Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0555500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:22042098:22045048:-1 gene:Os09g0555500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phytoene synthase 3 description:Similar to Chloroplast phytoene synthase 3. (Os09t0555500-01)
Sequence	GCGAAGATGGCGCCGCCGCCGCCGCCGCCGTGCTCCGTGCGCGCCGCGGGCTCCAATCCA ATTGGCTGCCTCGAGGTAGCAGAGCCGTGGAGCGGCGCCGCGCCGCCCCCGCTGCCGCCG CTGCCGGGCCATCTGCATGTCGCGGCGCCGGCGGCGGAGGACGACGACGACGCGCTCGCC GCCGCCGCCGCCGCCGTGCCGTCCGAGCAGAGGGTGCACGACGTCGTTCTGAAGCAAGCG GCGCTCGCCGCGGCAGCGCCCGAGATGCGGAGGCCGGCGCAGTTGGCCGAGAGGGAGCGC GTCGCCGGCGGCCTGAACGCCGCCTTCGATCGCTGCGGCGAGGTCTGCAAGGAGTACGCC AAGACATTCTACCTCGCGACGCAGCTGATGACGCCGGAGAGGAGGAGGGCAATCTGGGCG ATATACGTGTGGTGCAGGCGAACGGACGAGCTGGTGGATGGGCCCAACGCGTCGCACATG TCGGCGCTGGCTCTCGACCGGTGGGAGTCGCGGCTGGACGACATCTTCGCCGGCCGCCCC TACGACATGCTCGACGCCGCCCTCTCCCACACCGTCGCCACCTTCCCCGTCGACATCCAG CCGTTCAGGGACATGATCGAGGGGATGCGATTGGACCTAACGAAGTCGAGGTACAGGAGC TTCGACGAGCTCTACCTCTACTGCTACTACGTCGCCGGAACGGTCGGGCTCATGACGGTG CCGGTCATGGGCATCTCGCCGGACTCGAGGGCCAACACCGAGACCGTCTACAAGGGGGCA CTGGCTCTCGGCCTCGCCAACCAGCTCACCAACATTCTCAGGGACGTCGGCGAGGATGCA AGAAGAGGCAGGATCTATCTCCCAATGGACGAGCTCGAGATGGCCGGACTCTCTGAAGAT GACATCTTCGACGGCCGCGTCACGGACAGATGGAGATGTTTTATGAGGGATCAGATCACG AGAGCGAGGGCGTTTTTCAGACAGGCCGAAGAAGGCGCCAGCGAGCTCAATCAGGAGAGC CGATGGCCGGTTTGGGCTTCTCTACTTCTGTACCGACAAATCCTTGACGAGATCGAGGCC AACGATTACAACAACTTCACCAAGAGGGCCTACGTCCCAAAGGCAAAGAAGATTGTGGCT CTGCCTAAAGCTTACTACAGATCACTCATGCTCCCCTCTTCAGTGAGGCACTGCTCTAGC CTAACATCATCATGA

Peptide Sequence

PEP ID	Os09t0555500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:22042098:22045048:-1 gene:Os09g0555500 transcript:Os09t0555500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phytoene synthase 3 description:Similar to Chloroplast phytoene synthase 3. (Os09t0555500-01)
Sequence	AKMAPPPPPPCSVRAAGSNPIGCLEVAEPWSGAAPPPLPPLPGHLHVAAPAAEDDDDALA AAAAAVPSEQRVHDVVLKQAALAAAAPEMRRPAQLAERERVAGGLNAAFDRCGEVCKEYA KTFYLATQLMTPERRRAIWAIYVWCRRTDELVDGPNASHMSALALDRWESRLDDIFAGRP YDMLDAALSHTVATFPVDIQPFRDMIEGMRLDLTKSRYRSFDELYLYCYYVAGTVGLMTV PVMGISPDSRANTETVYKGALALGLANQLTNILRDVGEDARRGRIYLPMDELEMAGLSED DIFDGRVTDRWRCFMRDQITRARAFFRQAEEGASELNQESRWPVWASLLLYRQILDEIEA NDYNNFTKRAYVPKAKKIVALPKAYYRSLMLPSSVRHCSSLTSS

