Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0571200-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:22806006:22806996:-1 gene:Os09g0571200 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 domain containing protein. (Os09t0571200-01)
Sequence

ATGGCAGCGTCGCGCTACGAGGTGGAGGTGACGGTGGCCTCGGCGCGCGACCTCAAGAAC
GTCAACTGGCGCAACGGCGACCTCAAGCCCTACGCCGTCGTGTGGATCGACGACGGCGCC
AAGTGCTCCACCCGCGTCGACCTCGACAACGCCGACAACCCCACCTGGGATGACAAGCTC
ACCGTCCCTCTCCCGCCCTCCACCCGCCTCGACGACGCCGTCCTCTACCTCGACGTCGTC
CACGCCAACGCCACCGACGGCGTCAAGCCCCTCGTCGGCTCCGCGCGCCTCCCGCTCCGC
GACGTCCTCGCCGACACCGGCATAGGCGCCCGAGCCTCCCGCTCCCTCCGCCTCAAGCGC
CCCTCCGGCCGCCCCCATGGACGCCTCGAAGTCCGCGTCGCCGTCCGCGAGCCCAAGCGC
TACTACGACCCCTCGCCGGCGTACCCTGCTCCCTACCACCAGCAGTCGTCCCGTGACCCC
TACGCCTACGGTAACACTACAACTGGTGGCTATGGCTATGCCTATGGCGGGGCCCCTCCG
GCTCCGTACTCCGCGGCCCCTCCTGCTGGATACCCGTCGGCCTATGGAGGAGCGGCTCCT
ACTCAACCTGCCTATGGCTCCGCCGCGCCACCTCAACCTGCCGCTGTCAGCTATGGAGCG
CCTCCTGTGGATGCAAAGAAGAAGAGCAAGATGGGCATGGGGGGTGGGCTGGCGGTTGGC
GCGGCGGCCGGCGTTCTTGGCGGTCTGGCGCTGGCGGGCGGCGCCAGCTACCTGGAGAAC
AAGTTTGAGGATCGCGTGGCGGAGCGGGTGGAGGAGGACCGCTACGGCGGCGGCGGTGGT
GGCTACGACGACTACGGCGATGACGACTATTAA

Peptide Sequence

PEP ID

Os09t0571200-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:22806006:22806996:-1 gene:Os09g0571200 transcript:Os09t0571200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 domain containing protein. (Os09t0571200-01)
Sequence

MAASRYEVEVTVASARDLKNVNWRNGDLKPYAVVWIDDGAKCSTRVDLDNADNPTWDDKL
TVPLPPSTRLDDAVLYLDVVHANATDGVKPLVGSARLPLRDVLADTGIGARASRSLRLKR
PSGRPHGRLEVRVAVREPKRYYDPSPAYPAPYHQQSSRDPYAYGNTTTGGYGYAYGGAPP
APYSAAPPAGYPSAYGGAAPTQPAYGSAAPPQPAAVSYGAPPVDAKKKSKMGMGGGLAVG
AAAGVLGGLALAGGASYLENKFEDRVAERVEEDRYGGGGGGYDDYGDDDY

Transcript Sequence

Transcript ID

Os09t0571200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:22806006:22806996:-1 gene:Os09g0571200 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 domain containing protein. (Os09t0571200-01)
Sequence

AAAAGCACTAGCCATGGCAGCGTCGCGCTACGAGGTGGAGGTGACGGTGGCCTCGGCGCG
CGACCTCAAGAACGTCAACTGGCGCAACGGCGACCTCAAGCCCTACGCCGTCGTGTGGAT
CGACGACGGCGCCAAGTGCTCCACCCGCGTCGACCTCGACAACGCCGACAACCCCACCTG
GGATGACAAGCTCACCGTCCCTCTCCCGCCCTCCACCCGCCTCGACGACGCCGTCCTCTA
CCTCGACGTCGTCCACGCCAACGCCACCGACGGCGTCAAGCCCCTCGTCGGCTCCGCGCG
CCTCCCGCTCCGCGACGTCCTCGCCGACACCGGCATAGGCGCCCGAGCCTCCCGCTCCCT
CCGCCTCAAGCGCCCCTCCGGCCGCCCCCATGGACGCCTCGAAGTCCGCGTCGCCGTCCG
CGAGCCCAAGCGCTACTACGACCCCTCGCCGGCGTACCCTGCTCCCTACCACCAGCAGTC
GTCCCGTGACCCCTACGCCTACGGTAACACTACAACTGGTGGCTATGGCTATGCCTATGG
CGGGGCCCCTCCGGCTCCGTACTCCGCGGCCCCTCCTGCTGGATACCCGTCGGCCTATGG
AGGAGCGGCTCCTACTCAACCTGCCTATGGCTCCGCCGCGCCACCTCAACCTGCCGCTGT
CAGCTATGGAGCGCCTCCTGTGGATGCAAAGAAGAAGAGCAAGATGGGCATGGGGGGTGG
GCTGGCGGTTGGCGCGGCGGCCGGCGTTCTTGGCGGTCTGGCGCTGGCGGGCGGCGCCAG
CTACCTGGAGAACAAGTTTGAGGATCGCGTGGCGGAGCGGGTGGAGGAGGACCGCTACGG
CGGCGGCGGTGGTGGCTACGACGACTACGGCGATGACGACTATTAATAATTTATATGATA
TTCGAATTGCACTTGCAGGGGAGTCAGATTATTGTAATTGAGTCTTGTGTTTTTATCATC
CTTGTCTTACAAATCAATATCAAATTAAATT