Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0572200-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:22855457:22857854:1 gene:Os09g0572200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mutant low phytic acid protein 1. (Os09t0572200-01);Similar to predicted protein. (Os09t0572200-02)
Sequence	ATGGCCGCCGTGCAGGGGCAGGGGCAGGGGAAGCTCCTGTACATTGTGGTGGTCGACGAC GATGGCGCCACCTTCCGCTACACGCGCTCCCTCCTCCACAGCACTCTGCAGCTGATGGGA TGCAAGCCGCGCCATGCCTTCGAGATCAGCGGCAGGGTGTTCGACGAGATCCGAGGTCAC ATGGGCGGTGACATGGCCATGGGCGGCGGCGGTGGCGTGCAGCGCTACGAGCTGGCCGCC GACGCGGAAGCCGCCAGCCCCAGGCAGTTCCAGTTCGAGCTCTACAAGCGCCGCACCACC CTTCTCATCCCTCGCCCGCTCTTCCTCCGCCTCGTCTGCCACGCCCTCGCCCTCTACAAG TATGTCGCCCCCGACCAGCGCTCTGATCTCCACCGAGCCTGCAGGATCCGGGAAAGGAAG GAATCAGTCACCATTCTTCTCTGCGGAACCAGCGGCTGCGGCAAGTCTACTCTTTCCACC TTGCTGGGGAGCAGATTAGGAATCACTACTGTAGTCTCCACCGATTCCATTCGCCACATG ATGCGGAGCTTTGTTGAAGAGAAACAAAATCCCCTTCTCTGGGCATCTACCTATCATGCA GGCGAATGCCTCGACCCAGTAGCGGTCGCTGATGCTAAAGCTAGGCGCAAAGCCAAAAAA CGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATAAAACCAGGCCTCTCAATGAC AAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCATAGAAGGCTACAAAGCACAA AGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTGCCTGGGAGGATCGCAAGGAA TCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTGTGATGGGGCTAATGAGGAAA CATCCTTCTATAATACCTTTTATGATCTACATATCCGATGAGGGCAAGCACACCGAGAGG TTTGCCGTACGTGCAAAGTACATGACACTTGACCCAACAAAAAATAAGTACGTCAAATAC ATCAGCAACATTAGAACTATCCAAGAGTACCTCTGCAGCCGAGCCGACAAGTACCTAGTT CCCAAGGTGAACAACACTAATGTTGATCGGAGTGTGGCTTCTATCCATGCCACTGTCTTT AGCTGCCTCCGTAGGAGAGCTGCTGGTGATCAGTTATATGACCCTGCTACAAACACAGTG GCAGTTGTAAACGAGGAATACAAAAACCAATGTGTGGCCAACTCCATGAGTTCCAAGGGG ATGTTCAAATTGATTCAAAGGTTAGGATCCTCAAGAAAGCTCATGGCCATTGTCAATGTG GATGGATCTGTTTCAAAGGCTTGGCCGGTTGAGTCCAGCAGCGGGGATGGAAAAGGCGGT TCGGAAAATGGCAGTAAGAAATATGTAGGCGATCCAATATACGGGCCTCTAAATATTGGA AGGGCAGAGTCAGTCAATCTCCAGTTTGGCGCTTTCGGAATAAGTGCCTGGCCTACTGAT GCAGGCTGTACAAGTCAAGCTGGAAGTGTCAACGAGTCATGGGACAATGCTAATGAAGGC ACTGGAAGCCATGTTCCTTCTTCTTCTGGTTCTCCTAAGAAGTTGGATGGACATTGTAAA GAGATTAAAGAATCAGCAGCGGCATCTGGAAGTGATGATGACG

Peptide Sequence

PEP ID	Os09t0572200-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:22855457:22857854:1 gene:Os09g0572200 transcript:Os09t0572200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mutant low phytic acid protein 1. (Os09t0572200-01);Similar to predicted protein. (Os09t0572200-02)
Sequence	MAAVQGQGQGKLLYIVVVDDDGATFRYTRSLLHSTLQLMGCKPRHAFEISGRVFDEIRGH MGGDMAMGGGGGVQRYELAADAEAASPRQFQFELYKRRTTLLIPRPLFLRLVCHALALYK YVAPDQRSDLHRACRIRERKESVTILLCGTSGCGKSTLSTLLGSRLGITTVVSTDSIRHM MRSFVEEKQNPLLWASTYHAGECLDPVAVADAKARRKAKKRSGISTTSTIDFDKTRPLND KPDGKPIGKKQMAIEGYKAQSEMVIDSLDRLITAWEDRKESVVVEGVHLSLNFVMGLMRK HPSIIPFMIYISDEGKHTERFAVRAKYMTLDPTKNKYVKYISNIRTIQEYLCSRADKYLV PKVNNTNVDRSVASIHATVFSCLRRRAAGDQLYDPATNTVAVVNEEYKNQCVANSMSSKG MFKLIQRLGSSRKLMAIVNVDGSVSKAWPVESSSGDGKGGSENGSKKYVGDPIYGPLNIG RAESVNLQFGAFGISAWPTDAGCTSQAGSVNESWDNANEGTGSHVPSSSGSPKKLDGHCK EIKESAAASGSDDD

