Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0563200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22367879:22373612:-1 gene:Os09g0563200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 18 description:Similar to Potassium transporter 11 (AtPOT11). (Os09t0563200-01)
Sequence	ATGGAGACCAGAACAAATGAGTATTCCCGTAAGGGGGCAATGTGGGAGCTGGAAAGGAAT CTTGATCAACCCATGGATGCAGAGGCTGGAAGACTCAGGAATATGTACAGAGAAAAGACC TATCCAACAATTTTACTGCTACGGCTAGCTTTCCAAAGCCTTGGTGTGGTATTTGGAGAC TTAGGCACATCACCTCTATATGTTTTCTACAATATCTTTCCTCATGGAATAGAAGATACA GAACAAGTTATTGGAGCACTCTCTCTTATAATTTACTCCCTTACACTCATTCCACTTGTT AAATATGTTTTCATTGTCTTGAGAGCAAATGACAATGGCCAAGGAGGAACATTTGCCCTT TATTCACTGCTTTGCCGTCATGCAAAGATAAATATTATTCCAAATCAACATAGAACCGAT CAAGATCTAACAACATACAGTCGCCGCACATATGAAGAAAAGTCTCTTGCTGCCAAAATC CAAAGATGGTTAGAGGGGCACCAATTCAGAAAGAATTTAATTCTTATTCTTGTACTATTT GGAACTTGTATGGCTGTTGGAGATGGAATACTCACTCCTGCCATATCAGTTCTTTCTGCG ACTGGTGGAATACAAGTTGAAGAAGGCAGAATGAGAAATGATGTGGTTGTAATTATCTCC GTGCTGATATTGATTGGACTGTTCAGCATGCAGCACTATGGTACTGATAAAGTCAGCTGG CTCTTTGCACCAATAGTATTTGTTTGGTTCATACTCATTGGGATTCTTGGTGCTGTAAAC ATTTGCAAATATGACCATTCAGTTCTTAAGGCTTTCAATCCTGTCTATGTATATCGTTAC TTTAAACGAGGGAAGACTAGTTGGACTTCTTTAGGTGGAATTATGCTCAGCATAACAGGC ACAGAAGCATTGTTTGCTGACCTTTCGTATTTTCCTGTACAAGCTATTCAGATTGCTTTC ACTGTGGTTGTGTTCCCATGCCTTCTTCTGCAATATACTGGTCAGGCTGCGTTTATAGCT GCAAACACAAACCAAGTCAGCCATGCCTTCTATATCTCCCTTCCAGCTCCTATACTTTGG CCAGCATTTGCCGTTGCAACAGCAGCTGCAATAGTTGCTAGTCAGGCCACTATATCTGCA ACATATTCGATTATCAAGCAAGCACTTGCCCTAGGGTGCTTTCCCCGAGTGAAGATCATC CATACTTCCAAGAAGTATCTCGGCCAGATATACAGCCCTGATATTAACTGGATCCTCATG GTTTTCTGCATAGCTGTCACTGCAGGGTTCAAAAACCAATCCCAGATTGCAAATGCATAT GGTACTGCTGTGATCATGGTTATGCTTGTGACAACATTTCTGATGATCCCCATCATGCTG CTGGTGTGGCGAAGCCATTGGACCCTGGTCGTCGCCTTCACCGTGCTGTCATTGCTTGTG GAGATCCCCTACTTCTCGGCCGTCGTGCGCAAGATCGATCAGGGAGGATGGGTTCCGCTG GTTTTCGCGGCAGGCTTCATGATCATCATGTATGTCTGGCACTACGGCACCCTGAAGCGG TACGAGTTTGAGATGCACAGCAAGGTGTCCATGGCCTGGATCCTGGGGCTTGGTCCGAGC CTTGGCCTTGTCAGGGTCCCCGGCATTGGCCTGGTCTACACCGAGCTCGCCAGCGGTGTT CCTCACATCTTCTCGCACTTCATCACCAACCTCCCGGCGATCCACTCGACGCTGGTGTTC GTCTGCGTCAAGTACCTCCCGGTGTACACCGTGCCACCGGATGAGAGGTTCCTGGTGAAG CGGATCGGCCCCAAGAACTTCCACATGTTCCGGTGCGTGGCGCGGTACGGGTACAAGGAC ATCCACAAGAAGGATGACGACTTCGAGAAGATGTTGTTCGATAGCCTGATTCTGTTCGTG AGGCTGGAGAGCATGATGGAGGAGTACAGCGACTCCGACGAGTACAGCACCCTGATGATG AGCCTCCCAAATAACCCAGGGATCAGCAATGGCGGCGTGACCACCACCGGCACCAACAAT