Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0568200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22690177:22691820:-1 gene:Os09g0568200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP3L SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to DNA polymerase epsilon subunit 3. (Os09t0568200-01)
Sequence	ATGGCGGAGGCGGAGGTGGAGGAGCTGCCCAAGGCCATCGTGCGGCGCCTAGTGAAGGAG AAGCTCGCCCAGGTCGCCGCCGGAGGGGCCGAGGTCATCGTCAACAAGGACGCCATGTCC GCCTTCGCCGAGAGCGCCCGCATCTTCATCCACTACCTCTCCGCCACTGCCAATGACATG TGCAAAGAATCAAAGAGGCAGACGATCAACGCTGATGATGTCCTCAAGGCACTCGATGAA ATGGAGTTCCCTGAGTTTGTAGAGCCCCTTAATACTTCTTTGCAAGAATTTAGGAACAAA AATGCCGCCCGGAGATCAGAAACAACCCAAAAGAAAGCTGAAAAGAGAAGGAAAATAGAT AAGGAGTCACTGCCACAAGAACAAAACGATGCAGCTGATCATGGCAAGACTGATGAGGAT TAA

Peptide Sequence

PEP ID	Os09t0568200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22690177:22691820:-1 gene:Os09g0568200 transcript:Os09t0568200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP3L SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to DNA polymerase epsilon subunit 3. (Os09t0568200-01)
Sequence	MAEAEVEELPKAIVRRLVKEKLAQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATANDM CKESKRQTINADDVLKALDEMEFPEFVEPLNTSLQEFRNKNAARRSETTQKKAEKRRKID KESLPQEQNDAADHGKTDED

Transcript Sequence

Transcript ID	Os09t0568200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22690177:22691820:-1 gene:Os09g0568200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP3L SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to DNA polymerase epsilon subunit 3. (Os09t0568200-01)
Sequence	GGGGGAAGGTGGGGGATCCCATTCCCAACCTGAGAAGCAGCCGGGCCAAGCGGCGGCGGC GGCGTCCATGGCGGAGGCGGAGGTGGAGGAGCTGCCCAAGGCCATCGTGCGGCGCCTAGT GAAGGAGAAGCTCGCCCAGGTCGCCGCCGGAGGGGCCGAGGTCATCGTCAACAAGGACGC CATGTCCGCCTTCGCCGAGAGCGCCCGCATCTTCATCCACTACCTCTCCGCCACTGCCAA TGACATGTGCAAAGAATCAAAGAGGCAGACGATCAACGCTGATGATGTCCTCAAGGCACT CGATGAAATGGAGTTCCCTGAGTTTGTAGAGCCCCTTAATACTTCTTTGCAAGAATTTAG GAACAAAAATGCCGCCCGGAGATCAGAAACAACCCAAAAGAAAGCTGAAAAGAGAAGGAA AATAGATAAGGAGTCACTGCCACAAGAACAAAACGATGCAGCTGATCATGGCAAGACTGA TGAGGATTAACATTTCTGGAAACCGGGCAGTTCTATGCTGAATCTGAAATACGCTAGCAT TACGCCCCTTTGCGGTGTAAACGCTGTGTGGTGCTTGTTTCCATATGTCAGTTTGCAGTG AAAAATATTTGTAGACTTGATCAGATGCTGCATAATTCATCTGTGTTAGCTCCTTCTGTC GATCATAGTTAAGGCACTTGGCGGCTTCATCAGTTGACAAATTCCTGTTTAAACCATTCA AAAGGGGCAGACACCGTTGAAGCGGTGTTTTCAGGACAATATAAGCCTGAAAATGCACCA CTTTGGCTTTGATAC