Transcript Sequence

Transcript ID	Os09t0572200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22855457:22857854:1 gene:Os09g0572200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mutant low phytic acid protein 1. (Os09t0572200-01);Similar to predicted protein. (Os09t0572200-02)
Sequence	GGAATTCCAGGGGCGACGACATGGCCGCCGTGCAGGGGCAGGGGCAGGGGAAGCTCCTGT ACATTGTGGTGGTCGACGACGATGGCGCCACCTTCCGCTACACGCGCTCCCTCCTCCACA GCACTCTGCAGCTGATGGGATGCAAGCCGCGCCATGCCTTCGAGATCAGCGGCAGGGTGT TCGACGAGATCCGAGGTCACATGGGCGGTGACATGGCCATGGGCGGCGGCGGTGGCGTGC AGCGCTACGAGCTGGCCGCCGACGCGGAAGCCGCCAGCCCCAGGCAGTTCCAGTTCGAGC TCTACAAGCGCCGCACCACCCTTCTCATCCCTCGCCCGCTCTTCCTCCGCCTCGTCTGCC ACGCCCTCGCCCTCTACAAGTATGTCGCCCCCGACCAGCGCTCTGATCTCCACCGAGCCT GCAGGATCCGGGAAAGGAAGGAATCAGTCACCATTCTTCTCTGCGGAACCAGCGGCTGCG GCAAGTCTACTCTTTCCACCTTGCTGGGGAGCAGATTAGGAATCACTACTGTAGTCTCCA CCGATTCCATTCGCCACATGATGCGGAGCTTTGTTGAAGAGAAACAAAATCCCCTTCTCT GGGCATCTACCTATCATGCAGGCGAATGCCTCGACCCAGTAGCGGTCGCTGATGCTAAAG CTAGGCGCAAAGCCAAAAAACGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATA AAACCAGGCCTCTCAATGACAAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCA TAGAAGGCTACAAAGCACAAAGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTG CCTGGGAGGATCGCAAGGAATCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTG TGATGGGGCTAATGAGGAAACATCCTTCTATAATACCTTTTATGATCTACATATCCGATG AGGGCAAGCACACCGAGAGGTTTGCCGTACGTGCAAAGTACATGACACTTGACCCAACAA AAAATAAGTACGTCAAATACATCAGCAACATTAGAACTATCCAAGAGTACCTCTGCAGCC GAGCCGACAAGTACCTAGTTCCCAAGGTGAACAACACTAATGTTGATCGGAGTGTGGCTT CTATCCATGCCACTGTCTTTAGCTGCCTCCGTAGGAGAGCTGCTGGTGATCAGTTATATG ACCCTGCTACAAACACAGTGGCAGTTGTAAACGAGGAATACAAAAACCAATGTGTGGCCA ACTCCATGAGTTCCAAGGGGATGTTCAAATTGATTCAAAGGTTAGGATCCTCAAGAAAGC TCATGGCCATTGTCAATGTGGATGGATCTGTTTCAAAGGCTTGGCCGGTTGAGTCCAGCA GCGGGGATGGAAAAGGCGGTTCGGAAAATGGCAGTAAGAAATATGTAGGCGATCCAATAT ACGGGCCTCTAAATATTGGAAGGGCAGAGTCAGTCAATCTCCAGTTTGGCGCTTTCGGAA TAAGTGCCTGGCCTACTGATGCAGGCTGTACAAGTCAAGCTGGAAGTGTCAACGAGTCAT GGGACAATGCTAATGAAGGCACTGGAAGCCATGTTCCTTCTTCTTCTGGTTCTCCTAAGA AGTTGGATGGACATTGTAAAGAGATTAAAGAATCAGCAGCGGCATCTGGAAGTGATGATG ACG