Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0569400-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:22720434:22727500:-1 gene:Os09g0569400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-lactamase-like domain containing protein. (Os09t0569400-01)
Sequence

ATGGGGACGTCGGTGCAGGTGACTCCGTTGAGTGGCGCGTACGGTGAGGGACCCCTCTGC
TACCTGCTCGCCGTCGATGGCTTCCGCTTCCTCCTCGACTGCGGCTGGACCGACCTCTGC
GACCCCTCCCACCTCCAACCCCTCGCCAAGGTTGCACCAACAATAGATGCAGTTCTTTTG
TCTCATGCCGATACCATGCATCTAGGAGCTTTGCCATATGCTATGAAACATCTCGGACTA
TCTGCACCAGTATATGCCACAGAACCTGTATTTAGACTTGGCATTTTAACCTTGTATGAT
TACTTTATATCACGACGGCAAGTTTCAGATTTTGACTTGTTTACTTTGGACGATATTGAT
GCTGCATTCCAAAATGTTGTTAGATTGAAGTACTCACAGAACCACCTTTTGAATGATAAA
GGTGAAGGAATAGTTATTGCTCCACATGTTGCTGGGCATGATTTGGGTGGCACGGTATGG
AAGATAACAAAAGATGGGGAGGATGTTGTTTATGCTGTTGACTTCAACCATCGTAAAGAG
AGGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTCTGATAACTGAT
GCATACAATGCCTTGAACAACCATGTCTACAAAAGGCAGCAGGATCAAGATTTCATTGAT
GCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTGCCGATTGATACAGCTGGT
AGAGTTCTTGAAATTCTTTTGATATTGGAGCAGTACTGGGCTCAACGGCATTTGATCTAC
CCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGATTATGTCAAGAGTTTTCTT
GAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACTAGAGACAATGCCTTCCTA
TTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAAAAGCTGGGAGATGCACCA
AAGGTGGTTCTAGCATCCATGGCAAGCTTGGAGGTTGGCTTTTCTCATGACATATTTGTT
GATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAGAAGGGACAGTTTGGGACA
CTAGCTCGCATGCTCCAAGTAGATCCACCTCCAAAAGCTGTAAAGGTCACTATGAGCAAG
CGAATTCCTTTAGTTGGTGATGAGCTGAAAGCTTACGAAGAAGAACAAGAACGGATAAAA
AAGGAGGAAGCGCTAAAGGCCAGTCTAAACAAAGAGGAGGAAAAGAAGGCGTCTCTTGGA
TCAAACGCAAAGGCTTCTGATCCCATGGTTATTGATGCCAGCACATCTCGCAAACCATCC
AACGCTGGTTCAAAGTTTGGCGGGAATGTGGATATTCTCATTGATGGATTTGTCCCTCCA
TCATCAAGTGTTGCTCCAATGTTTCCTTTCTTTGAAAATACTTCTGAATGGGATGACTTC
GGTGAGGTTATCAACCCTGAAGACTATCTGATGAAGCAAGAAGAAATGGATAATACTTTG
ATGCCCGGTGCTGGGGATGGTATGGATAGTATGCTTGATGAGGGCTCAGCACGCCTACTC
CTTGATTCTACACCCTCAAAAGTTATTTCCAACGAGATGACTGTGCAAGTCAAGTGTTCA
TTAGCATATATGGACTTTGAAGGTCGGTCTGATGGGCGCTCTGTAAAATCTGTTATTGCT
CATGTGGCCCCATTAAAACTTGTTTTGGTTCATGGATCAGCAGAAGCTACTGAGCATTTA
AAAATGCATTGTTCGAAGAACTCAGACTTGCATGTTTATGCTCCTCAGATAGAAGAAACT
ATTGATGTGACATCAGATTTATGTGCTTACAAGGTACAACTTTCGGAGAAGTTAATGAGT
AATGTTATTTCTAAGAAGTTGGGTGAGCATGAAATTGCATGGGTAGATGCAGAGGTTGGA
AAAACAGATGACAAGCTTACTTTGTTGCCCCCGTCGTCAACTCCAGCAGCCCACAAGTCA
GTTCTTGTGGGTGATTTGAAATTGGCTGATTTTAAGCAATTCCTGGCAAATAAAGGTTTG
CAGGTTGAATTTGCTGGTGGTGCTTTACGGTGTGGTGAATACATCACACTGCGCAAGATT
GGTGATGCTGGCCAAAAGGGCAGCACAGGTTCCCAGCAGATTGTGATCGAAGGGCCCCTG
TGTGAGGACTATTACAAGATTCGTGAGCTTCTTTACTCTCAGTTCTACTTGTTGTAA

Peptide Sequence

PEP ID

Os09t0569400-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:22720434:22727500:-1 gene:Os09g0569400 transcript:Os09t0569400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-lactamase-like domain containing protein. (Os09t0569400-01)
Sequence

MGTSVQVTPLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLL
SHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDID
AAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKE
RHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAG
RVLEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFL
LKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGT
LARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEALKASLNKEEEKKASLG
SNAKASDPMVIDASTSRKPSNAGSKFGGNVDILIDGFVPPSSSVAPMFPFFENTSEWDDF
GEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTVQVKCS
LAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKNSDLHVYAPQIEET
IDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKTDDKLTLLPPSSTPAAHKS
VLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITLRKIGDAGQKGSTGSQQIVIEGPL
CEDYYKIRELLYSQFYLL

