Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0558300-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:22193438:22197181:1 gene:Os09g0558300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 15 description:Similar to Cyclic nucleotide-gated channel A (Fragment). (Os09t0558300-01);Similar to cyclic nucleotide-gated ion channel 14. (Os09t0558300-02)
Sequence	CACCGCCGCATTCTAGACCCTGGGAGTAGCATGGTGCTAATGTGGAACAGGGTGTTCCTA GGGTCCTGTTTGTTTGCTCTTTTCATTGATCCTTTCTTCTACTACCTGCCGCTAGTTCAT GTACTAGATGAAAGTACCAACCGTTCATGCATTGCCAAGGACCGGCGATTGAGCATAACT ATCACTGTTCTTAGGACATTTGCGGACTTGTTTTACATGCTGAACATCATGGTCAAGTTC CATACTGCATATGTAGATCCAAAGTCCAGAGTACTTGGGAAGGGAGAGCTTGTCTTGGAC TTAAAGAAGATTCAACGGAGATATCTCAGAACAGATTTCTTTATTGACCTACTTGCAACG ATCCCTCTTCCTCAGGTTACCGTGTGGATTATTATGCCTTCAATAAAAAACTCAGATTAC AACATCCGGAACACCACATTTGCTCTGGTTATTATGATTCAGTATATATTCAGAATGTAT CTCATTGTACCATTAAGCAATCAAATTATCAAAGCAGCTGGAGTAGTTGCCAAGTCAGCC TGGCTAGGAGCAGCATACAATCTTCTGTACTACATGCTTGCAAGTCATATTACTGGAGCA ATATACTATCTTCTCTCCATTGAACGGCAAATTACATGTTGGAATCAGCAGTGCCTAAAT GAGTCTTGTAGTTTTAACTTCATAAGCTGTGACAATACTGGTTCTAGCAGTTATCTTACT TGGGGAAAGAACACAAGTATATTTGACAATTGTGATCCCAATCGTAATTCAAGTGCTAAC CCCCCACCATTTAATTATGGAATGTTTTCAACCGCACTGAGTAAAGGTGCTGTTTCTGCT CCATTTCTTGAGAAGTACTTCTTTTGTCTGTGGTGGGGCTTGCTGCAGCTTAGTTCTAGT GGAAATCCTCTTCAGACAAGTGCATACATCGCAGAGAACACATTTGCCATAGCAATTGGT GCTCTTAGTCTCGTACTCTTTGCTCAGCTGATTGGCAATATGCAGACATACTTGCAGTCC ATCAGTAAAAGGCTTGAAGAGTGGAGGCTCCGGCAAAGAGATATGGAGGAGTGGATGAGA CATCATCAGCTCCCTGATGAACTTCAAGATCGTGTCCGGCGATTCGTTCAGGTTAAATGG CTTGCAACACGAGGAGTAGAAGAGGAATCCATCTTACAAGCTTTGCCTGCTGATATACGC CGGGATGTACAGCGCCATCTTTGTTTGGACCTTGTTCGACGTGTCCCATTTTTCTCGGAG ATGGATTACCAACTTCTAGACGCCATCTGCGAGCGTCTGGTGTCTTTCCTGTGCCCTGAG CGCACATACATTTCTCGTGAGGGTGATCCTGTGAATGAGATGCTCTTCGTCATACGCGGT AAGCTAGAGAGCTCCACAACCAACGGAGGCCGCAGCAACTTCTTCAACTCCATCATCCTG CGCCCTGGTGATTTCGCTGGCGAGGAGCTGCTCACATGGGCTTTACTTCCAAAGACCAAT GTCCATTTCCCGCTTTCGACGAGGACAGTGCAGAGCCTTACAGAGGTTGAGGCCTTTGCC CTGAGAGCCGAGGACCTCAAGTTCGTCGCGAACCAGTTCAGAAGACTACACAGCAAGAAG CTCCAGCACACGTTCCGGTTCTACTCCCACCATTGGAGGACATGGGCTGCCTGCTTCATC CAGGCTGCTTGGCGGCAGCACCAGAGGAGAAAGCTGGCAGAGAGCCTGAGCCGGTGGGAA TCATACTCATGGTGGCCAGAAGAACATCCACCAGCTGACAAGCCTAAACAGGAGGGCACT TCAAGCAGTACCAAGACTATTGCTGAGAGTGCCATTGCTCAAATGCACAAGTTCGCCTCC GCTTCCAGAAGGTTCCGTGCCGACGATACCGCCATCCGGAGGCTGCAGAAGCCTGATGAG CCTGACTTCTCTGCAGATCATTTCGATTGA

Peptide Sequence

PEP ID	Os09t0558300-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:22193438:22197181:1 gene:Os09g0558300 transcript:Os09t0558300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 15 description:Similar to Cyclic nucleotide-gated channel A (Fragment). (Os09t0558300-01);Similar to cyclic nucleotide-gated ion channel 14. (Os09t0558300-02)
Sequence	HRRILDPGSSMVLMWNRVFLGSCLFALFIDPFFYYLPLVHVLDESTNRSCIAKDRRLSIT ITVLRTFADLFYMLNIMVKFHTAYVDPKSRVLGKGELVLDLKKIQRRYLRTDFFIDLLAT IPLPQVTVWIIMPSIKNSDYNIRNTTFALVIMIQYIFRMYLIVPLSNQIIKAAGVVAKSA WLGAAYNLLYYMLASHITGAIYYLLSIERQITCWNQQCLNESCSFNFISCDNTGSSSYLT WGKNTSIFDNCDPNRNSSANPPPFNYGMFSTALSKGAVSAPFLEKYFFCLWWGLLQLSSS GNPLQTSAYIAENTFAIAIGALSLVLFAQLIGNMQTYLQSISKRLEEWRLRQRDMEEWMR HHQLPDELQDRVRRFVQVKWLATRGVEEESILQALPADIRRDVQRHLCLDLVRRVPFFSE MDYQLLDAICERLVSFLCPERTYISREGDPVNEMLFVIRGKLESSTTNGGRSNFFNSIIL RPGDFAGEELLTWALLPKTNVHFPLSTRTVQSLTEVEAFALRAEDLKFVANQFRRLHSKK LQHTFRFYSHHWRTWAACFIQAAWRQHQRRKLAESLSRWESYSWWPEEHPPADKPKQEGT SSSTKTIAESAIAQMHKFASASRRFRADDTAIRRLQKPDEPDFSADHFD

