Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0565300-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:22507900:22510149:-1 gene:Os09g0565300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-finger protein. (Os09t0565300-01)
Sequence

CTTCCAAGAATCGAGATTTCTCATTGTTGCAGTGTTGCCTCACGTCATGGTTTAATCAGC
GGGTGGAAATTTTCAGGGAAACATTGTTTCAACGGGAGAAGCCTGCATCACATTTCAGAG
GACTCCCTCAACCCGTACGAGCAAGCGATTAGTATCATCGGCAAGACCTTATCGACGTTC
GACGAAGACAACAGGATCCCATGTTTTGGATTTGGGGACAGTAAGCAAAAGCTTCTCCAT
CGTCTTCTAGTTCTTTCTCTCTGCAATCTGCATTTCTCTGTTCAGAAATGA

Peptide Sequence

PEP ID

Os09t0565300-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:22507900:22510149:-1 gene:Os09g0565300 transcript:Os09t0565300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-finger protein. (Os09t0565300-01)
Sequence

LPRIEISHCCSVASRHGLISGWKFSGKHCFNGRSLHHISEDSLNPYEQAISIIGKTLSTF
DEDNRIPCFGFGDSKQKLLHRLLVLSLCNLHFSVQK

Transcript Sequence

Transcript ID

Os09t0565300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:22507900:22510149:-1 gene:Os09g0565300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-finger protein. (Os09t0565300-01)
Sequence

ATCTTCGTGCTGAGCTCTTTCTTCACAGTCTTCTTCTTTCTTCGAGAATCGGCATGTTCT
TTTCTACTTTCTTGCTGCTGTTCTGGACCATTTATTCTTGGACTGTACGCCTGAATAGAG
ATGAGATCGGCAACCTGAGGATCAACAACTCCTGGGATTCGCAGAGATATGATACCTTGG
ATCAGGTCAGTTGCAGCCTGTATGAGTAGTTCTTGAACTGAACTTTTTGCATGATTTGCC
AATTTATCATCCAGTTACTCAGAAGTGTATTGTTGAGTTATCTTTGCATGATTCATCCAT
GCAGGTTAAGGAAGCTCTTGAAAAGGTCGGTCTCGAGTCGTCCAATATTATCATTGGAGT
GGATTTCACCAAAAGCAATGAGTGGACAGGCATATATTTTTAGCTTCCAAGAATCGAGAT
TTCTCATTGTTGCAGTGTTGCCTCACGTCATGGTTTAATCAGCGGGTGGAAATTTTCAGG
GAAACATTGTTTCAACGGGAGAAGCCTGCATCACATTTCAGAGGACTCCCTCAACCCGTA
CGAGCAAGCGATTAGTATCATCGGCAAGACCTTATCGACGTTCGACGAAGACAACAGGAT
CCCATGTTTTGGATTTGGGGACAGTAAGCAAAAGCTTCTCCATCGTCTTCTAGTTCTTTC
TCTCTGCAATCTGCATTTCTCTGTTCAGAAATGAAGTGATTTTCAGCATCGACGCACGAC
CAAAATGTCTTCAGCTTCTACTCGGGCAGGCGACAGTATTGCAATGGTGTTTCTGAAGTT
CTAAGGGGATACAGAGAAATTGCGCCACGTGTCCGGCTGTCAGGTATCTATATTGTGACC
GACGAGTTCATTCTTGCGAAGGATGAACGATGAATTCATCTCTCTTCTTCAGAAAGATAA
CTGGTGAGTTGTGGTTTAGGTCCGACATCTTTAGCTCCAATAATAGAAACTGCAATGAGA
ATAACTCAGGACTCCGGCTACCAGTATCACATCCTACTGATAATAGCTGATGGGCAGGTG
TGCCTTTTTCTCTGAACTTCTGAAAAGAAGTTGCCGTTCTTCCAGAATCTTATTGACACC
TTACCTGTTCCACTAGTTTTTTTTTAATCCATGTATTTTGCTCATGCTACCTCAGGTTCC
AAGATGTTGTGGTGCTAACTCTGCGAACAATCGGGATGAGAACTACCTGGAAGAAAGGAC
TCTACAGGCTCTTGTTCAGGCGAGGTACATAGTGGCAACACTAATTAGATTAGATGTTTC
TGAATTCTATCTAAAAGTACTGACTGAACATAAGGTGCAACTTTTTTCCCTATATTAATA
AACTTCGGCTGGCTTCCGCCAGCCCGGCGAAAAAAAAAACATAAGGTGCAACTTACTATT
CTTTTAAAATATATAGCTATACTTGAATTTGAGTAAGGAAAATGTGTACTTATGCTATGC
ACTCATTTCCCTCTTTCTATCGTGCTTGTCGGAGTGGGCGATGGTCCATGGGATGAGCAG
CTGATGCACTGTCAGGAGGATCGACAGCTGTTTGACAATTTCCAGGTGTTTGTTGGGCAT
CACAACATTGATTTATATGGGAGGATTTGCTCATAATTAAGCTAGTTTTGTCTTCGCAGT
TTGTTGATTTCACCAAAATAATAATGTCAAGAGAAATGCCTGAAACCGAGAAGGAGGAAC
AATTTGCTTTAGAAGCGCTGAAGAAGATACCGAGCCAGTACGCAGCCATAATCAGCAAGA
GGATCAGTGATCTGGCTGCAGATGCGCCTTCAAGGATGCCTCTTCCTCCCCCTCCTCCAA
GGCCTGTTATTTCTACCTAATAATTTTCAGGACAGGTATCTTTCTGAACCAAGATGATTT
TCATTCAACTCAACTTCTGGGAATTGAACTCGACTGAGGAAACTTTGTACAATTGTGTTG
CCCGCAGGGGAAATGACAGATGAATGTACAGTACCGCAAAGCTAGCCCTTGGATTAGTTT
CAGAGCCGGGAGATACTATTAACCTCTTAGGGGAAGGGCAGGCCACTGTAAACCTTTTTA
TTTTACAAAGTGGTTGTGTAGGCAATGCAAGCCTAGTCTGATGACTTAGCAGAATACTAT
TTTAATTTAAATATAATTTACTTCATT