Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0560000-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22248966:22254215:-1 gene:Os09g0560000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os09t0560000-01)
Sequence	ATGAAGTCCAATGCGGTTACCTCCAAAGGCAAGGCCGTGTTCGAGCTGAAGCACAGGCTG GTCCAGGCCATCAACAAGATTGCAGACAGGGACACCTACCAGATTGGATTGGATGAGCTT GAGAAGGCCGCTGACACCTTGCCTCCTGACATGGTTGGTCCCTTCTTGTCTTGCGTGGTT GACACCGATGCCGAGCAGAAGAGTGCGGTGAGGAAGGAGTGCATCAAGGTGATTGGCACA TTGGCTCGGTCCCATGGAAGCCTAGTGGCACCTCACATGACGAAGATGGTGACCAGCATT GTCAAGCGCCTCAAGGATGCTGACTCTGTTGTGAGGGACGCCTGTGTTGATACCTGTGGT ACCCTCGCATTGTGTGCTAGAGGCTATGGGGATGGTGGCGCTGCATTGGTTGCGTTGGTG CGGCCCTTGTTTGAATCACTTGGTGAGCAGAATAGGTATGTTCAGGCTGGGGCAGCGTCT TGCTTGGCCAAGGTTATTGACGAGAGCAATTACTTCCCTGGCCCTGTTCTGCCGCAGATG CTTGTTCGTGTTGTTAAACTGCTCAAGAATCCCCATTTCATGGCAAAGCCTGCAGTGATT GAGTTGATCAGAAGTATTATTCAGGCTGAAGGTGCTTCTACAGAGCAGTCTTTAACATCT GCTCTAACAAGTATTATGGATGCCCTGAAGAGTAGTGATTGGACTACAAGGAAAGCAGCT TCAATAGCTCTATCTAGTATTGCTCTCAGTTCTGGATATCTGGTTGCCTCCTTTAGAACT TCCTGCCTTCGCTCCCTTGAACGTTCTAAATTTGACAAGGTCAAACCAGTGCGTGATGCA ATTACCCAAGCCATTCAGTTGTGGAAGGTTATTCCAGGGTCTGATACTCCCGAGCCATCA GAAGCTGGATCATCCACAAAAGAAAACTTCTTTGGTGACCATCATGATGGTAGAAGTATA AATGATGGTGGATCACGAGACACTTCTTTCAGGAGAGTTGATCCTGCATCTTCTGTTTCT GCAATCAGTGGCAATTCTATTACTTCATCAAAGAAGAGATCTCCTCTGTCTATCAATAAA ATAGCCCTGAATAATGCTGCAAATCAGCAACGCTCGAAGTTGAGCGATTGGCATGTTGAG ATATCTGTTCCTAAGCAGAATATGATACCATTAGTTGATTTTGAAGAAAAGGTGTCTGGC AATGGTTCCATGCTAAAGGGTTCAAATAGAAGTCCATATGAAATCGTAGACAATGACAGC AAGTATGAGTATGACCCCATGGATGATAAACAAGATTGCTCCTCTATGTCAGAAGTAGCC AGCAGGAGTTGTGAGACAAAGCATGTCACTTCTGCTCAGGAATGCGTTGAGGATTGTGAT TCTGCAAGAGACATTGAGCAATTCCCCAGGGCTCAAAAGAGTAAGAGCATAGACTCCACT GTTACAGATATCACTTCACATGGGACACATACTTGCTGTTTGGGTGCAATGAAAGAACTA TCTCATATCAGGAAGCAGCTTCAAGAGATGGAGAGGAAGCAAGCAAATATCTTTGATATG TTGCAGGAATTCATGTCTAACTCAGTGGAGAACATGTCAGTATTAAGCATGAAAGTGCAT AATTTGGAGAATGCTGTAGACAAAACTGTGTATACAATTACTCAAAGTGAAAGCCGCTAT CACCTTCCTGGTTCCAAGTTTATTAAGAACCAAAGTGCCACTTCTTCACCGAGGGTTTCT ACTTCTACACCTAGATCATCTGTGGATGCTAACTATAAGCCACCACCAATTCCTCATTTG AAACAAGAGAAAAAGTGGATGCAAGATCAACCATCAAAGGGCTTAAACATGGGTGTAAAA GAGGGGGAATTTCTAAAGAGTCATACTCATGACAAAACTAGAAAGCCTGGGGTTGTGAGA TCGGAAAGTGCTCTGGGAAGATATGTTCCAAGCTCAGCAAGGACTCGAGCATCAGGGGTT AAGGGAAACTTTCCAGTTTCACTTACCAATTCCTGTGAGCAGCCTGAGCTGCAAAATGCA TTGCGTGCTTCTAAAGAATTTGATGGTAATGATGACATGGCGTCTGCATATGTAGAAGCC CTGAACAGTGGTGACTGTGATTATCTGATTGACGTAATGGATAGAACTGGACCTGTTCTT