Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0566550-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22601494:22608364:-1 gene:Os09g0566550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to serine/threonine protein kinase 1, CTR1. (Os09t0566550-01)
Sequence	ATGGACCTCCCCGCCGTCACCGGCCGCCGCACCACCTCCTACTCCCTCCTCTCCCAGTTC CCCGACGACGCCGCCGTGCTCCAGCGCCAGTCCAGCGGCAGCAGCTACGGCGCCGGCAGC TCCCTCTCCGCCTCCAGCGACTTCCCCTTCCACCTCCCTTCCGCCGCCGCCCCCGCCGCC GGGGCCCCCGGGGGCTCCCCCTGCAAGAGCTGGGCGCAGCAGGCCGAGGAGACGTACCAG CTCCAGCTCGCCCTCGCGCTCCGCCTCTGCGCCGACGCCGCCTCCGCCGCCGACCCCGCC TTCCTCGACCCCGGCCACTCTGCCACCGCCACCGCCGGGCCCTTCCCGCTCCCACCCCCG ACGCCTTCTGCCGACTCCCTCTCGCATCGCTTCTGGGTCAATGGCTCGTTATCGTACAGC AATACCATACCAGATGGTTTTTACTTGATTCATGGCATGGACCCCTTTGTCTGGTCACTC TGCACTGATCTACTCGAGGAGAACCGCATACCTTCTATTGATTCACTCAAGTCTGTCCGC CCAGATGATTCTTCCATGCAAGCCATTCTCATCGATAGAAGAACCGATTTCGATTTAGGT ATGCTGGAGAATTACGCTTCCAGCTTCTTGTCCAGTTCTGCCGACATGAAGGATGTGATA AACCAGCTAGCCAAGCTTGTGTCTTCCAGAATGGGGGGTACAACCTCCAATGAAGAGAGT TTTCTTCCACGCTGGAAAGAGTGCAGTGATGCTATCAAGTCAAGTACAGGGTCTATCGTT CTCCATCTGGGAAAGTTACCTATCGGTTTCTGCAAACACCGCTCTTTGCTATTTAAAATG TTAGCAGATAAAGTCAATGTTCCATGCAGAGTAGTCAAGGGCTGTAAATACTGCAAAAGT GATGATGCCACCTCCTGCCTCGTACGCTTTGGGCTTGAAAGGGAGTATTTGGTTGATCTA ATTGGGGATCCAGGCCAATTATCTGATCCTGATTCGTTTGTCAATGGACCCTACTCACTA TCAGTGCCCTCACCTCTCCGGCCTCCAAAATTTAGGTCATTGGAGATCACATCAAATTTC AGCTCGGTTGCCAAGCAGTATTTCTCAGATTGTCACTCTCTCAATCTCTTATTTAACGAA GCTTCCACAGGTGCTAATAGTAATGCGGCAGTTGCTATGGACCAACCGTATTCTACTAGA AAGCATGACACAAGGGATGACATTATGAGCAGCTGGGTGCCAGTAAAAGGTCAAGCAGCT GTAAGCTCAGATGCTATTCTGCCAGAGGCTCCCCGAGAAGTTTTACCGCTTATTACTTCC TCCAACTTGAAAGCTGAGAAAAAGAAAGAGTTTAAATTAATAGAGGGGAATCAGTACTTA CGAAGTACAGTCAGTGATCTCTCACTTGCTGTGGATGATCTGATCATTCCATGGAACGAA TTGATTTTGAAGGAGAAGATTGGAGCAGGTTCATTTGGAACAGTTCATCGTGCTGACTGG AATGGATCGGATGTTGCTGTGAAGATACTTATGGAGCAGGATTTTCATCCAGATCGCTTC AGGGAGTTTATGAGAGAGGTTGCAATAATGAAAAGCCTGAGACATCCAAATATTGTTCTT TTCATGGGTGCTGTTACTGAGCCTCCCAACCTATCAATAGTTACAGAATACTTGTCAAGA GGTAGTTTGTACAAATTATTGCACAGGAGTGGTGCGAAGGAAGTTCTTGATGAAAGACGT CGCTTGAACATGGCATTTGATGTGGCAAAGGGAATGAACTATCTACATAAACGTAGCCCT CCTATTGTTCATCGTGATTTGAAGTCTCCAAATCTTCTAGTTGACAAGAAGTATACCGTG AAAGTATGTGACTTTGGCCTTTCACGACTAAAAGCCAACACCTTTTTGTCCTCCAAGTCT TTGGCAGGAACTCCCGAATGGATGGCACCTGAAGTGCTCCGAGATGAACCATCCAATGAG AAATCTGATGTCTACAGTTTTGGTGTAATCCTATGGGAACTTATGACAATGCAACAACCA TGGTGTAATCTGAATCCTGCCCAGGTAGTCGCTGCTGTAGGCTTTAAAGGCAGGAGACTT GATATCCCAAAAGATTTAAATCCTCAAGTGGCTGCATTAATTGAGTCGTGCTGGGCAAAT GAGCCATGGCGGAGACCTTCATTTGCTAATATTATGGATAGTTTGAGATCTTTAATTAAG GTTCCACTGCCGCAGTTGATTCGTTCAGACTCATAG