GTCATGGAGGTGATGAGCTGCACGTCGACCCATGACTCCATTGTGCCGGTGAACTCCAGG TCCGACGACACGGGCAGCAGCCAGGTGATGCCGGCGTCGGGGCAGATGGCGTTCCAGAGC GTCGGCGACGAGATCGCGTTCCTGAACGCGTGCAGGGACGCCGGGGTGGTGCACATCCTC GGGAACACGGTGATCAGAGCTCGCAGGGATTCAGGGTTCGTCAAGAAGATTGTCATCAAC TACATGTATGCTTTCCTGAGGAAGATCTGCAGGGAGAACAGTGCCATCTTCAATGTGCCT CATGAGAGCATGCTCAATGTTGGGCAGGTTTTCTACGTGTAA

Peptide Sequence

PEP ID	Os09t0563200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22367879:22373612:-1 gene:Os09g0563200 transcript:Os09t0563200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 18 description:Similar to Potassium transporter 11 (AtPOT11). (Os09t0563200-01)
Sequence	METRTNEYSRKGAMWELERNLDQPMDAEAGRLRNMYREKTYPTILLLRLAFQSLGVVFGD LGTSPLYVFYNIFPHGIEDTEQVIGALSLIIYSLTLIPLVKYVFIVLRANDNGQGGTFAL YSLLCRHAKINIIPNQHRTDQDLTTYSRRTYEEKSLAAKIQRWLEGHQFRKNLILILVLF GTCMAVGDGILTPAISVLSATGGIQVEEGRMRNDVVVIISVLILIGLFSMQHYGTDKVSW LFAPIVFVWFILIGILGAVNICKYDHSVLKAFNPVYVYRYFKRGKTSWTSLGGIMLSITG TEALFADLSYFPVQAIQIAFTVVVFPCLLLQYTGQAAFIAANTNQVSHAFYISLPAPILW PAFAVATAAAIVASQATISATYSIIKQALALGCFPRVKIIHTSKKYLGQIYSPDINWILM VFCIAVTAGFKNQSQIANAYGTAVIMVMLVTTFLMIPIMLLVWRSHWTLVVAFTVLSLLV EIPYFSAVVRKIDQGGWVPLVFAAGFMIIMYVWHYGTLKRYEFEMHSKVSMAWILGLGPS LGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSTLVFVCVKYLPVYTVPPDERFLVK RIGPKNFHMFRCVARYGYKDIHKKDDDFEKMLFDSLILFVRLESMMEEYSDSDEYSTLMM SLPNNPGISNGGVTTTGTNNVMEVMSCTSTHDSIVPVNSRSDDTGSSQVMPASGQMAFQS VGDEIAFLNACRDAGVVHILGNTVIRARRDSGFVKKIVINYMYAFLRKICRENSAIFNVP HESMLNVGQVFYV

Transcript Sequence

Transcript ID	Os09t0563200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22367879:22373612:-1 gene:Os09g0563200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 18 description:Similar to Potassium transporter 11 (AtPOT11). (Os09t0563200-01)
Sequence	ACCAAATGGTGCCAAATCTAGCAATTTCTCCCCACTCCACCCAGAAGAAAACCGTGAAGA AATTCTCCGGAGAGAAAAAATCCAATCTTTTCTCCCCCGAGCACACATCCCTGTCCGGAA TAATGCTCCCACGCGAATTCCTAACATCTCACCATCTCTTCCTCATATCCACAAGCCAGC GTATGGGTGATGTGTTCTTGATGATCCCCAAGGACGGACCTGTCCGGCGAATCTACAAAG TGGTGAGTAGGAAATTGTGGTAAAAAATCCCCCTTTTGCCGATGGTTTCGGAGGATTGCT GTTCTGGGGAGAAGTTTTGATCTCGCCGGCCTGTTTTGTGTGAGCCCGTGAAGCTTCGAA CCCCAGAGAATTTCTCGCCTCTTCGCATGCGGAGAGTTGCAAGCTTGTAAAAAACTACTG TTGATTGATCTGAAGTCTGAACCCATGGAGACCAGAACAAATGAGTATTCCCGTAAGGGG GCAATGTGGGAGCTGGAAAGGAATCTTGATCAACCCATGGATGCAGAGGCTGGAAGACTC AGGAATATGTACAGAGAAAAGACCTATCCAACAATTTTACTGCTACGGCTAGCTTTCCAA