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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0572800-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:22909001:22909683:1 gene:Os09g0572800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ole e 1 allergen family protein. (Os09t0572800-01)
Sequence

ATGGTTATGGCCGGCGGTGTGGTGATGGTGATGGTGGTGGCGACGGCGATGGCGATGGCG
GTGCAGGGGAGCCGTGACCCGGATTTCTTCGTGGAGGGCGACGTGTACTGCGACACGTGC
CGCGCGGGGTTCCAGACGAACGCGACGACGGCGATCCAGGGCGCGCGGGTGCGGCTGGAG
TGCCGGCACTTCATGAGCGCGAGCGGGGCGGTGGAGAGATCGGCGGAGGGGACGACGGAC
GCGGCGGGGCACTACCGCATCGAGCTGGTGGACAACCGCGGCGCCGAGGAGGTGTGTGCG
GTGGCGCTGCTCAGCAGCCCGGACCCCGAATGCCACGAGACGGAGGTGGGTCGCGACCGC
GCGCCGGTCACCCTCGTTCAGGACGCCGGCCTCGCCACCATGGTCCGCCGCGCCAATCCT
CTCGGCTTCCTCAAGACCCGCCCACTCCCCATCTGCGGTGACCTTCTCAAGAGCTACGCG
CTCGGCACCGCACCAAGCTACTAG

Peptide Sequence

PEP ID

Os09t0572800-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:22909001:22909683:1 gene:Os09g0572800 transcript:Os09t0572800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ole e 1 allergen family protein. (Os09t0572800-01)
Sequence

MVMAGGVVMVMVVATAMAMAVQGSRDPDFFVEGDVYCDTCRAGFQTNATTAIQGARVRLE
CRHFMSASGAVERSAEGTTDAAGHYRIELVDNRGAEEVCAVALLSSPDPECHETEVGRDR
APVTLVQDAGLATMVRRANPLGFLKTRPLPICGDLLKSYALGTAPSY

Transcript Sequence

Transcript ID

Os09t0572800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:22909001:22909683:1 gene:Os09g0572800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ole e 1 allergen family protein. (Os09t0572800-01)
Sequence

ATCGAGATTGATTGATTGATGTATGGTTATGGCCGGCGGTGTGGTGATGGTGATGGTGGT
GGCGACGGCGATGGCGATGGCGGTGCAGGGGAGCCGTGACCCGGATTTCTTCGTGGAGGG
CGACGTGTACTGCGACACGTGCCGCGCGGGGTTCCAGACGAACGCGACGACGGCGATCCA
GGGCGCGCGGGTGCGGCTGGAGTGCCGGCACTTCATGAGCGCGAGCGGGGCGGTGGAGAG
ATCGGCGGAGGGGACGACGGACGCGGCGGGGCACTACCGCATCGAGCTGGTGGACAACCG
CGGCGCCGAGGAGGTGTGTGCGGTGGCGCTGCTCAGCAGCCCGGACCCCGAATGCCACGA
GACGGAGGTGGGTCGCGACCGCGCGCCGGTCACCCTCGTTCAGGACGCCGGCCTCGCCAC
CATGGTCCGCCGCGCCAATCCTCTCGGCTTCCTCAAGACCCGCCCACTCCCCATCTGCGG
TGACCTTCTCAAGAGCTACGCGCTCGGCACCGCACCAAGCTACTAGCTACCTCCTACACT
GCTCCCTTTATTATTATTTCCTCTTCTTGCTTTTATATTTATATTATACTGAAAAAATAC
CCGTGCATTATAATGGGTGAAAATATTCTAATCATAATATACTTTTTCATGTATAATCAT
ATTAATGACAATTTTTGTATTTT