Transcript Sequence

Transcript ID

Os09t0569400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:22720434:22727500:-1 gene:Os09g0569400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-lactamase-like domain containing protein. (Os09t0569400-01)
Sequence

CTTGGACTCTTTCTCTCTCATTCCACTTCTTGCTCGCCGCCGCCGCCGCCGCCGCCGCCG
GCGAAGGGGATCGATCGGATGGGGACGTCGGTGCAGGTGACTCCGTTGAGTGGCGCGTAC
GGTGAGGGACCCCTCTGCTACCTGCTCGCCGTCGATGGCTTCCGCTTCCTCCTCGACTGC
GGCTGGACCGACCTCTGCGACCCCTCCCACCTCCAACCCCTCGCCAAGGTTGCACCAACA
ATAGATGCAGTTCTTTTGTCTCATGCCGATACCATGCATCTAGGAGCTTTGCCATATGCT
ATGAAACATCTCGGACTATCTGCACCAGTATATGCCACAGAACCTGTATTTAGACTTGGC
ATTTTAACCTTGTATGATTACTTTATATCACGACGGCAAGTTTCAGATTTTGACTTGTTT
ACTTTGGACGATATTGATGCTGCATTCCAAAATGTTGTTAGATTGAAGTACTCACAGAAC
CACCTTTTGAATGATAAAGGTGAAGGAATAGTTATTGCTCCACATGTTGCTGGGCATGAT
TTGGGTGGCACGGTATGGAAGATAACAAAAGATGGGGAGGATGTTGTTTATGCTGTTGAC
TTCAACCATCGTAAAGAGAGGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCA
GCTGTTCTGATAACTGATGCATACAATGCCTTGAACAACCATGTCTACAAAAGGCAGCAG
GATCAAGATTTCATTGATGCATTAGTGAAAGTTCTAACTGGTGGTGGTAGTGTGTTACTG
CCGATTGATACAGCTGGTAGAGTTCTTGAAATTCTTTTGATATTGGAGCAGTACTGGGCT
CAACGGCATTTGATCTACCCTATCTACTTTCTGACAAATGTTTCTACGAGTACTGTTGAT
TATGTCAAGAGTTTTCTTGAATGGATGAATGATTCAATCTCAAAGTCTTTTGAACACACT
AGAGACAATGCCTTCCTATTAAAATGTGTTACACAGATAATAAACAAAGATGAGCTTGAA
AAGCTGGGAGATGCACCAAAGGTGGTTCTAGCATCCATGGCAAGCTTGGAGGTTGGCTTT
TCTCATGACATATTTGTTGATATGGCAAATGAAGCAAAGAATCTAGTACTTTTTACTGAG
AAGGGACAGTTTGGGACACTAGCTCGCATGCTCCAAGTAGATCCACCTCCAAAAGCTGTA
AAGGTCACTATGAGCAAGCGAATTCCTTTAGTTGGTGATGAGCTGAAAGCTTACGAAGAA
GAACAAGAACGGATAAAAAAGGAGGAAGCGCTAAAGGCCAGTCTAAACAAAGAGGAGGAA
AAGAAGGCGTCTCTTGGATCAAACGCAAAGGCTTCTGATCCCATGGTTATTGATGCCAGC
ACATCTCGCAAACCATCCAACGCTGGTTCAAAGTTTGGCGGGAATGTGGATATTCTCATT
GATGGATTTGTCCCTCCATCATCAAGTGTTGCTCCAATGTTTCCTTTCTTTGAAAATACT
TCTGAATGGGATGACTTCGGTGAGGTTATCAACCCTGAAGACTATCTGATGAAGCAAGAA
GAAATGGATAATACTTTGATGCCCGGTGCTGGGGATGGTATGGATAGTATGCTTGATGAG
GGCTCAGCACGCCTACTCCTTGATTCTACACCCTCAAAAGTTATTTCCAACGAGATGACT
GTGCAAGTCAAGTGTTCATTAGCATATATGGACTTTGAAGGTCGGTCTGATGGGCGCTCT
GTAAAATCTGTTATTGCTCATGTGGCCCCATTAAAACTTGTTTTGGTTCATGGATCAGCA
GAAGCTACTGAGCATTTAAAAATGCATTGTTCGAAGAACTCAGACTTGCATGTTTATGCT
CCTCAGATAGAAGAAACTATTGATGTGACATCAGATTTATGTGCTTACAAGGTACAACTT
TCGGAGAAGTTAATGAGTAATGTTATTTCTAAGAAGTTGGGTGAGCATGAAATTGCATGG
GTAGATGCAGAGGTTGGAAAAACAGATGACAAGCTTACTTTGTTGCCCCCGTCGTCAACT
CCAGCAGCCCACAAGTCAGTTCTTGTGGGTGATTTGAAATTGGCTGATTTTAAGCAATTC
CTGGCAAATAAAGGTTTGCAGGTTGAATTTGCTGGTGGTGCTTTACGGTGTGGTGAATAC
ATCACACTGCGCAAGATTGGTGATGCTGGCCAAAAGGGCAGCACAGGTTCCCAGCAGATT
GTGATCGAAGGGCCCCTGTGTGAGGACTATTACAAGATTCGTGAGCTTCTTTACTCTCAG
TTCTACTTGTTGTAAAATGTAATGGACCGGACCATGGCATCTCTTTCCTTTCGTGTTGAT
GTTGTTGTACACGGAGGAACCGTTAATCCATTTGGATCTGAGCGCCAGAATATGCTGTTT
GTTGCTCT