Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0556000-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:22092230:22095269:-1 gene:Os09g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal peptidase 22 kDa subunit family protein. (Os09t0556000-01)
Sequence

ATGCATTCGTTCGGGCACCGCGCCAACGCGGTGGCGACGTTCGCGGTGACCATCCTGGCC
GCCATGTGCTTCGCCGCCTCCTTCTCCGACCACTTCAACTCCCCTTCCCCCACCGCCTCT
GTCAAGATCTTGAACATAAACTGGTTTCAGAAGGAAGCCAACGGCAACGACGAGGTCAGC
ATGACGCTGAACATTTCGGCTGACCTCTCGTCTCTGTTCACGTGGAACACAAAACAGGTC
TTTGTTTTTGTCGCAGCTGAATATGAGACTCCACAAAATGCCTTGAATCAAGTTTCCCTC
TGGGATGGCATTATACCATCAAAAGAGCACGCCAAGTTTTTGATCCATACAACAAACAAG
TACAGATTTATTGACCAGGGAAGCAACCTCAAAGGAAAGGATTTTAACCTGACAATGCAC
TGGCATATTATGCCAAAGACCGGCAAGATGTTTGCAGACAAGATAGTCATGACAGGTTAT
CGGCTACCTGAACAGTACAGATAG

Peptide Sequence

PEP ID

Os09t0556000-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:22092230:22095269:-1 gene:Os09g0556000 transcript:Os09t0556000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal peptidase 22 kDa subunit family protein. (Os09t0556000-01)
Sequence

MHSFGHRANAVATFAVTILAAMCFAASFSDHFNSPSPTASVKILNINWFQKEANGNDEVS
MTLNISADLSSLFTWNTKQVFVFVAAEYETPQNALNQVSLWDGIIPSKEHAKFLIHTTNK
YRFIDQGSNLKGKDFNLTMHWHIMPKTGKMFADKIVMTGYRLPEQYR

Transcript Sequence

Transcript ID

Os09t0556000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:22092230:22095269:-1 gene:Os09g0556000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal peptidase 22 kDa subunit family protein. (Os09t0556000-01)
Sequence

GAGAGAGAGAGAGAGAGAGGGAGGAGAGCTGAACTGAAGTCGCCGGCGCCGCCGCGGAGA
AGCGAAGCCCGGCGATCTACCCGACCGTGGAGAGGGAGCAGCTCGTCGGGGAGGAGAGGG
GGAGGATGCATTCGTTCGGGCACCGCGCCAACGCGGTGGCGACGTTCGCGGTGACCATCC
TGGCCGCCATGTGCTTCGCCGCCTCCTTCTCCGACCACTTCAACTCCCCTTCCCCCACCG
CCTCTGTCAAGATCTTGAACATAAACTGGTTTCAGAAGGAAGCCAACGGCAACGACGAGG
TCAGCATGACGCTGAACATTTCGGCTGACCTCTCGTCTCTGTTCACGTGGAACACAAAAC
AGGTCTTTGTTTTTGTCGCAGCTGAATATGAGACTCCACAAAATGCCTTGAATCAAGTTT
CCCTCTGGGATGGCATTATACCATCAAAAGAGCACGCCAAGTTTTTGATCCATACAACAA
ACAAGTACAGATTTATTGACCAGGGAAGCAACCTCAAAGGAAAGGATTTTAACCTGACAA
TGCACTGGCATATTATGCCAAAGACCGGCAAGATGTTTGCAGACAAGATAGTCATGACAG
GTTATCGGCTACCTGAACAGTACAGATAGAAGAACCTGAGTTAGCTCAATGGATGCTTTG
CTATACAAATGCAGTGGTTATTGCGGGGAGCAGACATTGCCTATGCTAAGTTTTTTGTTC
TAATCGTAGCAAAACATGTAATCTTTTGTGCTTGTGTTCTAACTGAAACCAGGCGATACA
TATGTTGTTTGACTCGTCATCCAGAAGTTGAGAAAGATGTAACAGTGTAGTGCCCTTTTG
ATCGAGAACCCAGGCGTTGCAAACTTGCAATCACGTTAATTTCAATGTTTATGTAGCAAA
TCCTAGTATTTGCAGAGTCGACGTTTGAAGG