Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0557500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22156928:22159600:-1 gene:Os09g0557500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURINE PERMEASE 5 description:Similar to ATPUP5. (Os09t0557500-01)
Sequence	ATGGAGAGGAACCAGCACCGCGACGGCGACGGCGACGGTGAGGGACGCCATCATCATGTC GTCCAGGTCCCAGCGTCAGCAGTAGAAGTTGCAGCAATGGAGGAGACCTCATCAGAGGCA GCAGATCGCTCTCTGCGTCAGAAGGCAGCAGCGATGGTTGCCTCCTCCATGGAGACGTAC CGGAGCAAGCCCATGTCCTTCTGGCTGCTGCTCGTCCTCAGCGCCGGCGCGATGCTCACA GCGTTCCCGGCGTCGAGCCTCCTGTCGCGGCTGTACTACAACAACGGCGGGCAGAGCAAG TGGATCCTGTCGTGGTCCGCCGTCGCCGGCTGGCCGCTGCCGGCGCTCCTCCTGCTGCCG TGCTACCTCGCCGGCAAGGCGGCGCCGACGCCGCTGTCGCCGAAGCTGTGCGCCTGGTAC GCGCTGCTCGGCCTCCTGAGCGCCGCCGACAACCTCATGTACGCCTGGGCCTACGCCTAC CTCCCGGCGTCCACGGCGTCGCTCGTCGCCGCGTCGTCGCTAGCGTTCTCGGCGCTGTTC GGCTGCGCCATCGCGAAGAACAGGCTGCGGCTGTCGTCGCTGAACGCCGTCGTCGTCATA ACCGCCGGCGTGGTGATCATCGCGCTGGACTCCGGGTCGGACAGGTACCCCGGGATCACG GGCAGGCAGTACGCGCTGGGGCTCGTCTGGGACGTGCTCGGGTCGGCGCTCCACGGCCTC ATCTTCGCGCTGTCGGAGCTGGTGTTCGTCCGGGTCCTCGGCCGGAGGTCGTTCCACGTC GTGCTGGAGCAGCAGGCGATGGTGTCGCTCTGCGCCTTCGCGTTCACCACCGTCGGGCTC GCCGTGAGCGGCGGCGGCTTCCCGGCGATGCGGCGGGAGGCGGCGGCGTTCAGGCACGGC GAGGCGTCGTACGCGATGGTGATGGTGTGGTCGGCGGTGACGTTCCAGCTCGGGGTGCTG GGGGGCACCGGCGTGCTGTTCCTGGCGTCGACCGTCCTCGCCGGCGTGCTCAACGCCGTG AGGGTGCCGGTGACGAGCATCGCGGCGGTGATCTGGTTCCATGACCCCATGAGCGGCTTC AAGATCCTGTCTCTGCTCATCACCGTATGGGGGTTCGGCTCCTACATGGTTGGCCACTCC TCTACCAAGAAAGCATCCACAAATTGA

Peptide Sequence

PEP ID	Os09t0557500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22156928:22159600:-1 gene:Os09g0557500 transcript:Os09t0557500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURINE PERMEASE 5 description:Similar to ATPUP5. (Os09t0557500-01)
Sequence	MERNQHRDGDGDGEGRHHHVVQVPASAVEVAAMEETSSEAADRSLRQKAAAMVASSMETY RSKPMSFWLLLVLSAGAMLTAFPASSLLSRLYYNNGGQSKWILSWSAVAGWPLPALLLLP CYLAGKAAPTPLSPKLCAWYALLGLLSAADNLMYAWAYAYLPASTASLVAASSLAFSALF GCAIAKNRLRLSSLNAVVVITAGVVIIALDSGSDRYPGITGRQYALGLVWDVLGSALHGL IFALSELVFVRVLGRRSFHVVLEQQAMVSLCAFAFTTVGLAVSGGGFPAMRREAAAFRHG EASYAMVMVWSAVTFQLGVLGGTGVLFLASTVLAGVLNAVRVPVTSIAAVIWFHDPMSGF KILSLLITVWGFGSYMVGHSSTKKASTN

Transcript Sequence

Transcript ID	Os09t0557500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22156928:22159600:-1 gene:Os09g0557500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURINE PERMEASE 5 description:Similar to ATPUP5. (Os09t0557500-01)
Sequence	GAGTGTAGCTTCCTCCCTAGCTGTCCGCGACTCCGCGACCGACGGCGGCGGCGGCAGATG GAGAGGAACCAGCACCGCGACGGCGACGGCGACGGTGAGGGACGCCATCATCATGTCGTC CAGGTCCCAGCGTCAGCAGTAGAAGTTGCAGCAATGGAGGAGACCTCATCAGAGGCAGCA GATCGCTCTCTGCGTCAGAAGGCAGCAGCGATGGTTGCCTCCTCCATGGAGACGTACCGG AGCAAGCCCATGTCCTTCTGGCTGCTGCTCGTCCTCAGCGCCGGCGCGATGCTCACAGCG TTCCCGGCGTCGAGCCTCCTGTCGCGGCTGTACTACAACAACGGCGGGCAGAGCAAGTGG ATCCTGTCGTGGTCCGCCGTCGCCGGCTGGCCGCTGCCGGCGCTCCTCCTGCTGCCGTGC TACCTCGCCGGCAAGGCGGCGCCGACGCCGCTGTCGCCGAAGCTGTGCGCCTGGTACGCG CTGCTCGGCCTCCTGAGCGCCGCCGACAACCTCATGTACGCCTGGGCCTACGCCTACCTC CCGGCGTCCACGGCGTCGCTCGTCGCCGCGTCGTCGCTAGCGTTCTCGGCGCTGTTCGGC TGCGCCATCGCGAAGAACAGGCTGCGGCTGTCGTCGCTGAACGCCGTCGTCGTCATAACC GCCGGCGTGGTGATCATCGCGCTGGACTCCGGGTCGGACAGGTACCCCGGGATCACGGGC AGGCAGTACGCGCTGGGGCTCGTCTGGGACGTGCTCGGGTCGGCGCTCCACGGCCTCATC TTCGCGCTGTCGGAGCTGGTGTTCGTCCGGGTCCTCGGCCGGAGGTCGTTCCACGTCGTG CTGGAGCAGCAGGCGATGGTGTCGCTCTGCGCCTTCGCGTTCACCACCGTCGGGCTCGCC GTGAGCGGCGGCGGCTTCCCGGCGATGCGGCGGGAGGCGGCGGCGTTCAGGCACGGCGAG GCGTCGTACGCGATGGTGATGGTGTGGTCGGCGGTGACGTTCCAGCTCGGGGTGCTGGGG GGCACCGGCGTGCTGTTCCTGGCGTCGACCGTCCTCGCCGGCGTGCTCAACGCCGTGAGG GTGCCGGTGACGAGCATCGCGGCGGTGATCTGGTTCCATGACCCCATGAGCGGCTTCAAG ATCCTGTCTCTGCTCATCACCGTATGGGGGTTCGGCTCCTACATGGTTGGCCACTCCTCT ACCAAGAAAGCATCCACAAATTGATGTACTCTTATTGTTCTTCTCCTGGAACATGAAAAA TATGTGAACTGAGTATGTTCTTGTATTGACC