GAGAAATTGTCACGTGAAACAACAAGTGAACTTTTGAGGGTTATAGCTGGCCAGTTTCTG AATAAAAAAATGTTTGATTTGGCATTGCCTTGGCTTCAACAGGTAGCGGATTTGAGCATG ATTTATAAGCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAGAAGGAGTTCCTTGCTTTA TTGGAGGAAGCTGCAACAAGTGGATCTACAGAGCCAGCAATCAGAATTGCCATTGCACAG CTTGCATTTAAACTGACAAAAGTCTGTGAGGTTGCACCATGCAGGAAAGTTTTGAGTAGA GTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGA

Peptide Sequence

PEP ID	Os09t0560000-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22248966:22254215:-1 gene:Os09g0560000 transcript:Os09t0560000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os09t0560000-01)
Sequence	MKSNAVTSKGKAVFELKHRLVQAINKIADRDTYQIGLDELEKAADTLPPDMVGPFLSCVV DTDAEQKSAVRKECIKVIGTLARSHGSLVAPHMTKMVTSIVKRLKDADSVVRDACVDTCG TLALCARGYGDGGAALVALVRPLFESLGEQNRYVQAGAASCLAKVIDESNYFPGPVLPQM LVRVVKLLKNPHFMAKPAVIELIRSIIQAEGASTEQSLTSALTSIMDALKSSDWTTRKAA SIALSSIALSSGYLVASFRTSCLRSLERSKFDKVKPVRDAITQAIQLWKVIPGSDTPEPS EAGSSTKENFFGDHHDGRSINDGGSRDTSFRRVDPASSVSAISGNSITSSKKRSPLSINK IALNNAANQQRSKLSDWHVEISVPKQNMIPLVDFEEKVSGNGSMLKGSNRSPYEIVDNDS KYEYDPMDDKQDCSSMSEVASRSCETKHVTSAQECVEDCDSARDIEQFPRAQKSKSIDST VTDITSHGTHTCCLGAMKELSHIRKQLQEMERKQANIFDMLQEFMSNSVENMSVLSMKVH NLENAVDKTVYTITQSESRYHLPGSKFIKNQSATSSPRVSTSTPRSSVDANYKPPPIPHL KQEKKWMQDQPSKGLNMGVKEGEFLKSHTHDKTRKPGVVRSESALGRYVPSSARTRASGV KGNFPVSLTNSCEQPELQNALRASKEFDGNDDMASAYVEALNSGDCDYLIDVMDRTGPVL EKLSRETTSELLRVIAGQFLNKKMFDLALPWLQQVADLSMIYKPSQLFVSVRAQKEFLAL LEEAATSGSTEPAIRIAIAQLAFKLTKVCEVAPCRKVLSRVCRGNETIMATAM

Transcript Sequence

Transcript ID	Os09t0560000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22248966:22254215:-1 gene:Os09g0560000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os09t0560000-01)
Sequence	ATAGGCGAGGCGAGGAGAGGAGGCGACGGCCGCGAGCGCGAGGCGAGGCTTCCGACTCGA GCAAGGAGATCCCACTGCTCCAACCAGATCAGGTGATGGGTGGGGAATCTACAGGAAACA CGACCTCCATTCCCCAATGGGAGAAGCCACTGTTCCCCTCAGTATCCATGTTACTCTGAG CTACTGAGCTCTCTGCTAAGTTGGTGCCTCAGCTGTGTATCTTGCAGCAAGAGTGTTCTA GCCTTCTAGGCTGCCAAGATGAAGTCCAATGCGGTTACCTCCAAAGGCAAGGCCGTGTTC GAGCTGAAGCACAGGCTGGTCCAGGCCATCAACAAGATTGCAGACAGGGACACCTACCAG ATTGGATTGGATGAGCTTGAGAAGGCCGCTGACACCTTGCCTCCTGACATGGTTGGTCCC TTCTTGTCTTGCGTGGTTGACACCGATGCCGAGCAGAAGAGTGCGGTGAGGAAGGAGTGC ATCAAGGTGATTGGCACATTGGCTCGGTCCCATGGAAGCCTAGTGGCACCTCACATGACG AAGATGGTGACCAGCATTGTCAAGCGCCTCAAGGATGCTGACTCTGTTGTGAGGGACGCC TGTGTTGATACCTGTGGTACCCTCGCATTGTGTGCTAGAGGCTATGGGGATGGTGGCGCT