Transcript Sequence

Transcript ID	Os09t0555500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:22042098:22045048:-1 gene:Os09g0555500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phytoene synthase 3 description:Similar to Chloroplast phytoene synthase 3. (Os09t0555500-01)
Sequence	CGCGAAGATGGCGCCGCCGCCGCCGCCGCCGTGCTCCGTGCGCGCCGCGGGCTCCAATCC AATTGGCTGCCTCGAGGTAGCAGAGCCGTGGAGCGGCGCCGCGCCGCCCCCGCTGCCGCC GCTGCCGGGCCATCTGCATGTCGCGGCGCCGGCGGCGGAGGACGACGACGACGCGCTCGC CGCCGCCGCCGCCGCCGTGCCGTCCGAGCAGAGGGTGCACGACGTCGTTCTGAAGCAAGC GGCGCTCGCCGCGGCAGCGCCCGAGATGCGGAGGCCGGCGCAGTTGGCCGAGAGGGAGCG CGTCGCCGGCGGCCTGAACGCCGCCTTCGATCGCTGCGGCGAGGTCTGCAAGGAGTACGC CAAGACATTCTACCTCGCGACGCAGCTGATGACGCCGGAGAGGAGGAGGGCAATCTGGGC GATATACGTGTGGTGCAGGCGAACGGACGAGCTGGTGGATGGGCCCAACGCGTCGCACAT GTCGGCGCTGGCTCTCGACCGGTGGGAGTCGCGGCTGGACGACATCTTCGCCGGCCGCCC CTACGACATGCTCGACGCCGCCCTCTCCCACACCGTCGCCACCTTCCCCGTCGACATCCA GCCGTTCAGGGACATGATCGAGGGGATGCGATTGGACCTAACGAAGTCGAGGTACAGGAG CTTCGACGAGCTCTACCTCTACTGCTACTACGTCGCCGGAACGGTCGGGCTCATGACGGT GCCGGTCATGGGCATCTCGCCGGACTCGAGGGCCAACACCGAGACCGTCTACAAGGGGGC ACTGGCTCTCGGCCTCGCCAACCAGCTCACCAACATTCTCAGGGACGTCGGCGAGGATGC AAGAAGAGGCAGGATCTATCTCCCAATGGACGAGCTCGAGATGGCCGGACTCTCTGAAGA TGACATCTTCGACGGCCGCGTCACGGACAGATGGAGATGTTTTATGAGGGATCAGATCAC GAGAGCGAGGGCGTTTTTCAGACAGGCCGAAGAAGGCGCCAGCGAGCTCAATCAGGAGAG CCGATGGCCGGTTTGGGCTTCTCTACTTCTGTACCGACAAATCCTTGACGAGATCGAGGC CAACGATTACAACAACTTCACCAAGAGGGCCTACGTCCCAAAGGCAAAGAAGATTGTGGC TCTGCCTAAAGCTTACTACAGATCACTCATGCTCCCCTCTTCAGTGAGGCACTGCTCTAG CCTAACATCATCATGATCAGCTTGTGGTATTGTTGTTACAATTTATCTTGTATTCAAGTC TTGCAATGTACAAAGTATTGCAGTATCTGCAAATATATGTACACTTTAACATTGTGTATA TATAGGGAAGTTTCTATGAAACAGAGTAGTGTATATATGACCATATTTCATAGGTCATAC TACTCTTGCATAATGCTGTCAGCTTATCACTCATTGCTTCAGTCAATCAGCTAGGTTGTG AAAGTACCTAACTATCTATATGAAATATTAGTCTTATCAGCATGG