Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0556500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22114202:22119961:-1 gene:Os09g0556500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteinyl-tRNA synthetase, class Ia family protein. (Os09t0556500-01)
Sequence	ATGGCGGCGGCGAGGCGCGCCGCTGGCCTCCTCCCTCTCCTCCTCTCCTCGCCGTCGCGA GCTCGCCTACCGCACCGCCAAGCGCTTGCCCTGACCCCTCCTCTGCTTCGCCCCCACCGC CTCTACTCCCACTCCCCCAAGCCCTCGTCGTCCGCCGCGTTTTCCGCCTTCGCCTCCGCC TCGAATGGCGCGCCTGCGGGGAGAGCCCGGGAGCTGCACCTCTACAACACCAAGTCGCGG AGGAAGGAGCTCTTCCAGCCCCGGGTGCCCGGCGGGGAGGTCGGCATGTACGTCTGCGGC GTCACCCCCTACGACGACAGCCACATCGGCCACGCCCGCGCCTACGTCGCCTTCGACGTC CTCTACAGGTACTTGCGTTATTTGGACCATAAAGTGCGCTATGTTCGGAATTTTACTGAC ATTGATGACAAGATAATTGCAAGAGCAAATCAATTGGGAGAAGATCCTTTTAGCTTAAGC AAAAGGTACTCTGATGACTTCCTATCAGACATGGCTAATCTTCATTGTTTACCACCATCT GTGGAGCCTCGCGTTTCAGACCACATTGATCAGATTATAAACATGATTAAACAGATCATT GATAATGATTGTGCATATGCAATTGGCGGGGATGTTTATTTCTCTGTTGAAAATTTCCCT GAATATGGGGATTTATCTGGTCGAAAATTAGATGATAATAGAGCTGGTGAAAGGGTTGCT GTTGATGAGAGGAAGAAGAACCCAGCTGATTTTGCTCTTTGGAAGGCTGCAAAAGATGGG GAGCCATCTTGGGATAGCCCTTGGGGCCCTGGAAGGCCAGGATGGCACATAGAATGCAGT GCTATGAGTGCACATTACTTGGGCCACTCTTTCGACATACATGGCGGTGGGGAGGACCTG ATCTTTCCACACCATGAAAATGAAATTGCTCAGAGCCGTGCAGCATGTTGTGACAGCAGC ATAAATTACTGGATACACAATGGCTTTGTCAATGTAAACAGCCAGAAAATGTCAAAATCG CTGGGCAACTTTGTCACTATACGCAAAGTTACGGAACTGTACCACCCACTTGCTTTGAGG ATGTTTTTACTTGGTACACACTACAGGTCCCCAATCAACTATACCATAGAACAGCTTAAT GTTGCATCAGACAGACTGTACTACACTTACCAGACACTACAAGATTGTGAAGAAAGTTGT CAACAGCACCAAAGCAAGGCTGGAGATCCATTACCTGTTAATACTACAAATTGTATCCAG AAGCTCCATGATGAATTTGAGACTTCAATGTCTGATGATCTTCACACTTCAGTAGCACTG GCTGCTATTTCTGAGCCATTAAAAGTTATGAATGACTTGCTGCATACTCGTAAGGGAAAG AAGCAGGAAAAACGGCTGGAATCACTTTCTGCTATGGAAGAGAAAATAAGGATGGTGCTT TCTGTCCTAGGGCTACTACCATCAAGCTATTATGAGGCTCTGCAGCAGCTGCGGGAAAAA GCACTAAGAAGAGCTTCCATGACAGAGGAGCAGGTGCTTCAGAAAATTGAAGAAAGGACT TCAGCAAGAAAGGCAAAACAGTATGAAAAATCCGATGAAATCAGAAAAGAATTGGCTGCT GTTGGAATTGCCCTCATGGACGGTCCTGACGGAACAACTTGGAGGCCATCTGTACCTCTT TCTGAGCAAGGGGTGGTTGCCAGTACATGA

Peptide Sequence

PEP ID	Os09t0556500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22114202:22119961:-1 gene:Os09g0556500 transcript:Os09t0556500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteinyl-tRNA synthetase, class Ia family protein. (Os09t0556500-01)
Sequence	MAAARRAAGLLPLLLSSPSRARLPHRQALALTPPLLRPHRLYSHSPKPSSSAAFSAFASA SNGAPAGRARELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDV LYRYLRYLDHKVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMANLHCLPPS VEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVA VDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDL IFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTELYHPLALR MFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDPLPVNTTNCIQ KLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLSAMEEKIRMVL SVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEIRKELAA VGIALMDGPDGTTWRPSVPLSEQGVVAST

