Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0569200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22713282:22716538:1 gene:Os09g0569200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase). (Os09t0569200-01)
Sequence	ATGATTTCTTCTCCTGCGCTCTTCTTCCTCCTCCAGCCAGGCCGCCCCTCCATCGCCGCG CCGCCGCTCCCCTCCTCGCCGGCGCCTCCCCTCCGCGGCATCTCCATCTCCCCCGTCGCC GCCCGCCCCATCTCCTCCCTCCGCTCCTCCTCCTCCATCAGGATCATCTCGCCGCCGCAC GCCCTCCCCGACCCGCTCCTCTCCCTCCCGTCCATGGACCCCCAAGAGGTGCCCGATCTG CTGCCCCCGCGCCCACCGGAGCGCGACTTCGCCGGAACGCCATACGTCCCCGTCTATGTC ATGCTCCCGCTTGGAGTGGTCAATGGTAATGGCGAGGTGGTCGACGCCGACGTCTTGGTG GGCCAGCTTCGGGTACTCAAGGCTGCCGGCGTCGATGGGGTCATGGTCGATTGCTGGTGG GGGAATGTCGAGGCCCACAGGCCGCAGGAGTACAATTGGACCGGTTACAAGCGACTCTTC CATATGATCAGGGAGCTCAAGCTCAAGCTGCAGGTGGTCATGTCATTCCATGAGTGTGGA GGCAATGTTGGAGATGATGTGTCTATTCCTCTCCCACATTGGGTAACAGAGATCGGAAGA AGCAATCCAGATATCTACTTCACCGACAGGGCTGGCAGGCGTAACACGGAGTGCCTTTCA TGGGGCATTGATAAAGAAAGGGTTCTTCAAGGACGGACAGGGGTCGAGGTATACTTTGAC TACATGAGAAGCTTCCGAGTAGAATTTGATGAATATTTTGAGGATGGTATCATTTCAGAA ATTGAGATTGGGCTAGGGGCTTGTGGAGAGTTGAGGTATCCATCTTATCCAGCAAAACAT GGGTGGAAATACCCTGGCATTGGAGAATTTCAGTGCTACGACAGATACTTACAGAAAAGT TTAAGAAGAGCTGCAGAAGCACGAGGACATACCATATGGGCAAGAGCGCCAGACAGTGCA GGCCATTATAATTCTGAGCCAAATCTGACTGGATTTTTCTCTGACGGAGGAGATTATGAT AGCTACTATGGTCGTTTTTTCCTCAATTGGTATTCCCAGGTGTTGGTGGATCATGCTGAC CGTGTATTGATGTTAGCCAGGTTGGCTTTTGAAGGTTCAGATATTGCTGTTAAGGTTTCA GGTGTACACTGGTGGTACAAAACTGCCAGTCATGCTGCTGAATTGACTGCTGGGTTTTAT AACCCATGCAACCGTGATGGTTATGCCTCAATTGCTGCTGTCCTGAAAAAACATGGTGCA GCTTTGAACTTTACATGTGTTGAACTGCGCACTATGGATCAGCATGAGGTATTTCCTGAG GCCTTTGCAGATCCAGAGGGCCTTGTATGGCAGGTGCTAAATGCTGCATGGGATGCTGGC ATACCAGTAGCTAGTGAGAATGCTCTGCCTTGCTACGATAGAGATGGCTTTAACAAAATT TTGGAGAATGCAAAGCCACTGAATGATCCAGATGGGAGGCATTTACTAGGATTCACGTAC CTGAGGCTCACCAAAGTCCTCTTCGAGAGAGCTAATTTTTTGGAATTTGAGCGTTTCGTT AAGAGAATGCATGGTGAAGCAGTTCTCGATCTACAGGTATAA

Peptide Sequence

PEP ID	Os09t0569200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22713282:22716538:1 gene:Os09g0569200 transcript:Os09t0569200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase). (Os09t0569200-01)
Sequence	MISSPALFFLLQPGRPSIAAPPLPSSPAPPLRGISISPVAARPISSLRSSSSIRIISPPH ALPDPLLSLPSMDPQEVPDLLPPRPPERDFAGTPYVPVYVMLPLGVVNGNGEVVDADVLV GQLRVLKAAGVDGVMVDCWWGNVEAHRPQEYNWTGYKRLFHMIRELKLKLQVVMSFHECG GNVGDDVSIPLPHWVTEIGRSNPDIYFTDRAGRRNTECLSWGIDKERVLQGRTGVEVYFD YMRSFRVEFDEYFEDGIISEIEIGLGACGELRYPSYPAKHGWKYPGIGEFQCYDRYLQKS LRRAAEARGHTIWARAPDSAGHYNSEPNLTGFFSDGGDYDSYYGRFFLNWYSQVLVDHAD RVLMLARLAFEGSDIAVKVSGVHWWYKTASHAAELTAGFYNPCNRDGYASIAAVLKKHGA ALNFTCVELRTMDQHEVFPEAFADPEGLVWQVLNAAWDAGIPVASENALPCYDRDGFNKI LENAKPLNDPDGRHLLGFTYLRLTKVLFERANFLEFERFVKRMHGEAVLDLQV

