Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0555700-03
CDS Infomation	cds chromosome:IRGSP-1.0:9:22064455:22069942:-1 gene:Os09g0555700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 3 description:Zinc finger, C2H2-type domain containing protein. (Os09t0555700-01);Zinc finger, C2H2-type domain containing protein. (Os09t0555700-02);Zinc finger, C2H2-type domain containing protein. (Os09t0555700-03)
Sequence	ATGGCGGCCGCCTCGTCCGCACCCTTCTTTGGGCTCGGCGACACGCAGATGCCGCCGCCG CAGAATCCCACCAATCCAGCCCTCCACCACCACCCCAACCCCTCCCCCGCTCCCGTCGCC GCCGCCGCGCCCGCGCCGAAGAAGAAGAGGAACCAGCCTGGAAACCCAAATCCAGATGCG GAGGTGATAGCGCTGTCGCCGCGGACGCTGATGGCGACCAACAGGTTCGTGTGCGAGGTG TGCAACAAGGGGTTCCAGCGGGAGCAGAACCTGCAGCTGCACCGGCGAGGGCACAACCTG CCGTGGAAGCTGAAGCAGAAGAACCCCAAGGAGGCTCGCCGGCGCGTGTACCTGTGCCCG GAGCCGTCGTGCGTCCACCACGACCCGTCGCGGGCCCTCGGCGACCTCACCGGGATCAAG AAGCACTACTGCCGCAAGCACGGCGAGAAGAAGTGGCGCTGCGACAAGTGCTCCAAGCGC TACGCCGTGCAGTCCGACTGGAAGGCCCACTCCAAGACCTGCGGCACCCGCGAGTACCGC TGCGACTGCGGCACCCTCTTCTCCAGGAGGGACAGCTTCATCACCCACCGCGCCTTCTGC GACGCGCTGGCGCAGGAGAACGCGCGCATGCCGCCCATCGGCGCCGGCGTATACGGCGGC GCCGGCAACATGACACTTGGGCTCACCGGCATGGCCGCCCCGCAACTTCCCGCCGGCTTC CCTGATCAGGCCGGCCAGCCGTCGGCGTCGGCCGGCGATGTCCTCCGCCTCGGCGGCGGC AGCAATGGCGCCTCTCAGTTTGATCACCTCATGGCCTCGTCGTCGGGCTCCTCCATGTTC CGCTCGCAGGGATCGTCGTCCTCCTCGTTCTACCTCGCCAATGGCGCCGCCCATCATGCT CCCGCTCAGGACTTCGGCCCGGAGGACGGCCAGTCTCAGGCCGGCCAGGGCTCGCTGCTC CACGGCAAGCCGGCGGCGTTCCATGACCTGATGCAGCTCCCCGTGCAGCACCAGCAAAGC GGCAATGGTAACCTCCTCAACCTTGGCTTCTTCTCCGGCAGCAATGGCGGCGTCGACCAG TTCAACGGCGGCGCTGGAAACGGCGGGCAGGGCAGCATCGTTACTTCTAGCGGCCTCGCC GGCAACCACGGCGGCGGCGGCGGCGGCTTCCCTTCTCTGTACAACTCGTCCGAACCGGCC GGTACACTGCCGCAGATGTCGGCGACGGCGCTCTTGCAGAAGGCTGCCCAGATGGGTGCA ACGACGAGCAGCTACAACGCCGGCGGCGCCGGTGGCGCGAGCTCGCTGCTCCGTGGAGCT AGCTCCCACGGGATCAGCGTCGGTGAAGGGCCGGCCAACGAGAGGTCGTCGTACCAGAAT CTCATCATGGGCTCCATGGCGAGCGGCGGCGGTGGCGCGGGTTTCGCCGGTAGCTTCTCC GGCGCGTCTGGATTCGGTGGCGCCGTCGACGACGGCAAGCTGAGCACGAGGGACTTCCTC GGCGTCGGCGTCGTCCAGGGCATCAGCGGCTCGGCGGCAATGGGGCCGCCGCGCCATGGC GCGGCCGGCCTCCACGTCGGCTCACTGGACCCGGCAAACATGAACTGA

Peptide Sequence

PEP ID	Os09t0555700-03
PEP Infomation	pep chromosome:IRGSP-1.0:9:22064455:22069942:-1 gene:Os09g0555700 transcript:Os09t0555700-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 3 description:Zinc finger, C2H2-type domain containing protein. (Os09t0555700-01);Zinc finger, C2H2-type domain containing protein. (Os09t0555700-02);Zinc finger, C2H2-type domain containing protein. (Os09t0555700-03)
Sequence	MAAASSAPFFGLGDTQMPPPQNPTNPALHHHPNPSPAPVAAAAPAPKKKRNQPGNPNPDA EVIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCP EPSCVHHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKTCGTREYR CDCGTLFSRRDSFITHRAFCDALAQENARMPPIGAGVYGGAGNMTLGLTGMAAPQLPAGF PDQAGQPSASAGDVLRLGGGSNGASQFDHLMASSSGSSMFRSQGSSSSSFYLANGAAHHA PAQDFGPEDGQSQAGQGSLLHGKPAAFHDLMQLPVQHQQSGNGNLLNLGFFSGSNGGVDQ FNGGAGNGGQGSIVTSSGLAGNHGGGGGGFPSLYNSSEPAGTLPQMSATALLQKAAQMGA TTSSYNAGGAGGASSLLRGASSHGISVGEGPANERSSYQNLIMGSMASGGGGAGFAGSFS GASGFGGAVDDGKLSTRDFLGVGVVQGISGSAAMGPPRHGAAGLHVGSLDPANMN

