Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0554300-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21963654:21968219:1 gene:Os09g0554300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN likes 7a description:Auxin efflux carrier domain containing protein. (Os09t0554300-01)
Sequence	ATGGGCTTCTTGTCATTGCTTCTTGTGGCTTCTATGCCAATCGTTCAGGTCCTACTCATA GGTGTTATTGGAGCTTTTCTCGCTTCTGGTTACAGCAAAATTCTAACCTCAAGCGCTCTA AGGGATATGAACAAGGTTGTTTTCACTGTCTTCACACCATCCCTGATGTTTGCTAGCCTG GCTAAGACGGTCACACTTTCTGACGTCATTTCTTGGTGGTTTATGCCAGTTAATATAGGA ATCACATTCATTGTTGGTGGCACTCTAGGCTGGATAGCATGTAAAATACTGAAACCACCA CAGCATTTCCGAGGAATGATCATTGCCTTCTGTTCAGCAGGAAATCTTGGCAACTTGCTC TTGATCATTGTTCCAGCAGTCTGTGACGAAGACGGCAACCCGTTCGGAAAAGACCGGAGC CTTTGCCGCTCTCGTGGGCTCTCCTACTCATCATTATCCATGGCTCTTGGTGGCTTATTC ATATGGACACATACATACAGCCTCATGCAGAAGGCAGGCAAAATGTACCACAAGATGCAG TCCAAAAGCATCCAGTGCCCGGCCGACAGCGATGAAGAGCATCATCCTGCACAAGGTCAT GATCAAGTAAAATTAGACGGTGAAACTGCTTACGCTGATGAGGAGGCGGCTCTTCTGGTG TCAGCTAAACTGGCTCCTGAACACAATGAAGAGAACCAAATGGAAGCTCCACTTCTGACT TGCGAGAGAGAGATTGCTAACAAAGGAGGATTCTGGACAAACCTGAAGGAAACCGTCCAC CAGGTTGTCGAGGAGCTGATGGCACCACCAACTGTATCTGCAATACTTGGATTTGTTGTT GGCCTAGTCCCATGGTTGAAATCTCTTGTCATCGGCAATGGCGCCCCACTGAGAGTCATC CAGGAGTCCCTCCAACTAATGGGCAATGGCACGATTCCTTGCATCACCCTAATCCTAGGG GGGAATCTGACACAAGGGCTACGGAAGTCGGTGCTGAAGCGTACGGTGATCATCACGATC GTCTGCATACGCTACGTGATCCAACCCTTGATCGGGATGGCGGTTGTCCATGCTGCCTAT GGGGTTGGATTCTTGCCACACGATCCATTGTACCGCTACGTGCTGATGATGCAGTTCGCG CTGCCACCTGCAATGAACATCGGAACCATGGCTCAGCTGTTTGATGTTGGTCAAGAGGAA TGCTCAGTGATCTTCTTGTGGACTTACCTGATTGCTGCCATTGCACTCACGACGTGGTCG ACGATATTCATGTCCATCCTGTCTTGA

Peptide Sequence

PEP ID	Os09t0554300-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21963654:21968219:1 gene:Os09g0554300 transcript:Os09t0554300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN likes 7a description:Auxin efflux carrier domain containing protein. (Os09t0554300-01)
Sequence	MGFLSLLLVASMPIVQVLLIGVIGAFLASGYSKILTSSALRDMNKVVFTVFTPSLMFASL AKTVTLSDVISWWFMPVNIGITFIVGGTLGWIACKILKPPQHFRGMIIAFCSAGNLGNLL LIIVPAVCDEDGNPFGKDRSLCRSRGLSYSSLSMALGGLFIWTHTYSLMQKAGKMYHKMQ SKSIQCPADSDEEHHPAQGHDQVKLDGETAYADEEAALLVSAKLAPEHNEENQMEAPLLT CEREIANKGGFWTNLKETVHQVVEELMAPPTVSAILGFVVGLVPWLKSLVIGNGAPLRVI QESLQLMGNGTIPCITLILGGNLTQGLRKSVLKRTVIITIVCIRYVIQPLIGMAVVHAAY GVGFLPHDPLYRYVLMMQFALPPAMNIGTMAQLFDVGQEECSVIFLWTYLIAAIALTTWS TIFMSILS

