Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0570200-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:22758946:22762537:1 gene:Os09g0570200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os09t0570200-01);Zinc finger, C2H2-type domain containing protein. (Os09t0570200-02)
Sequence

ATGCCCAACGTTAGGTCCTCCCCTGTCGCAGATCTTCCTGGATGGCCATTGTTTTCGCCT
CCTAAGCTTCAGTTGCAAAAGTGTACCAAGTGTCCCAGGGAATTTTGCTCCTCAATCAAC
TACAGGCGCCATACCCGTGTTCACCGCCGAACTCTCCAAATTGAAAAGGATTTCCTGAAG
AACAGAGACAATATTGCTGCATTCTGGGACAAACTTACGTTGGATCAGGCCAAAACAATT
TTGTCCTTGGCAGATGTGGATATAGAGGGTGTCACTGGTCCTTCCATTTTAGCAGCACTG
TCCACATGGATGTGTAAGCCGGGGTATGCTTCATTACCGCTGCCATATGCCAGAGCTGGC
AATCAACTTCTGGACCTAATTGAAACAACAGCTTCAAGGTTACCTGTATCATCGAATGAA
CTATTTAGCATGCTTGACGAAGCAAGTGAGAATACGTTTCTCTCTACTAACCCAACCGCC
TGTATACAAAAGTTTATATTTAACGGGGAGGCTGACAAAGTTGCACCTGAGTTGAAAAAT
GCTGTTGCATGCACTAGTTATATGCTTGAACAAACACTGGTCGAAGCATGGTCTGCTGAT
AAGGCTGCTGAAGCATTAAGATGCCAGAAGTTGCTCGTGGAGGAAGAGGAAGCTGCTCAG
AAAAGGCAAGCTGAACTGATAGAAAGGAAACGGATGAAGAAACTGAGGCAGAAAGAACAG
AGATTGAAAGACTTGAAGGATGAGGATGTCACAGACCGTTTTCCTGGATCTGTGGATGGG
ACAACAGATTCTTCTGGAATACTAAGTCTGAAGGAAGCCACTTCGGATCCTGGCCTTTAT
GAGCAAGAAGATACACAGTTGCCAACGCCAGTGGCTTCGGAAGATAATAGTAGTTTTGCT
GACCTACCTGTAGAACATGACATTCATGATCCAGGCCATGAAGTGAATCCAAGTGTTACT
TTGAATCAACAAGTCTTTTCAAGACATCGTGTAGGAAGAACAGAAAACTTTGCCCAAAAT
AGCTTTGCCTCTGGTGGTTCTGCAATTGGTTCAAAGCATCCAGCTTCAGTAAGGCATTCA
CATTACAGGGGTGCAAATGCCGGTGCAGTGTCAAATAGAAACAAAACATGGACATGGAAA
GTGCGAACTGAGATTGAAGAGCACAGCCCAAAAGATGAGTTGAATATAGATGATGGGCAA
GAGATTGTTCTGAACAAGAAGTCTCGTGTATTAATAGGATCCATAAGTGTTGCCATTGAA
GACGGCAGCGAATGCTTGGAGGATAACCAATATTCCAAGGAATACCCGACTCCTGCTTCT
CAATTGAATATTGGCAACCATCCTGTAACGAAGGTGATGCAGCCATTTAACCATGGAGAA
GAGGGAAACGGATACAATGCTCATAATGATGTTGAAGTTAGTATTACTCCAACAGCACAG
GATCATTCTTCATCCGGCGTTATGACAGATGGAAACAATTGTTCAAGCTGCTGCAATGCA
GGGTTGGCAGAGGGTGGAGGCTTACGAGGCGCCATCTTTTCCAGTAAAGAAGCAGCTGCC
TTCCTTTCTCAAAGATGGAAGGAAGCAATAAACGCAGATCATGTGAAGCTTGTCCTGTGC
CCTGAAGGCTGA

Peptide Sequence

PEP ID

Os09t0570200-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:22758946:22762537:1 gene:Os09g0570200 transcript:Os09t0570200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os09t0570200-01);Zinc finger, C2H2-type domain containing protein. (Os09t0570200-02)
Sequence

MPNVRSSPVADLPGWPLFSPPKLQLQKCTKCPREFCSSINYRRHTRVHRRTLQIEKDFLK
NRDNIAAFWDKLTLDQAKTILSLADVDIEGVTGPSILAALSTWMCKPGYASLPLPYARAG
NQLLDLIETTASRLPVSSNELFSMLDEASENTFLSTNPTACIQKFIFNGEADKVAPELKN
AVACTSYMLEQTLVEAWSADKAAEALRCQKLLVEEEEAAQKRQAELIERKRMKKLRQKEQ
RLKDLKDEDVTDRFPGSVDGTTDSSGILSLKEATSDPGLYEQEDTQLPTPVASEDNSSFA
DLPVEHDIHDPGHEVNPSVTLNQQVFSRHRVGRTENFAQNSFASGGSAIGSKHPASVRHS
HYRGANAGAVSNRNKTWTWKVRTEIEEHSPKDELNIDDGQEIVLNKKSRVLIGSISVAIE
DGSECLEDNQYSKEYPTPASQLNIGNHPVTKVMQPFNHGEEGNGYNAHNDVEVSITPTAQ
DHSSSGVMTDGNNCSSCCNAGLAEGGGLRGAIFSSKEAAAFLSQRWKEAINADHVKLVLC
PEG