Peptide Sequence

PEP ID	Os09t0566550-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22601494:22608364:-1 gene:Os09g0566550 transcript:Os09t0566550-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to serine/threonine protein kinase 1, CTR1. (Os09t0566550-01)
Sequence	MDLPAVTGRRTTSYSLLSQFPDDAAVLQRQSSGSSYGAGSSLSASSDFPFHLPSAAAPAA GAPGGSPCKSWAQQAEETYQLQLALALRLCADAASAADPAFLDPGHSATATAGPFPLPPP TPSADSLSHRFWVNGSLSYSNTIPDGFYLIHGMDPFVWSLCTDLLEENRIPSIDSLKSVR PDDSSMQAILIDRRTDFDLGMLENYASSFLSSSADMKDVINQLAKLVSSRMGGTTSNEES FLPRWKECSDAIKSSTGSIVLHLGKLPIGFCKHRSLLFKMLADKVNVPCRVVKGCKYCKS DDATSCLVRFGLEREYLVDLIGDPGQLSDPDSFVNGPYSLSVPSPLRPPKFRSLEITSNF SSVAKQYFSDCHSLNLLFNEASTGANSNAAVAMDQPYSTRKHDTRDDIMSSWVPVKGQAA VSSDAILPEAPREVLPLITSSNLKAEKKKEFKLIEGNQYLRSTVSDLSLAVDDLIIPWNE LILKEKIGAGSFGTVHRADWNGSDVAVKILMEQDFHPDRFREFMREVAIMKSLRHPNIVL FMGAVTEPPNLSIVTEYLSRGSLYKLLHRSGAKEVLDERRRLNMAFDVAKGMNYLHKRSP PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSLAGTPEWMAPEVLRDEPSNE KSDVYSFGVILWELMTMQQPWCNLNPAQVVAAVGFKGRRLDIPKDLNPQVAALIESCWAN EPWRRPSFANIMDSLRSLIKVPLPQLIRSDS

Transcript Sequence

Transcript ID	Os09t0566550-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22601494:22608364:-1 gene:Os09g0566550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to serine/threonine protein kinase 1, CTR1. (Os09t0566550-01)
Sequence	ACCCGACCCGACGCATTTCCCACCAAAATTACCTATCACCACCACGGCTAGGGTTTCGCC GCCGCCATGGACCTCCCCGCCGTCACCGGCCGCCGCACCACCTCCTACTCCCTCCTCTCC CAGTTCCCCGACGACGCCGCCGTGCTCCAGCGCCAGTCCAGCGGCAGCAGCTACGGCGCC GGCAGCTCCCTCTCCGCCTCCAGCGACTTCCCCTTCCACCTCCCTTCCGCCGCCGCCCCC GCCGCCGGGGCCCCCGGGGGCTCCCCCTGCAAGAGCTGGGCGCAGCAGGCCGAGGAGACG TACCAGCTCCAGCTCGCCCTCGCGCTCCGCCTCTGCGCCGACGCCGCCTCCGCCGCCGAC CCCGCCTTCCTCGACCCCGGCCACTCTGCCACCGCCACCGCCGGGCCCTTCCCGCTCCCA CCCCCGACGCCTTCTGCCGACTCCCTCTCGCATCGCTTCTGGGTCAATGGCTCGTTATCG TACAGCAATACCATACCAGATGGTTTTTACTTGATTCATGGCATGGACCCCTTTGTCTGG TCACTCTGCACTGATCTACTCGAGGAGAACCGCATACCTTCTATTGATTCACTCAAGTCT GTCCGCCCAGATGATTCTTCCATGCAAGCCATTCTCATCGATAGAAGAACCGATTTCGAT