Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0571500-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:22811278:22813495:-1 gene:Os09g0571500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os09t0571500-01);Similar to lipase class 3 family protein. (Os09t0571500-02)
Sequence	CTCATCTACCTCAGCCAAGCTTCTGCAAAGGATGCTCAAGCCTTCAAGGGTCTTCATATC TCCTGCAACAACAAGGTTCAACAACTAATTTATCACCTTGAGCTTGCAAGAGGTTGCTAT AAGGGCAATGCCACTGGCCTTGCACGCCATTCTATGCTTCGCAAGAGGAACGTTCTCAAA TTCGTCAAGGACTCCAGTATTCTCAGACCTGGCTATTACATTGCCATTGATCCACGCACT AAATTGGTCATCCTTGGGATTCGTGGGACTCACACTGTTTATGACCTAGTTACCGATTTG ATTGCTCTAAGCGATAAGAAGGTATCACCTAAAGGTTTCTCGACACACTTTGGAACATAT GAGGCCGCCCGTTGGTACCTTCGCCATGAGTTGGGACTTATCAGAAAGTGTTTGGAAAAG CATAAGGATTACAAGTTGCGCCTGGTAGGGCACTCCCTTGGAGGTGCTTCAGCCGCGTTG CTTGCTATAATGCTAAGGAAGAAGTCAAAGGAAGAGCTTGGATTTAGTCCTGACGTTATA TCAGCTGTTGGATATGGAACCCCGCCTTGTGTCTCAAGAGAAATTGCTCAAAGTTGTGCA AGCTATGTTTCAACTGTTGTACTGCAGGATGATATCATCCCTAGATTAAGTGCAGCTTCA CTGGCAAGATTGCGAGCCGAAATACTCAAAACAGATTGGGTAAGTGTTTTGGAAAAAGAA GACTGGAAGCATATAGTGGACATTGTGACTAATGCTAAGCTTGTAGTTTCGTCAATTCAA GATGTGGCGCGCAAGCTTGCTGATTATGCTAAAATTGTCACAGTATCAACTAGTTCTGAT GCCATCAAAGATCAAGATCGCCCCCTGAGCACCAGTGAAGTATTGTCACCGGATAGTAAA GAGGATGTATTTGTGCCAGAAGATCTGTTCCTTCCTGGGACTCTGTATTACCTCAAGAGG GACATTGAGGATATAAACGGTGTAGAAGATGAGTCGTATACACTCTGGAGAGGTGATGCC GGGGAGAATTTTCAGAGGATACTGTTATCTGGCAATCTGATATCCGATCACAAATGTGAA AGCATATATTACGCCCTGAGGGATGTGCTCAAGACTCTGCCGCCCCAGGAATCAGGATGA

Peptide Sequence

PEP ID	Os09t0571500-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:22811278:22813495:-1 gene:Os09g0571500 transcript:Os09t0571500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os09t0571500-01);Similar to lipase class 3 family protein. (Os09t0571500-02)
Sequence	LIYLSQASAKDAQAFKGLHISCNNKVQQLIYHLELARGCYKGNATGLARHSMLRKRNVLK FVKDSSILRPGYYIAIDPRTKLVILGIRGTHTVYDLVTDLIALSDKKVSPKGFSTHFGTY EAARWYLRHELGLIRKCLEKHKDYKLRLVGHSLGGASAALLAIMLRKKSKEELGFSPDVI SAVGYGTPPCVSREIAQSCASYVSTVVLQDDIIPRLSAASLARLRAEILKTDWVSVLEKE DWKHIVDIVTNAKLVVSSIQDVARKLADYAKIVTVSTSSDAIKDQDRPLSTSEVLSPDSK EDVFVPEDLFLPGTLYYLKRDIEDINGVEDESYTLWRGDAGENFQRILLSGNLISDHKCE SIYYALRDVLKTLPPQESG

Transcript Sequence

Transcript ID	Os09t0571500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22811278:22813495:-1 gene:Os09g0571500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os09t0571500-01);Similar to lipase class 3 family protein. (Os09t0571500-02)
Sequence	CCTCATCTACCTCAGCCAAGCTTCTGCAAAGGATGCTCAAGCCTTCAAGGGTCTTCATAT CTCCTGCAACAACAAGGTTCAACAACTAATTTATCACCTTGAGCTTGCAAGAGGTTGCTA TAAGGGCAATGCCACTGGCCTTGCACGCCATTCTATGCTTCGCAAGAGGAACGTTCTCAA ATTCGTCAAGGACTCCAGTATTCTCAGACCTGGCTATTACATTGCCATTGATCCACGCAC TAAATTGGTCATCCTTGGGATTCGTGGGACTCACACTGTTTATGACCTAGTTACCGATTT GATTGCTCTAAGCGATAAGAAGGTATCACCTAAAGGTTTCTCGACACACTTTGGAACATA TGAGGCCGCCCGTTGGTACCTTCGCCATGAGTTGGGACTTATCAGAAAGTGTTTGGAAAA GCATAAGGATTACAAGTTGCGCCTGGTAGGGCACTCCCTTGGAGGTGCTTCAGCCGCGTT GCTTGCTATAATGCTAAGGAAGAAGTCAAAGGAAGAGCTTGGATTTAGTCCTGACGTTAT ATCAGCTGTTGGATATGGAACCCCGCCTTGTGTCTCAAGAGAAATTGCTCAAAGTTGTGC AAGCTATGTTTCAACTGTTGTACTGCAGGATGATATCATCCCTAGATTAAGTGCAGCTTC ACTGGCAAGATTGCGAGCCGAAATACTCAAAACAGATTGGGTAAGTGTTTTGGAAAAAGA AGACTGGAAGCATATAGTGGACATTGTGACTAATGCTAAGCTTGTAGTTTCGTCAATTCA AGATGTGGCGCGCAAGCTTGCTGATTATGCTAAAATTGTCACAGTATCAACTAGTTCTGA TGCCATCAAAGATCAAGATCGCCCCCTGAGCACCAGTGAAGTATTGTCACCGGATAGTAA AGAGGATGTATTTGTGCCAGAAGATCTGTTCCTTCCTGGGACTCTGTATTACCTCAAGAG GGACATTGAGGATATAAACGGTGTAGAAGATGAGTCGTATACACTCTGGAGAGGTGATGC CGGGGAGAATTTTCAGAGGATACTGTTATCTGGCAATCTGATATCCGATCACAAATGTGA AAGCATATATTACGCCCTGAGGGATGTGCTCAAGACTCTGCCGCCCCAGGAATCAGGATG ACAAGTAGAAGTTCCTTTTCAAGCTTTTTGCAGGATAATCTCCATCTATTCTGTAGTTTG TCATCTCGATACAATAGAGGAAAGCATATTTTTGTTGCTCCTTAGTTCTCCCATGGGTAA AGGCGAAAGTCTGCCGGCTTTGGGGGAAATAGAAGAATAGAGCTTGTTGTACAGTTTTGT GTGTGTGTGTGTGTGTGTGTGTGTTTGTAAGGGAAAAAACAAGAATAATAGAGAAGAAAT GCTTAACACT