Transcript Sequence

Transcript ID	Os09t0555700-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22064455:22069942:-1 gene:Os09g0555700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 3 description:Zinc finger, C2H2-type domain containing protein. (Os09t0555700-01);Zinc finger, C2H2-type domain containing protein. (Os09t0555700-02);Zinc finger, C2H2-type domain containing protein. (Os09t0555700-03)
Sequence	GATCTCTCCCTGTTGTTTTGCGGGGATGGCGGCCGCCTCGTCCGCACCCTTCTTTGGGCT CGGCGACACGCAGATGCCGCCGCCGCAGAATCCCACCAATCCAGCCCTCCACCACCACCC CAACCCCTCCCCCGCTCCCGTCGCCGCCGCCGCGCCCGCGCCGAAGAAGAAGAGGAACCA GCCTGGAAACCCAAATCCAGATGCGGAGGTGATAGCGCTGTCGCCGCGGACGCTGATGGC GACCAACAGGTTCGTGTGCGAGGTGTGCAACAAGGGGTTCCAGCGGGAGCAGAACCTGCA GCTGCACCGGCGAGGGCACAACCTGCCGTGGAAGCTGAAGCAGAAGAACCCCAAGGAGGC TCGCCGGCGCGTGTACCTGTGCCCGGAGCCGTCGTGCGTCCACCACGACCCGTCGCGGGC CCTCGGCGACCTCACCGGGATCAAGAAGCACTACTGCCGCAAGCACGGCGAGAAGAAGTG GCGCTGCGACAAGTGCTCCAAGCGCTACGCCGTGCAGTCCGACTGGAAGGCCCACTCCAA GACCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCAGGAGGGACAG CTTCATCACCCACCGCGCCTTCTGCGACGCGCTGGCGCAGGAGAACGCGCGCATGCCGCC CATCGGCGCCGGCGTATACGGCGGCGCCGGCAACATGACACTTGGGCTCACCGGCATGGC CGCCCCGCAACTTCCCGCCGGCTTCCCTGATCAGGCCGGCCAGCCGTCGGCGTCGGCCGG CGATGTCCTCCGCCTCGGCGGCGGCAGCAATGGCGCCTCTCAGTTTGATCACCTCATGGC CTCGTCGTCGGGCTCCTCCATGTTCCGCTCGCAGGGATCGTCGTCCTCCTCGTTCTACCT CGCCAATGGCGCCGCCCATCATGCTCCCGCTCAGGACTTCGGCCCGGAGGACGGCCAGTC TCAGGCCGGCCAGGGCTCGCTGCTCCACGGCAAGCCGGCGGCGTTCCATGACCTGATGCA GCTCCCCGTGCAGCACCAGCAAAGCGGCAATGGTAACCTCCTCAACCTTGGCTTCTTCTC CGGCAGCAATGGCGGCGTCGACCAGTTCAACGGCGGCGCTGGAAACGGCGGGCAGGGCAG CATCGTTACTTCTAGCGGCCTCGCCGGCAACCACGGCGGCGGCGGCGGCGGCTTCCCTTC TCTGTACAACTCGTCCGAACCGGCCGGTACACTGCCGCAGATGTCGGCGACGGCGCTCTT GCAGAAGGCTGCCCAGATGGGTGCAACGACGAGCAGCTACAACGCCGGCGGCGCCGGTGG CGCGAGCTCGCTGCTCCGTGGAGCTAGCTCCCACGGGATCAGCGTCGGTGAAGGGCCGGC CAACGAGAGGTCGTCGTACCAGAATCTCATCATGGGCTCCATGGCGAGCGGCGGCGGTGG CGCGGGTTTCGCCGGTAGCTTCTCCGGCGCGTCTGGATTCGGTGGCGCCGTCGACGACGG CAAGCTGAGCACGAGGGACTTCCTCGGCGTCGGCGTCGTCCAGGGCATCAGCGGCTCGGC GGCAATGGGGCCGCCGCGCCATGGCGCGGCCGGCCTCCACGTCGGCTCACTGGACCCGGC AAACATGAACTGAAGTCATCACAGAGAAGAAAAAAAACAATAGAAGACGGAAGGAGATGA TCATGCTGCTAATTTCATTTCATCATATCAGAATTAGTCAAGAAACTGGAGGTAATTAAT TAAGAAGAGAAAAGCGATTTCAATCCATGCAAGATGGATGTTTCTGGGGAAATCTGGAGC TGTTAATGGTGAGTCGTAGTTGCTAGCTAGCTAGCCAGAGCTGGGAGGAATAATAATAAT ACCTGGATTAAGTGGCCAGAACTTAATTTTGTACCGGTACATTTCGTTTGTTTTTCATGT ACTTTTGGCAGGGAAATGGGTCTCTTTTGATGTGAAGTCATCATGTGAAGGCCTGACCCC AGACTAGAATCAATTCAAGCGCGCGCTGTGCCTGGATTAATTAATCTTGGAGTTTTATTG C