Transcript Sequence

Transcript ID	Os09t0556500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22114202:22119961:-1 gene:Os09g0556500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteinyl-tRNA synthetase, class Ia family protein. (Os09t0556500-01)
Sequence	AAAGAGGGAAACGCTATCCGCTAACCCCTCGCGCCGTCGCGCTTCCTGTGCCTCGAGGAC CGACCATGGCGGCGGCGAGGCGCGCCGCTGGCCTCCTCCCTCTCCTCCTCTCCTCGCCGT CGCGAGCTCGCCTACCGCACCGCCAAGCGCTTGCCCTGACCCCTCCTCTGCTTCGCCCCC ACCGCCTCTACTCCCACTCCCCCAAGCCCTCGTCGTCCGCCGCGTTTTCCGCCTTCGCCT CCGCCTCGAATGGCGCGCCTGCGGGGAGAGCCCGGGAGCTGCACCTCTACAACACCAAGT CGCGGAGGAAGGAGCTCTTCCAGCCCCGGGTGCCCGGCGGGGAGGTCGGCATGTACGTCT GCGGCGTCACCCCCTACGACGACAGCCACATCGGCCACGCCCGCGCCTACGTCGCCTTCG ACGTCCTCTACAGGTACTTGCGTTATTTGGACCATAAAGTGCGCTATGTTCGGAATTTTA CTGACATTGATGACAAGATAATTGCAAGAGCAAATCAATTGGGAGAAGATCCTTTTAGCT TAAGCAAAAGGTACTCTGATGACTTCCTATCAGACATGGCTAATCTTCATTGTTTACCAC CATCTGTGGAGCCTCGCGTTTCAGACCACATTGATCAGATTATAAACATGATTAAACAGA TCATTGATAATGATTGTGCATATGCAATTGGCGGGGATGTTTATTTCTCTGTTGAAAATT TCCCTGAATATGGGGATTTATCTGGTCGAAAATTAGATGATAATAGAGCTGGTGAAAGGG TTGCTGTTGATGAGAGGAAGAAGAACCCAGCTGATTTTGCTCTTTGGAAGGCTGCAAAAG ATGGGGAGCCATCTTGGGATAGCCCTTGGGGCCCTGGAAGGCCAGGATGGCACATAGAAT GCAGTGCTATGAGTGCACATTACTTGGGCCACTCTTTCGACATACATGGCGGTGGGGAGG ACCTGATCTTTCCACACCATGAAAATGAAATTGCTCAGAGCCGTGCAGCATGTTGTGACA GCAGCATAAATTACTGGATACACAATGGCTTTGTCAATGTAAACAGCCAGAAAATGTCAA AATCGCTGGGCAACTTTGTCACTATACGCAAAGTTACGGAACTGTACCACCCACTTGCTT TGAGGATGTTTTTACTTGGTACACACTACAGGTCCCCAATCAACTATACCATAGAACAGC TTAATGTTGCATCAGACAGACTGTACTACACTTACCAGACACTACAAGATTGTGAAGAAA GTTGTCAACAGCACCAAAGCAAGGCTGGAGATCCATTACCTGTTAATACTACAAATTGTA TCCAGAAGCTCCATGATGAATTTGAGACTTCAATGTCTGATGATCTTCACACTTCAGTAG CACTGGCTGCTATTTCTGAGCCATTAAAAGTTATGAATGACTTGCTGCATACTCGTAAGG GAAAGAAGCAGGAAAAACGGCTGGAATCACTTTCTGCTATGGAAGAGAAAATAAGGATGG TGCTTTCTGTCCTAGGGCTACTACCATCAAGCTATTATGAGGCTCTGCAGCAGCTGCGGG AAAAAGCACTAAGAAGAGCTTCCATGACAGAGGAGCAGGTGCTTCAGAAAATTGAAGAAA GGACTTCAGCAAGAAAGGCAAAACAGTATGAAAAATCCGATGAAATCAGAAAAGAATTGG CTGCTGTTGGAATTGCCCTCATGGACGGTCCTGACGGAACAACTTGGAGGCCATCTGTAC CTCTTTCTGAGCAAGGGGTGGTTGCCAGTACATGATCTGCGCAACAAAAGCTCCGGAGTG ACCATTTCAAATACCCATCACCACATGATCCATTCATGAGGAACTGCGATGTTTTCCAGG TTTTGAGAGAAAATCAAGAGAACATCTGACGAATCAGATGGCCTGCATGATTCGGTAGAG TGGATATGAGTTTCTGTCTGACAGAAGATAGCCAAGTTTTACAGTTTTATTACATCATAC ATATTTTGTTCTCGAGTCAGCTGATATGGTGCAACATTTTGCCTATTTTTTTACCTGCAG AGTTTACTGCGCGATACTTTTTAGAAACATCAGTACAAAATATTGTGTGCTGATTCATTT TTTGAATGATAATACGGTTTGGCATTTCAAATGGAAGTAAAGCAAATGTATAAGCTATTC GGAGCAAAATGTTTTCACCATCATTTTTC