Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0572400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22883138:22887559:-1 gene:Os09g0572400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER F FAMILY MEMBER 5 description:Similar to Abcf2-prov protein. (Os09t0572400-01)
Sequence	ATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCCGCCGCTGCCAAG AGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGCACCGCCGTCCTC ACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTCACATTCCACGGC CATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGATATGGTTTGCTT GGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGCCGGGAGCTTCCT ATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCTTCCGACATGTCT GCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAGAAGGAGGCTGAA ATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTTTATGAACGCTTA GAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTGTTTGGCTTGGGT TTTAACAAGCACATGCAGGCAAAGAAAACCTGTGATTTCTCTGGCGGTTGGCGCATGAGG ATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTTGCTTGATGAGCCCACC AATCATCTAGATCTTGAGGCCTGTGTCTGGCTGGAGGAAACCTTGAAGAAATTTGACCGT ATACTTGTCGTCATATCACACTCCCAGGACTTCCTAAATGGAGTATGTACAAATATCATC CACATGCAAAACAGGAAGCTCAAGCTATACACTGGCAACTATGACCAGTATGTCCAAACA CGAGCCGAGCTTGAAGAAAATCAAATGAAACAATACAGATGGGAGCAGGACCAGATTGCC TCGATGAAGGAGTACATTGCACGGTTTGGTCACGGATCTGCCAAGCTGGCCCGACAGGCT CAAAGTAAAGAGAAAACTCTTGCTAAGATGGAGCGTGGTGGGCTCACGGAGAAGGTTGTA AGGGATAAGGTATTGACGTTCCGCTTCACTGATGTTGGCACGCTACCACCTCCAGTGCTG CAGTTTGTGGAGGTCACATTTGGGTACACACCAGACAACCTGATCTACAAGAACCTAGAT TTTGGTGTTGACCTTGACTCAAGGGTGGCGCTGGTTGGTCCTAATGGGGCTGGGAAGAGT ACGCTCCTTAAACTCATGACAGGTGATCTCATACCGCTGGACGGCATGGTGAGGCGACAC AACCATCTCAGGATCGCACAATTCCACCAGCACCTTGCAGAGAAGCTGGACCTGGACATG TCAGCTCTGCAGTACATGATGAAGGAATACCCAGGGAACGAGGAGGAGAGGATGAGGGCA GCCATCGGCAAGTTTGGGTTGTCAGGGAAGGCACAGGTAATGCCAATGAGGAACCTGTCG GACGGGCAGAGGAGCAGAGTGATATTTGCATGGTTGGCGTGGAGGGAGCCACACATGCTG CTGCTGGATGAGCCAACGAACCATCTGGACATTGAAACAATCGACTCTCTTGCAGAGGCG CTGAATGAATGGGATGGAGGGCTTGTGCTGGTGAGCCATGACTTCAGGCTGATCAACCAA GTGGCGCAGGAGATATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATC ATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGA

Peptide Sequence

PEP ID	Os09t0572400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22883138:22887559:-1 gene:Os09g0572400 transcript:Os09t0572400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER F FAMILY MEMBER 5 description:Similar to Abcf2-prov protein. (Os09t0572400-01)
Sequence	MVSDASKKKAAQKKAAAAAKRGDKAKAAITLSERTCTAVLTSHPLSRDIHIESLSLTFHG HDLLLDTDLELNYGRRYGLLGLNGCGKSCLLKAIGCRELPIPPHMDIYHLTHEIEASDMS ALQAVISCDEQRLQLEKEAEILAAQDDGGGEALDRVYERLEAIDASTAEKRAAEILFGLG FNKHMQAKKTCDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEETLKKFDR ILVVISHSQDFLNGVCTNIIHMQNRKLKLYTGNYDQYVQTRAELEENQMKQYRWEQDQIA SMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDKVLTFRFTDVGTLPPPVL QFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLIPLDGMVRRH NHLRIAQFHQHLAEKLDLDMSALQYMMKEYPGNEEERMRAAIGKFGLSGKAQVMPMRNLS DGQRSRVIFAWLAWREPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQ VAQEIWVCEKQAVTRWEGDIMEFKEHLRSKAGVDD