Transcript Sequence

Transcript ID	Os09t0554300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21963654:21968219:1 gene:Os09g0554300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN likes 7a description:Auxin efflux carrier domain containing protein. (Os09t0554300-01)
Sequence	ATTACCCAACCTCAAGCTAGCTAGCTCTCCACCGTCTGCGCCCATTCAGAAAAGGAGAGT TTAATCCAACATCAGAAAAGATGGGCTTCTTGTCATTGCTTCTTGTGGCTTCTATGCCAA TCGTTCAGGTCCTACTCATAGGTGTTATTGGAGCTTTTCTCGCTTCTGGTTACAGCAAAA TTCTAACCTCAAGCGCTCTAAGGGATATGAACAAGGTTGTTTTCACTGTCTTCACACCAT CCCTGATGTTTGCTAGCCTGGCTAAGACGGTCACACTTTCTGACGTCATTTCTTGGTGGT TTATGCCAGTTAATATAGGAATCACATTCATTGTTGGTGGCACTCTAGGCTGGATAGCAT GTAAAATACTGAAACCACCACAGCATTTCCGAGGAATGATCATTGCCTTCTGTTCAGCAG GAAATCTTGGCAACTTGCTCTTGATCATTGTTCCAGCAGTCTGTGACGAAGACGGCAACC CGTTCGGAAAAGACCGGAGCCTTTGCCGCTCTCGTGGGCTCTCCTACTCATCATTATCCA TGGCTCTTGGTGGCTTATTCATATGGACACATACATACAGCCTCATGCAGAAGGCAGGCA AAATGTACCACAAGATGCAGTCCAAAAGCATCCAGTGCCCGGCCGACAGCGATGAAGAGC ATCATCCTGCACAAGGTCATGATCAAGTAAAATTAGACGGTGAAACTGCTTACGCTGATG AGGAGGCGGCTCTTCTGGTGTCAGCTAAACTGGCTCCTGAACACAATGAAGAGAACCAAA TGGAAGCTCCACTTCTGACTTGCGAGAGAGAGATTGCTAACAAAGGAGGATTCTGGACAA ACCTGAAGGAAACCGTCCACCAGGTTGTCGAGGAGCTGATGGCACCACCAACTGTATCTG CAATACTTGGATTTGTTGTTGGCCTAGTCCCATGGTTGAAATCTCTTGTCATCGGCAATG GCGCCCCACTGAGAGTCATCCAGGAGTCCCTCCAACTAATGGGCAATGGCACGATTCCTT GCATCACCCTAATCCTAGGGGGGAATCTGACACAAGGGCTACGGAAGTCGGTGCTGAAGC GTACGGTGATCATCACGATCGTCTGCATACGCTACGTGATCCAACCCTTGATCGGGATGG CGGTTGTCCATGCTGCCTATGGGGTTGGATTCTTGCCACACGATCCATTGTACCGCTACG TGCTGATGATGCAGTTCGCGCTGCCACCTGCAATGAACATCGGAACCATGGCTCAGCTGT TTGATGTTGGTCAAGAGGAATGCTCAGTGATCTTCTTGTGGACTTACCTGATTGCTGCCA TTGCACTCACGACGTGGTCGACGATATTCATGTCCATCCTGTCTTGAGGTTGAGGGTGAC AAGAAGAACCAACTTTGTGGCAATATTGGTTTAGCTGGAATGATTCAGCTCACGGATAAA ATGTAAAGAAGCCGGAGACAATGAGCCTCTCCGAAAGAGCCGAAACTGAGGCTTGCCCAT GAGCACCACACGTCCACACGTGTATAGAAATTGAAGCAGTATTTTTTTAGATAATGAAAA ATAGCATGGTGGCCCGCGTAGATAACTATAATTTTTTTAACATATTAAAAAATATTTTTA TTTTTTTCAGTTATTTCAAAATTGTATTTTTTATATGGACTCTATACTCTACTCCCAATC ATCCTCACTTTATTAAATTTCTAATTTTGTAGTTCGAAATTTTGTTATTTCTAAATTATA CTCTTCTTATATGGACTTAATAGTCTATCGTCTTCTCTAAATATTCTTTTTTTATTTGAA ATTTTACTTATTTCTAAACTGTACTCCTATATGGACTTAGACTGGTGTAACGCACATCAG TCGTGGCGTTGGTAGGAAATACTTAACAATTCAATAAAAACCCTAATTTTCG