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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0557400-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:22152690:22155609:-1 gene:Os09g0557400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial glycoprotein family protein. (Os09t0557400-01)
Sequence

ATGGCGCGCGCCCTAGTCCGCCGGGCTCTCTCCCTCGCCGCCGCGGCCTCCTCCCCGGCG
AAACCATCCTTCTCCACCGTCGTCGCGCCGCTGCGCTCCCCGATGGACGACCGCCTCCTC
CGCCTCCTGCGCTCCGAGATCAACTACATCTCCGAACGCCGCCCTCCCTACCCGCCGCCG
AAGGCCTTCAAATCGTTCGGGGTGGAGGACCGCCCGGGGGAGCAGTGGGTGCGCCTCCGC
GCCACCCGCGGCGCCCAGGACGAGGAGGTCAAGGTCGACGCCACCATGTTCGACGGCGCC
GCCGCCCCGCCCCCAGACGCGCCCCTCTTCCGCCGCGTCGAGTCGCTCGAGCGCGGCCCG
CGCCTCCACCTCAGCCTCATCGTCGAGGTCTCCCGGGCGGACCGCGTCCTCGGCTTCATC
TGCTCCGCCTGGCACGACGAACTCGTCGTCCGCCACGTCCTCACTCTCCGGGACGCCGAT
GGCTCCAGCACCAGCAGCGGAGGCCGCGACTTCGTCAAGCTGGAGGCTAGGGAGAGGGAG
TCGGTGAGGAAATTCTTGCAGGAGAGGGAGGTGGATGACGAGCTTGCCGAGTTCTTGCAC
GACTACATGGCGAACAAGGAAAAGATGGAGCTTCTCCGGTGGTTGAAGACTGTCGAATCA
TTCGTCGAGAAGTAG

Peptide Sequence

PEP ID

Os09t0557400-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:22152690:22155609:-1 gene:Os09g0557400 transcript:Os09t0557400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial glycoprotein family protein. (Os09t0557400-01)
Sequence

MARALVRRALSLAAAASSPAKPSFSTVVAPLRSPMDDRLLRLLRSEINYISERRPPYPPP
KAFKSFGVEDRPGEQWVRLRATRGAQDEEVKVDATMFDGAAAPPPDAPLFRRVESLERGP
RLHLSLIVEVSRADRVLGFICSAWHDELVVRHVLTLRDADGSSTSSGGRDFVKLEARERE
SVRKFLQEREVDDELAEFLHDYMANKEKMELLRWLKTVESFVEK

Transcript Sequence

Transcript ID

Os09t0557400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:22152690:22155609:-1 gene:Os09g0557400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial glycoprotein family protein. (Os09t0557400-01)
Sequence

AGACGCTTCGCAGAGGCAAAAGCTCGAACACATGGCGCGCGCCCTAGTCCGCCGGGCTCT
CTCCCTCGCCGCCGCGGCCTCCTCCCCGGCGAAACCATCCTTCTCCACCGTCGTCGCGCC
GCTGCGCTCCCCGATGGACGACCGCCTCCTCCGCCTCCTGCGCTCCGAGATCAACTACAT
CTCCGAACGCCGCCCTCCCTACCCGCCGCCGAAGGCCTTCAAATCGTTCGGGGTGGAGGA
CCGCCCGGGGGAGCAGTGGGTGCGCCTCCGCGCCACCCGCGGCGCCCAGGACGAGGAGGT
CAAGGTCGACGCCACCATGTTCGACGGCGCCGCCGCCCCGCCCCCAGACGCGCCCCTCTT
CCGCCGCGTCGAGTCGCTCGAGCGCGGCCCGCGCCTCCACCTCAGCCTCATCGTCGAGGT
CTCCCGGGCGGACCGCGTCCTCGGCTTCATCTGCTCCGCCTGGCACGACGAACTCGTCGT
CCGCCACGTCCTCACTCTCCGGGACGCCGATGGCTCCAGCACCAGCAGCGGAGGCCGCGA
CTTCGTCAAGCTGGAGGCTAGGGAGAGGGAGTCGGTGAGGAAATTCTTGCAGGAGAGGGA
GGTGGATGACGAGCTTGCCGAGTTCTTGCACGACTACATGGCGAACAAGGAAAAGATGGA
GCTTCTCCGGTGGTTGAAGACTGTCGAATCATTCGTCGAGAAGTAGGCACAGGAGAAGCA
GATAAATCAGGAGTTCCTTGCTGGTATCCGCATGACTCTGGACTTATTTCAAAGTTCAAA
CTATGGGAACTGAAAACAAATAGCGTCTGGGAAGTGATGATAAGAGCTGCTGTCCTACAC
ACCATGTAAATTATCCACCTCAGTGGTTCAATCCCATTGTTCGTGCTGTATGACTCTAGC
AATGAGCTGGGTTTTCAGCATATTCTGTGGTTCAATTCTAGTCACATTTGAGAAGATCAC
TAGGCACGCTCGTCTGATTATATTGGTGCTATGGAGCACTACCATTTGCTGTGGAATACA
GACAATTCTTATGCGGTTGGTTGTATGGCAATTGCTCGCCTATTCATTTTTATTTTAAAC
AATATAAGTAGATCTCC