GCATTGGTTGCGTTGGTGCGGCCCTTGTTTGAATCACTTGGTGAGCAGAATAGGTATGTT CAGGCTGGGGCAGCGTCTTGCTTGGCCAAGGTTATTGACGAGAGCAATTACTTCCCTGGC CCTGTTCTGCCGCAGATGCTTGTTCGTGTTGTTAAACTGCTCAAGAATCCCCATTTCATG GCAAAGCCTGCAGTGATTGAGTTGATCAGAAGTATTATTCAGGCTGAAGGTGCTTCTACA GAGCAGTCTTTAACATCTGCTCTAACAAGTATTATGGATGCCCTGAAGAGTAGTGATTGG ACTACAAGGAAAGCAGCTTCAATAGCTCTATCTAGTATTGCTCTCAGTTCTGGATATCTG GTTGCCTCCTTTAGAACTTCCTGCCTTCGCTCCCTTGAACGTTCTAAATTTGACAAGGTC AAACCAGTGCGTGATGCAATTACCCAAGCCATTCAGTTGTGGAAGGTTATTCCAGGGTCT GATACTCCCGAGCCATCAGAAGCTGGATCATCCACAAAAGAAAACTTCTTTGGTGACCAT CATGATGGTAGAAGTATAAATGATGGTGGATCACGAGACACTTCTTTCAGGAGAGTTGAT CCTGCATCTTCTGTTTCTGCAATCAGTGGCAATTCTATTACTTCATCAAAGAAGAGATCT CCTCTGTCTATCAATAAAATAGCCCTGAATAATGCTGCAAATCAGCAACGCTCGAAGTTG AGCGATTGGCATGTTGAGATATCTGTTCCTAAGCAGAATATGATACCATTAGTTGATTTT GAAGAAAAGGTGTCTGGCAATGGTTCCATGCTAAAGGGTTCAAATAGAAGTCCATATGAA ATCGTAGACAATGACAGCAAGTATGAGTATGACCCCATGGATGATAAACAAGATTGCTCC TCTATGTCAGAAGTAGCCAGCAGGAGTTGTGAGACAAAGCATGTCACTTCTGCTCAGGAA TGCGTTGAGGATTGTGATTCTGCAAGAGACATTGAGCAATTCCCCAGGGCTCAAAAGAGT AAGAGCATAGACTCCACTGTTACAGATATCACTTCACATGGGACACATACTTGCTGTTTG GGTGCAATGAAAGAACTATCTCATATCAGGAAGCAGCTTCAAGAGATGGAGAGGAAGCAA GCAAATATCTTTGATATGTTGCAGGAATTCATGTCTAACTCAGTGGAGAACATGTCAGTA TTAAGCATGAAAGTGCATAATTTGGAGAATGCTGTAGACAAAACTGTGTATACAATTACT CAAAGTGAAAGCCGCTATCACCTTCCTGGTTCCAAGTTTATTAAGAACCAAAGTGCCACT TCTTCACCGAGGGTTTCTACTTCTACACCTAGATCATCTGTGGATGCTAACTATAAGCCA CCACCAATTCCTCATTTGAAACAAGAGAAAAAGTGGATGCAAGATCAACCATCAAAGGGC TTAAACATGGGTGTAAAAGAGGGGGAATTTCTAAAGAGTCATACTCATGACAAAACTAGA AAGCCTGGGGTTGTGAGATCGGAAAGTGCTCTGGGAAGATATGTTCCAAGCTCAGCAAGG ACTCGAGCATCAGGGGTTAAGGGAAACTTTCCAGTTTCACTTACCAATTCCTGTGAGCAG CCTGAGCTGCAAAATGCATTGCGTGCTTCTAAAGAATTTGATGGTAATGATGACATGGCG TCTGCATATGTAGAAGCCCTGAACAGTGGTGACTGTGATTATCTGATTGACGTAATGGAT AGAACTGGACCTGTTCTTGAGAAATTGTCACGTGAAACAACAAGTGAACTTTTGAGGGTT ATAGCTGGCCAGTTTCTGAATAAAAAAATGTTTGATTTGGCATTGCCTTGGCTTCAACAG GTAGCGGATTTGAGCATGATTTATAAGCCAAGTCAACTTTTTGTGTCTGTGAGAGCACAG AAGGAGTTCCTTGCTTTATTGGAGGAAGCTGCAACAAGTGGATCTACAGAGCCAGCAATC AGAATTGCCATTGCACAGCTTGCATTTAAACTGACAAAAGTCTGTGAGGTTGCACCATGC AGGAAAGTTTTGAGTAGAGTGTGCAGAGGAAATGAAACTATCATGGCCACTGCGATGTGA AATACTTCCCCTAGCAATGTACCCCCTAGTGTATGTTCAAACTTCAATGTCATGCTGCAG TGATTGAGTGCACCCATTTCATTTTGTTGTAGCCCTGTAATCTGTGTGACAATGTATACT CGGTTTGGGTACTATGTGCAAGACTAGATGAGTTCTGCAAATTCATCTATAGTTTGCTAG TTAAGCTTGGATCTTCTGTTGCTAGGAAACGGCTGTTTTTAGCTGTGTTGTGAGATTTGG TCTCATAAGTAGTGATCATTGAGCTTGTGAATTC