TTAGGTATGCTGGAGAATTACGCTTCCAGCTTCTTGTCCAGTTCTGCCGACATGAAGGAT GTGATAAACCAGCTAGCCAAGCTTGTGTCTTCCAGAATGGGGGGTACAACCTCCAATGAA GAGAGTTTTCTTCCACGCTGGAAAGAGTGCAGTGATGCTATCAAGTCAAGTACAGGGTCT ATCGTTCTCCATCTGGGAAAGTTACCTATCGGTTTCTGCAAACACCGCTCTTTGCTATTT AAAATGTTAGCAGATAAAGTCAATGTTCCATGCAGAGTAGTCAAGGGCTGTAAATACTGC AAAAGTGATGATGCCACCTCCTGCCTCGTACGCTTTGGGCTTGAAAGGGAGTATTTGGTT GATCTAATTGGGGATCCAGGCCAATTATCTGATCCTGATTCGTTTGTCAATGGACCCTAC TCACTATCAGTGCCCTCACCTCTCCGGCCTCCAAAATTTAGGTCATTGGAGATCACATCA AATTTCAGCTCGGTTGCCAAGCAGTATTTCTCAGATTGTCACTCTCTCAATCTCTTATTT AACGAAGCTTCCACAGGTGCTAATAGTAATGCGGCAGTTGCTATGGACCAACCGTATTCT ACTAGAAAGCATGACACAAGGGATGACATTATGAGCAGCTGGGTGCCAGTAAAAGGTCAA GCAGCTGTAAGCTCAGATGCTATTCTGCCAGAGGCTCCCCGAGAAGTTTTACCGCTTATT ACTTCCTCCAACTTGAAAGCTGAGAAAAAGAAAGAGTTTAAATTAATAGAGGGGAATCAG TACTTACGAAGTACAGTCAGTGATCTCTCACTTGCTGTGGATGATCTGATCATTCCATGG AACGAATTGATTTTGAAGGAGAAGATTGGAGCAGGTTCATTTGGAACAGTTCATCGTGCT GACTGGAATGGATCGGATGTTGCTGTGAAGATACTTATGGAGCAGGATTTTCATCCAGAT CGCTTCAGGGAGTTTATGAGAGAGGTTGCAATAATGAAAAGCCTGAGACATCCAAATATT GTTCTTTTCATGGGTGCTGTTACTGAGCCTCCCAACCTATCAATAGTTACAGAATACTTG TCAAGAGGTAGTTTGTACAAATTATTGCACAGGAGTGGTGCGAAGGAAGTTCTTGATGAA AGACGTCGCTTGAACATGGCATTTGATGTGGCAAAGGGAATGAACTATCTACATAAACGT AGCCCTCCTATTGTTCATCGTGATTTGAAGTCTCCAAATCTTCTAGTTGACAAGAAGTAT ACCGTGAAAGTATGTGACTTTGGCCTTTCACGACTAAAAGCCAACACCTTTTTGTCCTCC AAGTCTTTGGCAGGAACTCCCGAATGGATGGCACCTGAAGTGCTCCGAGATGAACCATCC AATGAGAAATCTGATGTCTACAGTTTTGGTGTAATCCTATGGGAACTTATGACAATGCAA CAACCATGGTGTAATCTGAATCCTGCCCAGGTAGTCGCTGCTGTAGGCTTTAAAGGCAGG AGACTTGATATCCCAAAAGATTTAAATCCTCAAGTGGCTGCATTAATTGAGTCGTGCTGG GCAAATGAGCCATGGCGGAGACCTTCATTTGCTAATATTATGGATAGTTTGAGATCTTTA ATTAAGGTTCCACTGCCGCAGTTGATTCGTTCAGACTCATAGCCATTTGTATATTGAAGA GTCATATCATGATTTGCCTTGATAAGATCAACATGGAGAAGTTTTTCAATATCTGACTTG CTTATACTTGGATAATTCTGACCACATTATTTGGTGCTAAGAAAATGGAGTCTTGATTTA CATTTTTCAAGCAAAACAAAACGTACCTGGCAACTCCTGTCCATGGTTTCAAGATCTGTT GATATTCCTTGTATGAACATCTGGTTGGCCAAGTTATCCATGAGATGCAGCACTTCACTT GTCTGCATCCTTTACTGATAGAGATCTCCGACTGGCTGCAACCTTTGATAAGAACGTCAT CCTTCCCTGTGTTGGTAGCTGAATCACATATTGGAAATGCATGCTGGGAGGTTCATCAAA CTTGAGGATCCTGACTGTAAATTCTAGTCTCTCCTAGATGTCTATGTATAATGTTGACTG CAGTTAGCTATGATGAAAGTAAAGAGGTTTTTTTTTGGCTTATGTACATGTAAGTCTGTT ACACTATCCTAGAGCAGGTAGTACTGTACATATGCTGTACTAGTGCTCCTACATGTGTAT TGCTTGTTGT