Transcript Sequence

Transcript ID	Os09t0569200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22713282:22716538:1 gene:Os09g0569200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase). (Os09t0569200-01)
Sequence	GGGCTAATCATAATAATCATGATTTCTTCTCCTGCGCTCTTCTTCCTCCTCCAGCCAGGC CGCCCCTCCATCGCCGCGCCGCCGCTCCCCTCCTCGCCGGCGCCTCCCCTCCGCGGCATC TCCATCTCCCCCGTCGCCGCCCGCCCCATCTCCTCCCTCCGCTCCTCCTCCTCCATCAGG ATCATCTCGCCGCCGCACGCCCTCCCCGACCCGCTCCTCTCCCTCCCGTCCATGGACCCC CAAGAGGTGCCCGATCTGCTGCCCCCGCGCCCACCGGAGCGCGACTTCGCCGGAACGCCA TACGTCCCCGTCTATGTCATGCTCCCGCTTGGAGTGGTCAATGGTAATGGCGAGGTGGTC GACGCCGACGTCTTGGTGGGCCAGCTTCGGGTACTCAAGGCTGCCGGCGTCGATGGGGTC ATGGTCGATTGCTGGTGGGGGAATGTCGAGGCCCACAGGCCGCAGGAGTACAATTGGACC GGTTACAAGCGACTCTTCCATATGATCAGGGAGCTCAAGCTCAAGCTGCAGGTGGTCATG TCATTCCATGAGTGTGGAGGCAATGTTGGAGATGATGTGTCTATTCCTCTCCCACATTGG GTAACAGAGATCGGAAGAAGCAATCCAGATATCTACTTCACCGACAGGGCTGGCAGGCGT AACACGGAGTGCCTTTCATGGGGCATTGATAAAGAAAGGGTTCTTCAAGGACGGACAGGG GTCGAGGTATACTTTGACTACATGAGAAGCTTCCGAGTAGAATTTGATGAATATTTTGAG GATGGTATCATTTCAGAAATTGAGATTGGGCTAGGGGCTTGTGGAGAGTTGAGGTATCCA TCTTATCCAGCAAAACATGGGTGGAAATACCCTGGCATTGGAGAATTTCAGTGCTACGAC AGATACTTACAGAAAAGTTTAAGAAGAGCTGCAGAAGCACGAGGACATACCATATGGGCA AGAGCGCCAGACAGTGCAGGCCATTATAATTCTGAGCCAAATCTGACTGGATTTTTCTCT GACGGAGGAGATTATGATAGCTACTATGGTCGTTTTTTCCTCAATTGGTATTCCCAGGTG TTGGTGGATCATGCTGACCGTGTATTGATGTTAGCCAGGTTGGCTTTTGAAGGTTCAGAT ATTGCTGTTAAGGTTTCAGGTGTACACTGGTGGTACAAAACTGCCAGTCATGCTGCTGAA TTGACTGCTGGGTTTTATAACCCATGCAACCGTGATGGTTATGCCTCAATTGCTGCTGTC CTGAAAAAACATGGTGCAGCTTTGAACTTTACATGTGTTGAACTGCGCACTATGGATCAG CATGAGGTATTTCCTGAGGCCTTTGCAGATCCAGAGGGCCTTGTATGGCAGGTGCTAAAT GCTGCATGGGATGCTGGCATACCAGTAGCTAGTGAGAATGCTCTGCCTTGCTACGATAGA GATGGCTTTAACAAAATTTTGGAGAATGCAAAGCCACTGAATGATCCAGATGGGAGGCAT TTACTAGGATTCACGTACCTGAGGCTCACCAAAGTCCTCTTCGAGAGAGCTAATTTTTTG GAATTTGAGCGTTTCGTTAAGAGAATGCATGGTGAAGCAGTTCTCGATCTACAGGTATAA GTTGTGTTCAGGGTTCTTACATACATACATATATATACATGCCATTGTAATTGGCATAGG CCTTATGGCTTATGATGGGGGAACAGAGATGCCATTTTTGTTTCGTAGGTTGTTGTAGTA TACCATCAGCAGATTTTTGAACTATAGAGGGTTTGGCTCCATGGTGTAAAGCATACCCTT GGCAAAGAGTTGTCATGCAGAAAATTGATGGTTTCATTCGGAATGAGGTTGGAAGCAGGT GTATTTCTTTCGATGCGGCAGACATATTTGATTTGTCATGAGATGAGGATTGGGTGAGCA GGTGGTATCCTTCTGAAAGATTTGAGGCTGTATTGAAGAGAATGTGCTGATGCATGTTTA TCATGGAGCAAGCGACATTAATGGAGTTAGCAAAGGTTCTCGCGGTGTATGTGTTTGTAT TTGTTGGTGGAATGTCACTCGAGGATCTTGGCTGTATACAATACATACATGTGCTTTTTT TTGGGTCTTTTCTACAGTGTATGAGAAATGCATGTTTCTTACTG