Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0552500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21891811:21893285:-1 gene:Os09g0552500 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os09t0552500-01)
Sequence	ATGGCGGCACTTCCCAAGGCCGGCAAGCCGCTCGTCGAGAATGACGCCGGCTCATACCTC GCGTGGTCCGGCAAGAACCAGCCGGCCCTCGCCGGCGAGAAGCTCGGCTGCGGCCTGCTC GTCCTGAAGCCCCTCGGCTTCGCGCTGCCGCACTACGCCGACTCCGGCAAGTTCGGCTAC GTTCTTGGCGGCAGCGCGGTGGTCGGGGTTCTTCCGGTGGGGTTGGACGCCAGGGAGAGG GTGGTGCGGCTCGAGGCCGGCGACGTGATCGCCATGCGCGCCGGGGAGGTCACGTGGTGG TACAACGACGCGGACGGTGAGGATGTCACCATCGTGTTCATGGGCGACACCGCCCGCGCC GCCAGCCCCGGCGACATCTCGTACTTCGTCCTCGCCGGCCCGATGGGCGTCCTTGGAGGC CTCGACGCCGGCCTCCTCGCCACGGCGTCGGGGCTGACGTCGCCGGAGCAGGCGGCCACC GCCTTCCGCAGCCAGCCCGCCGTGCTGCTCACCAGGCTGAGCCGCAAGCTGCAAGACGTC CGCCCACGCGAGCACGACAGGCACGGGATCGTCGTGAACGCCGCGCGCATGCCGGCGGAC AGCAGCACCGGCGGTGCCGCCGCCGGGACGAAGATTGTCACCGCGGCGCACCTGCCGGTG CTGGGGCAGCTCGGGTTCAGCGTCGGGCTCACGCCTCTCGACGCGGGCGCCGCGGTGCGC GGGCCCTGGGTGCTCCGCGACGCCGCGGCGCAGGCGGTGTACGTCGCCCGTGGAAGCGGG CGCGTCCAGGTCGCCGGCGCCGGCGGCGCGTCGACGCTGCTCGACGCGGAGGCCGCGGCG GGCAGCCTGCTCGTCGTGCCGCGGTACGCGGTGGCGCTCGTGGGCGTGGACGCCGGCGGC ATGGAGCTGGTGTCGCTGATCAAAAGCCCCAGGCCGGCGATGAAGCAGTTCACCGGGAAG GGATCGGTGATCGGCGGCCTGACGCCGGAGATCGTGCAGGCGGCGCTCAACGTGTCGCCG GAGTTGGTCGAGCAGCTCAGGATGACCAAGTGA

Peptide Sequence

PEP ID	Os09t0552500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21891811:21893285:-1 gene:Os09g0552500 transcript:Os09t0552500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os09t0552500-01)
Sequence	MAALPKAGKPLVENDAGSYLAWSGKNQPALAGEKLGCGLLVLKPLGFALPHYADSGKFGY VLGGSAVVGVLPVGLDARERVVRLEAGDVIAMRAGEVTWWYNDADGEDVTIVFMGDTARA ASPGDISYFVLAGPMGVLGGLDAGLLATASGLTSPEQAATAFRSQPAVLLTRLSRKLQDV RPREHDRHGIVVNAARMPADSSTGGAAAGTKIVTAAHLPVLGQLGFSVGLTPLDAGAAVR GPWVLRDAAAQAVYVARGSGRVQVAGAGGASTLLDAEAAAGSLLVVPRYAVALVGVDAGG MELVSLIKSPRPAMKQFTGKGSVIGGLTPEIVQAALNVSPELVEQLRMTK

Transcript Sequence

Transcript ID	Os09t0552500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21891811:21893285:-1 gene:Os09g0552500 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os09t0552500-01)
Sequence	ATAATAACGCGGATCAGCTAAGAGCGATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT CTTCTTCTTGCTTGTTGTTGTAGCATTTGATTTTAGATATGGCGGCACTTCCCAAGGCCG GCAAGCCGCTCGTCGAGAATGACGCCGGCTCATACCTCGCGTGGTCCGGCAAGAACCAGC CGGCCCTCGCCGGCGAGAAGCTCGGCTGCGGCCTGCTCGTCCTGAAGCCCCTCGGCTTCG CGCTGCCGCACTACGCCGACTCCGGCAAGTTCGGCTACGTTCTTGGCGGCAGCGCGGTGG TCGGGGTTCTTCCGGTGGGGTTGGACGCCAGGGAGAGGGTGGTGCGGCTCGAGGCCGGCG ACGTGATCGCCATGCGCGCCGGGGAGGTCACGTGGTGGTACAACGACGCGGACGGTGAGG ATGTCACCATCGTGTTCATGGGCGACACCGCCCGCGCCGCCAGCCCCGGCGACATCTCGT ACTTCGTCCTCGCCGGCCCGATGGGCGTCCTTGGAGGCCTCGACGCCGGCCTCCTCGCCA CGGCGTCGGGGCTGACGTCGCCGGAGCAGGCGGCCACCGCCTTCCGCAGCCAGCCCGCCG TGCTGCTCACCAGGCTGAGCCGCAAGCTGCAAGACGTCCGCCCACGCGAGCACGACAGGC ACGGGATCGTCGTGAACGCCGCGCGCATGCCGGCGGACAGCAGCACCGGCGGTGCCGCCG CCGGGACGAAGATTGTCACCGCGGCGCACCTGCCGGTGCTGGGGCAGCTCGGGTTCAGCG TCGGGCTCACGCCTCTCGACGCGGGCGCCGCGGTGCGCGGGCCCTGGGTGCTCCGCGACG CCGCGGCGCAGGCGGTGTACGTCGCCCGTGGAAGCGGGCGCGTCCAGGTCGCCGGCGCCG GCGGCGCGTCGACGCTGCTCGACGCGGAGGCCGCGGCGGGCAGCCTGCTCGTCGTGCCGC GGTACGCGGTGGCGCTCGTGGGCGTGGACGCCGGCGGCATGGAGCTGGTGTCGCTGATCA AAAGCCCCAGGCCGGCGATGAAGCAGTTCACCGGGAAGGGATCGGTGATCGGCGGCCTGA CGCCGGAGATCGTGCAGGCGGCGCTCAACGTGTCGCCGGAGTTGGTCGAGCAGCTCAGGA TGACCAAGTGAGCGAAGCCAACTCCGGATTTGATCTCTCCGGCGATGGGGTGTGGTGATG CCCACAGTAGAACACTGCGCGTGTCTTTGTCTTTCAGTCTTCACCTTGCGAGAAGTCATG GCAGGATTAAGTGTTGATCAGTCTCAGCATGCGAATAATGTCACCAAGTACAATAATAAT CGGAACTAGCAGTGCAATAATTAAAGCTGAAAATGGATGGATCGATGAAATTTTACTTTT