Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0563950-00
CDS Infomation	cds chromosome:IRGSP-1.0:9:22418846:22420093:-1 gene:Os09g0563950 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 505 description:Cyclin-like F-box domain containing protein. (Os09t0563950-00)
Sequence	ATGGCCGGGGACGCCACCACCTGCGTGTCCAGGTGGCCCGACCTCCCGGCCGACCTGATC CGCGAGATCTCCGGCCGCTTCCGCGAAGCCGCCGACTACGTCCACTTCCACGCCGTCTGC AAGCCCTGGCGCGACGCCGTGGTGTCGCCGCCGCCCTTGTTCTTCCCGTGGCTAGTGAGG TGCTTGGACGAGTCCACGCCGCCGTGGCGAGAACCCTGCTGGGCCGACGAGGACAAGCTG CTGTTCCGCTCCGTCTCCGGCCACAAGCAGGCCACCTTCCGCGTCTCCCGCGCCAGCTGC CTCGGCGAGAAGTTCGCCGTGCGCGACACCGACGGCCCAGGCGGGCGCGTCCTCGCCGTC GGCAGCGGCGGGGCCAGCCTCGTGAACCCGCTCACCGGAGCCGCCACCCACCTGCCCCGG TGCTTCCCGGAAAATATGGCCGGCTATCTTGGCAGCGTGGACGGTGTGGTCACCGGCGAC GGCACGGTGCTCCTCTACTACCTGAGCATGAGCAGTTGTACATTCTACCGCGCGGCCATC CTGCGGGCGGGCGACGACGCATGGACCTCTGTGCACACGTGCATAGACTCCGAGACGATG TCGTTCTGGCAGCAGTGGAGCGCCACGTACCACGACGGCAAGGTGATCAACGCGGGCAGG CAATTCTACAGGGTGGGCATGCTCAGCATAGCCCCAGGCGATGTGTTCACCGGGAGACTC GAGAAGAGGTCGCTGCCGCAGCTGTACGACGAACCTGCCTCGTACAGCTACTTCTTCGAG CTCGGCGGCGAGCTGATGTGGGCGTACGTCCATGTCGCGGCGGCGGCGTTGTTGGATCAC GGCCACTACCCTCTCAAGGGAGGCGACCTGGTGGGAAGCGGCGCGGTGAGCTTGTGGGTG TACTCGAGGGAGAAGAAGAGCGGGCGGTGGGTGAAGAGGGAGGGGCGGAGGTTGCTGGGC AGCAGCGTTCTGTTCCTGGGGTGGACGAGCAGCTTCGCCGTGGAGGCGGGGCAGCTGGCC GGCGAGGTGGACGGCGGGTGCGCCTACTTGATGATAGACAGCGTGGGGCGCGGGCTAGGA CGACGAGGGTTCCTGCTCCTGGACAGGTGTACGGTGTACAGGTATAGGTTGGAGGACGAC ACCATCACAATGCTGGATGAACTGCCTCCTGGATGGCTTGCCAGCTGCTGCACTTGGTTC CTACCACGCCCCACCATCCAACCAAAATTATCTAAACCCTATGCCTAA

Peptide Sequence

PEP ID	Os09t0563950-00
PEP Infomation	pep chromosome:IRGSP-1.0:9:22418846:22420093:-1 gene:Os09g0563950 transcript:Os09t0563950-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 505 description:Cyclin-like F-box domain containing protein. (Os09t0563950-00)
Sequence	MAGDATTCVSRWPDLPADLIREISGRFREAADYVHFHAVCKPWRDAVVSPPPLFFPWLVR CLDESTPPWREPCWADEDKLLFRSVSGHKQATFRVSRASCLGEKFAVRDTDGPGGRVLAV GSGGASLVNPLTGAATHLPRCFPENMAGYLGSVDGVVTGDGTVLLYYLSMSSCTFYRAAI LRAGDDAWTSVHTCIDSETMSFWQQWSATYHDGKVINAGRQFYRVGMLSIAPGDVFTGRL EKRSLPQLYDEPASYSYFFELGGELMWAYVHVAAAALLDHGHYPLKGGDLVGSGAVSLWV YSREKKSGRWVKREGRRLLGSSVLFLGWTSSFAVEAGQLAGEVDGGCAYLMIDSVGRGLG RRGFLLLDRCTVYRYRLEDDTITMLDELPPGWLASCCTWFLPRPTIQPKLSKPYA

Transcript Sequence

Transcript ID	Os09t0563950-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22418846:22420093:-1 gene:Os09g0563950 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 505 description:Cyclin-like F-box domain containing protein. (Os09t0563950-00)
Sequence	ATGGCCGGGGACGCCACCACCTGCGTGTCCAGGTGGCCCGACCTCCCGGCCGACCTGATC CGCGAGATCTCCGGCCGCTTCCGCGAAGCCGCCGACTACGTCCACTTCCACGCCGTCTGC AAGCCCTGGCGCGACGCCGTGGTGTCGCCGCCGCCCTTGTTCTTCCCGTGGCTAGTGAGG TGCTTGGACGAGTCCACGCCGCCGTGGCGAGAACCCTGCTGGGCCGACGAGGACAAGCTG CTGTTCCGCTCCGTCTCCGGCCACAAGCAGGCCACCTTCCGCGTCTCCCGCGCCAGCTGC CTCGGCGAGAAGTTCGCCGTGCGCGACACCGACGGCCCAGGCGGGCGCGTCCTCGCCGTC GGCAGCGGCGGGGCCAGCCTCGTGAACCCGCTCACCGGAGCCGCCACCCACCTGCCCCGG TGCTTCCCGGAAAATATGGCCGGCTATCTTGGCAGCGTGGACGGTGTGGTCACCGGCGAC GGCACGGTGCTCCTCTACTACCTGAGCATGAGCAGTTGTACATTCTACCGCGCGGCCATC CTGCGGGCGGGCGACGACGCATGGACCTCTGTGCACACGTGCATAGACTCCGAGACGATG TCGTTCTGGCAGCAGTGGAGCGCCACGTACCACGACGGCAAGGTGATCAACGCGGGCAGG CAATTCTACAGGGTGGGCATGCTCAGCATAGCCCCAGGCGATGTGTTCACCGGGAGACTC GAGAAGAGGTCGCTGCCGCAGCTGTACGACGAACCTGCCTCGTACAGCTACTTCTTCGAG CTCGGCGGCGAGCTGATGTGGGCGTACGTCCATGTCGCGGCGGCGGCGTTGTTGGATCAC GGCCACTACCCTCTCAAGGGAGGCGACCTGGTGGGAAGCGGCGCGGTGAGCTTGTGGGTG TACTCGAGGGAGAAGAAGAGCGGGCGGTGGGTGAAGAGGGAGGGGCGGAGGTTGCTGGGC AGCAGCGTTCTGTTCCTGGGGTGGACGAGCAGCTTCGCCGTGGAGGCGGGGCAGCTGGCC GGCGAGGTGGACGGCGGGTGCGCCTACTTGATGATAGACAGCGTGGGGCGCGGGCTAGGA CGACGAGGGTTCCTGCTCCTGGACAGGTGTACGGTGTACAGGTATAGGTTGGAGGACGAC ACCATCACAATGCTGGATGAACTGCCTCCTGGATGGCTTGCCAGCTGCTGCACTTGGTTC CTACCACGCCCCACCATCCAACCAAAATTATCTAAACCCTATGCCTAA