Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0563800-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22405480:22414370:-1 gene:Os09g0563800 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os09t0563800-01)
Sequence	ATGGTGATCGGTGTGATGTATCCAGGGATGTCATTCCCTTTGTTAGTGAACAAAGAAAAG ATAGGGATCTTCAAGGTTCTAGGAACTCTGCCTATGACTACAGGACAAATTACCTCAGGG ACCAAGATCATGATTTGGAAAGGTAGTGATGAGAAAACTGTTGGAGAGACCCTGTACCCA CCAATCTTACATCCAGTCATTGCAACTCCTCTGCAAATGAAAATGGTGGATGACCCCGCT CTTTCTAATGTGGTTGGCAGAGCCAGTAAGATGATTGGTAATTTCATGAGTTACTATACT CACCTCCCACATGAGGCCACAAAGGGCAAAATGACATTTCTCTTACATGGTCCATGTGAT AAAAAAGCTGTGGTTGAAGGGATAGGAAGGACCCTTGGTCTTCCTGTTGCGAGCGTGGAT GCTTCGTCACTCATCAAGGACTTCCCTTCTGACTCTGTCTCACAGATCAACACCTGCATA CAGAGACCTGAATCACGTGATGGTCCACTTCTGATCTTCCTTGACCGGTTTGATGAGTTG GTCCCTCACAACAGATGTGGTTCAACAGTTATGACTGACATAACAACCACCCAGCTTAAA TTGCTGCTTGATGATCCTTGGGTGATTTTCGGGCATCGTATTACTATTCTGGTAGTATCT GTGAGGTGGATAAACCTGATATGCCCGACTATTCTCTCAAGAATCAGGACACGATTTTAT TGTGGAAATGATGAGAAAGAGGGGGATTGGGATGGTGTTGGAATGTCTCTTCTAAAGTTA TTGGAAACAAACAAGTCGATTGATCCAAATTCACGCTGGGTTGTGACAAATGCCATTCTG TATGGGAACACCTCGCTCAGTAAGAGTGATGTCACCAAACTCTTTGCAGCAACACAGTCA TTCGATTCCATAGTCATTGATGCAATGCAAGTGCTGAAGGATTTTAAAAATACTGGGTCA AAGGCGGTGTCTGACCTGTTCCTGAGAGCTACAGCGAGAAGACCCTGCATTATACTGATT CAACAATTAGATGCTATCAACAACGAAACATTAATCTCCCTGATCTTACACGAGATGAAC AACATGGATAGAGATCTACATGTGTTTGCTTCCACGAGGTGGTGGCAACTCATACACCAT ATGTTTTTGGAGTCACGCCTGTTCACGAGGAGAGTTTTTTGTGGCGTGGATTCAAAAAAA GATGAATGCGATTTTGTGGGCCAAGCTTTATTTGAGATACAACAGAGGATGGGAACAGCA TCAGATAAGAGCACCTCCTCTTAA

Peptide Sequence

PEP ID	Os09t0563800-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22405480:22414370:-1 gene:Os09g0563800 transcript:Os09t0563800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os09t0563800-01)
Sequence	MVIGVMYPGMSFPLLVNKEKIGIFKVLGTLPMTTGQITSGTKIMIWKGSDEKTVGETLYP PILHPVIATPLQMKMVDDPALSNVVGRASKMIGNFMSYYTHLPHEATKGKMTFLLHGPCD KKAVVEGIGRTLGLPVASVDASSLIKDFPSDSVSQINTCIQRPESRDGPLLIFLDRFDEL VPHNRCGSTVMTDITTTQLKLLLDDPWVIFGHRITILVVSVRWINLICPTILSRIRTRFY CGNDEKEGDWDGVGMSLLKLLETNKSIDPNSRWVVTNAILYGNTSLSKSDVTKLFAATQS FDSIVIDAMQVLKDFKNTGSKAVSDLFLRATARRPCIILIQQLDAINNETLISLILHEMN NMDRDLHVFASTRWWQLIHHMFLESRLFTRRVFCGVDSKKDECDFVGQALFEIQQRMGTA SDKSTSS