Transcript Sequence

Transcript ID	Os09t0572400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22883138:22887559:-1 gene:Os09g0572400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER F FAMILY MEMBER 5 description:Similar to Abcf2-prov protein. (Os09t0572400-01)
Sequence	TTTCTCTCTCTCTCATTCTTGTGTTTCTTCTCGATCGATCTCTCGATTTCTCTCTGTGCA CCAGCATCAGCTATGGTGTCCGACGCCAGCAAGAAGAAGGCGGCGCAGAAGAAGGCCGCC GCCGCTGCCAAGAGGGGTGACAAGGCCAAGGCCGCCATTACTCTCTCCGAGCGCACCTGC ACCGCCGTCCTCACCTCCCATCCCCTCTCCCGCGACATCCACATCGAGTCCCTCTCCCTC ACATTCCACGGCCATGACCTGCTTCTTGACACCGACCTGGAGCTCAACTACGGCAGGCGA TATGGTTTGCTTGGCTTAAACGGCTGTGGAAAGTCCTGTCTCCTCAAAGCTATAGGATGC CGGGAGCTTCCTATCCCTCCACACATGGACATCTATCATCTCACCCATGAGATCGAGGCT TCCGACATGTCTGCGCTACAAGCTGTCATCAGCTGTGACGAACAGAGACTCCAGCTCGAG AAGGAGGCTGAAATCTTGGCCGCTCAAGATGACGGTGGCGGCGAAGCCCTGGACCGCGTT TATGAACGCTTAGAAGCCATCGACGCATCCACCGCTGAAAAGCGTGCTGCAGAGATTTTG TTTGGCTTGGGTTTTAACAAGCACATGCAGGCAAAGAAAACCTGTGATTTCTCTGGCGGT TGGCGCATGAGGATCGCTTTGGCTAGGGCGCTCTTCATGAATCCAACTATCCTTTTGCTT GATGAGCCCACCAATCATCTAGATCTTGAGGCCTGTGTCTGGCTGGAGGAAACCTTGAAG AAATTTGACCGTATACTTGTCGTCATATCACACTCCCAGGACTTCCTAAATGGAGTATGT ACAAATATCATCCACATGCAAAACAGGAAGCTCAAGCTATACACTGGCAACTATGACCAG TATGTCCAAACACGAGCCGAGCTTGAAGAAAATCAAATGAAACAATACAGATGGGAGCAG GACCAGATTGCCTCGATGAAGGAGTACATTGCACGGTTTGGTCACGGATCTGCCAAGCTG GCCCGACAGGCTCAAAGTAAAGAGAAAACTCTTGCTAAGATGGAGCGTGGTGGGCTCACG GAGAAGGTTGTAAGGGATAAGGTATTGACGTTCCGCTTCACTGATGTTGGCACGCTACCA CCTCCAGTGCTGCAGTTTGTGGAGGTCACATTTGGGTACACACCAGACAACCTGATCTAC AAGAACCTAGATTTTGGTGTTGACCTTGACTCAAGGGTGGCGCTGGTTGGTCCTAATGGG GCTGGGAAGAGTACGCTCCTTAAACTCATGACAGGTGATCTCATACCGCTGGACGGCATG GTGAGGCGACACAACCATCTCAGGATCGCACAATTCCACCAGCACCTTGCAGAGAAGCTG GACCTGGACATGTCAGCTCTGCAGTACATGATGAAGGAATACCCAGGGAACGAGGAGGAG AGGATGAGGGCAGCCATCGGCAAGTTTGGGTTGTCAGGGAAGGCACAGGTAATGCCAATG AGGAACCTGTCGGACGGGCAGAGGAGCAGAGTGATATTTGCATGGTTGGCGTGGAGGGAG CCACACATGCTGCTGCTGGATGAGCCAACGAACCATCTGGACATTGAAACAATCGACTCT CTTGCAGAGGCGCTGAATGAATGGGATGGAGGGCTTGTGCTGGTGAGCCATGACTTCAGG CTGATCAACCAAGTGGCGCAGGAGATATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGG GAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGA GTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCAC TCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGG ACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCAC GGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGATGTACCG TCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGATCCAGCCAGCATAGCATGT ATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCG TTTCATATTATAATACTATCTATTATTGCCCACATTCATATATATGTCTAGATTCATTAG CATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTA TCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCC CTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGAAACTGTACCACCCCCACGAT ATTATATATGAGATTGGATTTTAAACT