCCTTGCCACCAAATGTGA GGAGCTCCCGTCAAATGGTATGATGTTAATATACCTTTCAGCTGCAGGCGAGGTGGGATC TTCTGGATTTTGCCCTGATACAAATGAGATGGTTGTGAGCAGCTTGAATAAGTTTGATAT ATCTAATACTAGTACCATCAATGTAAATGAAGACAATGGACCTCGTCTATGGCTAGGCTG CCGTGAAGGTGAAGGTTCAAACTGTATATACCCTTGTGATCTGATTCCATTTACAAGAAG ACCACTCTTTTTGGTGATCGACAGCAATGCCAGCTATTCATTCAAGTCAATTCATGGGTT TGAAAAAGGGGAGACAACGGCCATGTTACTTTCTCCAAGTTGCCGATCTTCCTCGGCAGG ATTCAGTGGGGATTCTGTACGGCAGATTGGCAGTCAATTTACTATGTTTCTCACAGCTCC ATTGCAAGCTTTCTGCCATCTGATTGGCAATAATGGGGTCGACATTGATAGGGATACCTA TAACAAAGCTGAAGAGTTACTATCATTGTCCTTAAATGAATGGGCCACTACTTTGGTTGC ATCATCTTCACTTCATCCTGTTTGGGTTGAAGTTTTAGGCGATCCACTCTTGAGGCGGCT TCTTCTCAGGTTTATATTCTGCAGAGCTGCGCATTCGATCTTCAAACCTACGTACCATAA GGTGGACTTCCTCCCAACTTGCACACCTCCTTTGCCAGAGTCGGTTGATGCAGAGAGCAT GCTTTCCCAATGCTGCCTGTTGCGAGTTGCATCTTTCTTTGGCGCCACCAACCAATTCTC ATTTTCTGAGGTAACCACATGGCCTGAGGTTGATGTTGAGGAGGCTGCTGTCGTCAACCC CTCGATCTAGCGGTACCAACTGTGACTCTTGCGCATCACAATATTTAGTTTCTACCTATC AAAAGATGAAGAGATCCATTGTAATACCTTAATGTGGTGTGTGTACAGCCAAATTTGCAA TACCCTATTTATCGTCGTGCTAAAATTTCCGTTACTGGCCCCGCCTCCTGTAGCCCTCGA GGCCAAGCGTCTTTGAGCACCGAATGATCTGACATTGGACGAACAAGATTACAGACATAT GGACAAAATATGTGGAGACATTAATTCATACCATAATTCACATTCCC