AGCCTTGGTGTGGTATTTGGAGACTTAGGCACATCACCTCTATATGTTTTCTACAATATC TTTCCTCATGGAATAGAAGATACAGAACAAGTTATTGGAGCACTCTCTCTTATAATTTAC TCCCTTACACTCATTCCACTTGTTAAATATGTTTTCATTGTCTTGAGAGCAAATGACAAT GGCCAAGGAGGAACATTTGCCCTTTATTCACTGCTTTGCCGTCATGCAAAGATAAATATT ATTCCAAATCAACATAGAACCGATCAAGATCTAACAACATACAGTCGCCGCACATATGAA GAAAAGTCTCTTGCTGCCAAAATCCAAAGATGGTTAGAGGGGCACCAATTCAGAAAGAAT TTAATTCTTATTCTTGTACTATTTGGAACTTGTATGGCTGTTGGAGATGGAATACTCACT CCTGCCATATCAGTTCTTTCTGCGACTGGTGGAATACAAGTTGAAGAAGGCAGAATGAGA AATGATGTGGTTGTAATTATCTCCGTGCTGATATTGATTGGACTGTTCAGCATGCAGCAC TATGGTACTGATAAAGTCAGCTGGCTCTTTGCACCAATAGTATTTGTTTGGTTCATACTC ATTGGGATTCTTGGTGCTGTAAACATTTGCAAATATGACCATTCAGTTCTTAAGGCTTTC AATCCTGTCTATGTATATCGTTACTTTAAACGAGGGAAGACTAGTTGGACTTCTTTAGGT GGAATTATGCTCAGCATAACAGGCACAGAAGCATTGTTTGCTGACCTTTCGTATTTTCCT GTACAAGCTATTCAGATTGCTTTCACTGTGGTTGTGTTCCCATGCCTTCTTCTGCAATAT ACTGGTCAGGCTGCGTTTATAGCTGCAAACACAAACCAAGTCAGCCATGCCTTCTATATC TCCCTTCCAGCTCCTATACTTTGGCCAGCATTTGCCGTTGCAACAGCAGCTGCAATAGTT GCTAGTCAGGCCACTATATCTGCAACATATTCGATTATCAAGCAAGCACTTGCCCTAGGG TGCTTTCCCCGAGTGAAGATCATCCATACTTCCAAGAAGTATCTCGGCCAGATATACAGC CCTGATATTAACTGGATCCTCATGGTTTTCTGCATAGCTGTCACTGCAGGGTTCAAAAAC CAATCCCAGATTGCAAATGCATATGGTACTGCTGTGATCATGGTTATGCTTGTGACAACA TTTCTGATGATCCCCATCATGCTGCTGGTGTGGCGAAGCCATTGGACCCTGGTCGTCGCC TTCACCGTGCTGTCATTGCTTGTGGAGATCCCCTACTTCTCGGCCGTCGTGCGCAAGATC GATCAGGGAGGATGGGTTCCGCTGGTTTTCGCGGCAGGCTTCATGATCATCATGTATGTC TGGCACTACGGCACCCTGAAGCGGTACGAGTTTGAGATGCACAGCAAGGTGTCCATGGCC TGGATCCTGGGGCTTGGTCCGAGCCTTGGCCTTGTCAGGGTCCCCGGCATTGGCCTGGTC TACACCGAGCTCGCCAGCGGTGTTCCTCACATCTTCTCGCACTTCATCACCAACCTCCCG GCGATCCACTCGACGCTGGTGTTCGTCTGCGTCAAGTACCTCCCGGTGTACACCGTGCCA CCGGATGAGAGGTTCCTGGTGAAGCGGATCGGCCCCAAGAACTTCCACATGTTCCGGTGC GTGGCGCGGTACGGGTACAAGGACATCCACAAGAAGGATGACGACTTCGAGAAGATGTTG TTCGATAGCCTGATTCTGTTCGTGAGGCTGGAGAGCATGATGGAGGAGTACAGCGACTCC GACGAGTACAGCACCCTGATGATGAGCCTCCCAAATAACCCAGGGATCAGCAATGGCGGC GTGACCACCACCGGCACCAACAATGTCATGGAGGTGATGAGCTGCACGTCGACCCATGAC TCCATTGTGCCGGTGAACTCCAGGTCCGACGACACGGGCAGCAGCCAGGTGATGCCGGCG TCGGGGCAGATGGCGTTCCAGAGCGTCGGCGACGAGATCGCGTTCCTGAACGCGTGCAGG GACGCCGGGGTGGTGCACATCCTCGGGAACACGGTGATCAGAGCTCGCAGGGATTCAGGG TTCGTCAAGAAGATTGTCATCAACTACATGTATGCTTTCCTGAGGAAGATCTGCAGGGAG AACAGTGCCATCTTCAATGTGCCTCATGAGAGCATGCTCAATGTTGGGCAGGTTTTCTAC GTGTAATGTAATCTTAGTAGCACTAGATTGTAAACTAAACATGCATGTGATTGTATCATT CAGACCGACTTG