Transcript Sequence

Transcript ID	Os09t0558300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22193438:22197181:1 gene:Os09g0558300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 15 description:Similar to Cyclic nucleotide-gated channel A (Fragment). (Os09t0558300-01);Similar to cyclic nucleotide-gated ion channel 14. (Os09t0558300-02)
Sequence	GGCACCGCCGCATTCTAGACCCTGGGAGTAGCATGGTGCTAATGTGGAACAGGGTGTTCC TAGGGTCCTGTTTGTTTGCTCTTTTCATTGATCCTTTCTTCTACTACCTGCCGCTAGTTC ATGTACTAGATGAAAGTACCAACCGTTCATGCATTGCCAAGGACCGGCGATTGAGCATAA CTATCACTGTTCTTAGGACATTTGCGGACTTGTTTTACATGCTGAACATCATGGTCAAGT TCCATACTGCATATGTAGATCCAAAGTCCAGAGTACTTGGGAAGGGAGAGCTTGTCTTGG ACTTAAAGAAGATTCAACGGAGATATCTCAGAACAGATTTCTTTATTGACCTACTTGCAA CGATCCCTCTTCCTCAGGTTACCGTGTGGATTATTATGCCTTCAATAAAAAACTCAGATT ACAACATCCGGAACACCACATTTGCTCTGGTTATTATGATTCAGTATATATTCAGAATGT ATCTCATTGTACCATTAAGCAATCAAATTATCAAAGCAGCTGGAGTAGTTGCCAAGTCAG CCTGGCTAGGAGCAGCATACAATCTTCTGTACTACATGCTTGCAAGTCATATTACTGGAG CAATATACTATCTTCTCTCCATTGAACGGCAAATTACATGTTGGAATCAGCAGTGCCTAA ATGAGTCTTGTAGTTTTAACTTCATAAGCTGTGACAATACTGGTTCTAGCAGTTATCTTA CTTGGGGAAAGAACACAAGTATATTTGACAATTGTGATCCCAATCGTAATTCAAGTGCTA ACCCCCCACCATTTAATTATGGAATGTTTTCAACCGCACTGAGTAAAGGTGCTGTTTCTG CTCCATTTCTTGAGAAGTACTTCTTTTGTCTGTGGTGGGGCTTGCTGCAGCTTAGTTCTA GTGGAAATCCTCTTCAGACAAGTGCATACATCGCAGAGAACACATTTGCCATAGCAATTG GTGCTCTTAGTCTCGTACTCTTTGCTCAGCTGATTGGCAATATGCAGACATACTTGCAGT CCATCAGTAAAAGGCTTGAAGAGTGGAGGCTCCGGCAAAGAGATATGGAGGAGTGGATGA GACATCATCAGCTCCCTGATGAACTTCAAGATCGTGTCCGGCGATTCGTTCAGGTTAAAT GGCTTGCAACACGAGGAGTAGAAGAGGAATCCATCTTACAAGCTTTGCCTGCTGATATAC GCCGGGATGTACAGCGCCATCTTTGTTTGGACCTTGTTCGACGTGTCCCATTTTTCTCGG AGATGGATTACCAACTTCTAGACGCCATCTGCGAGCGTCTGGTGTCTTTCCTGTGCCCTG AGCGCACATACATTTCTCGTGAGGGTGATCCTGTGAATGAGATGCTCTTCGTCATACGCG GTAAGCTAGAGAGCTCCACAACCAACGGAGGCCGCAGCAACTTCTTCAACTCCATCATCC TGCGCCCTGGTGATTTCGCTGGCGAGGAGCTGCTCACATGGGCTTTACTTCCAAAGACCA ATGTCCATTTCCCGCTTTCGACGAGGACAGTGCAGAGCCTTACAGAGGTTGAGGCCTTTG CCCTGAGAGCCGAGGACCTCAAGTTCGTCGCGAACCAGTTCAGAAGACTACACAGCAAGA AGCTCCAGCACACGTTCCGGTTCTACTCCCACCATTGGAGGACATGGGCTGCCTGCTTCA TCCAGGCTGCTTGGCGGCAGCACCAGAGGAGAAAGCTGGCAGAGAGCCTGAGCCGGTGGG AATCATACTCATGGTGGCCAGAAGAACATCCACCAGCTGACAAGCCTAAACAGGAGGGCA CTTCAAGCAGTACCAAGACTATTGCTGAGAGTGCCATTGCTCAAATGCACAAGTTCGCCT CCGCTTCCAGAAGGTTCCGTGCCGACGATACCGCCATCCGGAGGCTGCAGAAGCCTGATG AGCCTGACTTCTCTGCAGATCATTTCGATTGAGGCTGATGTTTCCTGCTTTAAAAAAACT GTTGTAAAACCACTACTGTGCACTGCATTGTATTCAATAGCCATATAGTAATCCATGTGT ATCTCAAAGATGAAACCAAACTGGTCCTTTGTGTAATTCAAATATACGCATTTTAGGAGC