Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0560400-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:22265601:22268858:-1 gene:Os09g0560400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0560400-01)
Sequence

ATGGCGAACAAGGCGCCGGCGACGACCTCGTGGCGGTGGCGGCTGCTGCTGCTGCTGCTC
CTCGCGGTGGCCGCCCTGTGCTGGATCCCTCCGGCGATCGCGATGGCCGCCGCGGCCGCC
GCCGCCACGACGTCCTCCGGGGGGCGGAGGTCGCTGCTCGGGTTCGTGGAGGCGCAGGGG
AACTCCTCCTACCGGTGCTCCCCATCCGGGCCCTGCGTCCCCTGCCAATACTCCGAGAAG
AGCGATGAGAAGTACTGTTGCAGTGAAACCGGCTACCGCTTGCCATTGAAATGTGTAGAA
GTACAAAATGTTACCAAAGAAGGAAATAATACTAAGCAACGGAAGGTGCTGGACGATGCA
TCCACGTCAGGTGGTTCAAAGCATTACACAACTTACAGGAGTTGTGTACCATTGGAGGAT
GAAGAGAAGTTATCTGTTCTTGGTTTTGAGGTTATGATGGCTGGAATGCTGCTAATAAGT
GGCCCATTTGTATACTATCGGAAAAGACGAACAGCTATAATGCAGGGGGCTTCAAGGATC
CCAACAAGCCCTCCTAGGTTTTAA

Peptide Sequence

PEP ID

Os09t0560400-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:22265601:22268858:-1 gene:Os09g0560400 transcript:Os09t0560400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0560400-01)
Sequence

MANKAPATTSWRWRLLLLLLLAVAALCWIPPAIAMAAAAAAATTSSGGRRSLLGFVEAQG
NSSYRCSPSGPCVPCQYSEKSDEKYCCSETGYRLPLKCVEVQNVTKEGNNTKQRKVLDDA
STSGGSKHYTTYRSCVPLEDEEKLSVLGFEVMMAGMLLISGPFVYYRKRRTAIMQGASRI
PTSPPRF

Transcript Sequence

Transcript ID

Os09t0560400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:22265601:22268858:-1 gene:Os09g0560400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0560400-01)
Sequence

GCGAAACCGCGGCGGAGGCAGCCATGGCGAACAAGGCGCCGGCGACGACCTCGTGGCGGT
GGCGGCTGCTGCTGCTGCTGCTCCTCGCGGTGGCCGCCCTGTGCTGGATCCCTCCGGCGA
TCGCGATGGCCGCCGCGGCCGCCGCCGCCACGACGTCCTCCGGGGGGCGGAGGTCGCTGC
TCGGGTTCGTGGAGGCGCAGGGGAACTCCTCCTACCGGTGCTCCCCATCCGGGCCCTGCG
TCCCCTGCCAATACTCCGAGAAGAGCGATGAGAAGTACTGTTGCAGTGAAACCGGCTACC
GCTTGCCATTGAAATGTGTAGAAGTACAAAATGTTACCAAAGAAGGAAATAATACTAAGC
AACGGAAGGTGCTGGACGATGCATCCACGTCAGGTGGTTCAAAGCATTACACAACTTACA
GGAGTTGTGTACCATTGGAGGATGAAGAGAAGTTATCTGTTCTTGGTTTTGAGGTTATGA
TGGCTGGAATGCTGCTAATAAGTGGCCCATTTGTATACTATCGGAAAAGACGAACAGCTA
TAATGCAGGGGGCTTCAAGGATCCCAACAAGCCCTCCTAGGTTTTAAGTATGCAATGATG
AATCGGCTGCTCAAGCTGATTTGGTGTACCATTTTGATGATTTTTCCCCCCTATCAATGT
ACTGTATTTACACGTGCTATTGTTGAAGAAGTCAAAGTGTTGGGTAGTTCTTACAGGATT
AGAAAAGCACAGTTGCTAGTCTCATTGTGCTTTGTTTTCTTGAATCAAATCTTTGTAATG
TTTATATGTAACAAATTACTTTCGATTTTGTTACCCCAATGAAGTTGCCCTGACAAAGGA
GACTCTGTTGTTGGCAATCAACTATTTGTCTCGCAGTGTTATCTGATTCACTGCAG