Transcript Sequence

Transcript ID	Os09t0563800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22405480:22414370:-1 gene:Os09g0563800 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os09t0563800-01)
Sequence	ACCCAGCAGCAGCCATCAGGCCTACCACTACCACCTCATCCTTTGATTCCTCTCCATCTC CAGTACTGCATGCTGCTGCATCCTGCATCCTCCTCCAATCTTCCTCCGTCCCCTTCACCG AGGCATCAGCTAGCATTGACGGATGAGCGGCGCCGTTGGGGAGCCACCGAACACGAAGAC GCCGTCGACGAGCACCCCGGCGCCATGGTTAGAGGAGAGGGGGCAGACAAGGAAGAGGAG GAGGCTCCGCCCACAGAGAAGAAGAGCAGACTCCTACCTTCTATCTCCACCGCTGCGCCT CCATCCTCATCACGCATCTTCTTGCCATCCCGTCGCTCCCAATCTCCACCGAGGTAGGTC AAGGTGGTGATAGAAGAAGGACGCCACCGAGTTCATGGCCAATCTGGAAGAGAGTTGCGC CCTTGCAGCAGTACGATGGTGATCGGTGTGATGTATCCAGGGATGTCATTCCCTTTGTTA GTGAACAAAGAAAAGATAGGGATCTTCAAGGTTCTAGGAACTCTGCCTATGACTACAGGA CAAATTACCTCAGGGACCAAGATCATGATTTGGAAAGGTAGTGATGAGAAAACTGTTGGA GAGACCCTGTACCCACCAATCTTACATCCAGTCATTGCAACTCCTCTGCAAATGAAAATG GTGGATGACCCCGCTCTTTCTAATGTGGTTGGCAGAGCCAGTAAGATGATTGGTAATTTC ATGAGTTACTATACTCACCTCCCACATGAGGCCACAAAGGGCAAAATGACATTTCTCTTA CATGGTCCATGTGATAAAAAAGCTGTGGTTGAAGGGATAGGAAGGACCCTTGGTCTTCCT GTTGCGAGCGTGGATGCTTCGTCACTCATCAAGGACTTCCCTTCTGACTCTGTCTCACAG ATCAACACCTGCATACAGAGACCTGAATCACGTGATGGTCCACTTCTGATCTTCCTTGAC CGGTTTGATGAGTTGGTCCCTCACAACAGATGTGGTTCAACAGTTATGACTGACATAACA ACCACCCAGCTTAAATTGCTGCTTGATGATCCTTGGGTGATTTTCGGGCATCGTATTACT ATTCTGGTAGTATCTGTGAGGTGGATAAACCTGATATGCCCGACTATTCTCTCAAGAATC AGGACACGATTTTATTGTGGAAATGATGAGAAAGAGGGGGATTGGGATGGTGTTGGAATG TCTCTTCTAAAGTTATTGGAAACAAACAAGTCGATTGATCCAAATTCACGCTGGGTTGTG ACAAATGCCATTCTGTATGGGAACACCTCGCTCAGTAAGAGTGATGTCACCAAACTCTTT GCAGCAACACAGTCATTCGATTCCATAGTCATTGATGCAATGCAAGTGCTGAAGGATTTT AAAAATACTGGGTCAAAGGCGGTGTCTGACCTGTTCCTGAGAGCTACAGCGAGAAGACCC TGCATTATACTGATTCAACAATTAGATGCTATCAACAACGAAACATTAATCTCCCTGATC TTACACGAGATGAACAACATGGATAGAGATCTACATGTGTTTGCTTCCACGAGGTGGTGG CAACTCATACACCATATGTTTTTGGAGTCACGCCTGTTCACGAGGAGAGTTTTTTGTGGC GTGGATTCAAAAAAAGATGAATGCGATTTTGTGGGCCAAGCTTTATTTGAGATACAACAG AGGATGGGAACAGCATCAGATAAGAGCACCTCCTCTTAAGGCAAAGGAGGGAGAGGAGAT AAGATAACTCACCATTAGCGAGCTTACTGTATTGGTTATGATGCACTGGTGAAATTCGAC GCCATTAGCTTTTACTGTATGTTTATGATGGGCTGGTAAAATTCAATTCCGTAATCAGTC ATGGTGAGAGTTGTCTGGTAACTGTGAGGAACCTTAATTTTGAGCACTTGTCTGAATTTT TTTTTCTTTCGAGGTAACAGTTCCTAAAACTTGTCAAACTGCTGGCCTGTTGGCCATGCA AATACTCTATTTTGAC