Transcript Sequence

Transcript ID

Os09t0570200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:22758946:22762537:1 gene:Os09g0570200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os09t0570200-01);Zinc finger, C2H2-type domain containing protein. (Os09t0570200-02)
Sequence

GTACCCATCCCATCTGCAAACCGAATTTCCGATCGATCCTCCCTTCCCTTCCCTTCCCTT
CCCTTCCTCCTGCGCCGCCGCCGCCGCCTCTCATCTTCGGTTCCAATCCAATCCAAGTGG
CAATTTCTTCGGGTTCAGCAATGCCCAACGTTAGGTCCTCCCCTGTCGCAGATCTTCCTG
GATGGCCATTGTTTTCGCCTCCTAAGCTTCAGTTGCAAAAGTGTACCAAGTGTCCCAGGG
AATTTTGCTCCTCAATCAACTACAGGCGCCATACCCGTGTTCACCGCCGAACTCTCCAAA
TTGAAAAGGATTTCCTGAAGAACAGAGACAATATTGCTGCATTCTGGGACAAACTTACGT
TGGATCAGGCCAAAACAATTTTGTCCTTGGCAGATGTGGATATAGAGGGTGTCACTGGTC
CTTCCATTTTAGCAGCACTGTCCACATGGATGTGTAAGCCGGGGTATGCTTCATTACCGC
TGCCATATGCCAGAGCTGGCAATCAACTTCTGGACCTAATTGAAACAACAGCTTCAAGGT
TACCTGTATCATCGAATGAACTATTTAGCATGCTTGACGAAGCAAGTGAGAATACGTTTC
TCTCTACTAACCCAACCGCCTGTATACAAAAGTTTATATTTAACGGGGAGGCTGACAAAG
TTGCACCTGAGTTGAAAAATGCTGTTGCATGCACTAGTTATATGCTTGAACAAACACTGG
TCGAAGCATGGTCTGCTGATAAGGCTGCTGAAGCATTAAGATGCCAGAAGTTGCTCGTGG
AGGAAGAGGAAGCTGCTCAGAAAAGGCAAGCTGAACTGATAGAAAGGAAACGGATGAAGA
AACTGAGGCAGAAAGAACAGAGATTGAAAGACTTGAAGGATGAGGATGTCACAGACCGTT
TTCCTGGATCTGTGGATGGGACAACAGATTCTTCTGGAATACTAAGTCTGAAGGAAGCCA
CTTCGGATCCTGGCCTTTATGAGCAAGAAGATACACAGTTGCCAACGCCAGTGGCTTCGG
AAGATAATAGTAGTTTTGCTGACCTACCTGTAGAACATGACATTCATGATCCAGGCCATG
AAGTGAATCCAAGTGTTACTTTGAATCAACAAGTCTTTTCAAGACATCGTGTAGGAAGAA
CAGAAAACTTTGCCCAAAATAGCTTTGCCTCTGGTGGTTCTGCAATTGGTTCAAAGCATC
CAGCTTCAGTAAGGCATTCACATTACAGGGGTGCAAATGCCGGTGCAGTGTCAAATAGAA
ACAAAACATGGACATGGAAAGTGCGAACTGAGATTGAAGAGCACAGCCCAAAAGATGAGT
TGAATATAGATGATGGGCAAGAGATTGTTCTGAACAAGAAGTCTCGTGTATTAATAGGAT
CCATAAGTGTTGCCATTGAAGACGGCAGCGAATGCTTGGAGGATAACCAATATTCCAAGG
AATACCCGACTCCTGCTTCTCAATTGAATATTGGCAACCATCCTGTAACGAAGGTGATGC
AGCCATTTAACCATGGAGAAGAGGGAAACGGATACAATGCTCATAATGATGTTGAAGTTA
GTATTACTCCAACAGCACAGGATCATTCTTCATCCGGCGTTATGACAGATGGAAACAATT
GTTCAAGCTGCTGCAATGCAGGGTTGGCAGAGGGTGGAGGCTTACGAGGCGCCATCTTTT
CCAGTAAAGAAGCAGCTGCCTTCCTTTCTCAAAGATGGAAGGAAGCAATAAACGCAGATC
ATGTGAAGCTTGTCCTGTGCCCTGAAGGCTGAAGCAAGTAACGTGGGATCCTGTTGAGCC
GGCGAAGTAGCAAGGGTTGAGTCTGCATCATCAACCAATCGGAGTTACTAGAACTAGTGA
AGTTGGCAGAGGGGGGTTCCTGGCGTGTGGGCACTACTCCGTAGGAAATGAAGTGATGGC
TTTTTGTTAGACGAGCAGGGAATTAAGCTGCATTTTAATTTGGTTTGGAGTAGATGACAG
CCGGGGTTCATGAACATTGAATTTATTTGTTTATATATACAGTTATAGTTATATGATATG
ACAGCCGGTGCGTGCGTTAACATTGGATTCGTTGCAAACATGGACAAGATTAGTGAATGT
TGTGCTGGTTTTGGTTTTGGTTTTGGGTTGCATGTATGTAATTGTAATATACTCCATCAT
ATCATATCAGGAGTAAATGGGGTATTTACTGCTCCCTCCGTTTCTTATGTTTTTATTGTA
AGGCGTATTTTGTTTCGTTTGATCGACGATGACTGAAGAATAGCAATTCAAGAGCAATGT
TTTTTTTTTC