Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0549700-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:21745879:21746804:-1 gene:Os09g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein-related. (Os09t0549700-01)
Sequence

ATGTCGATCGCCAAGCGGTACGTGCTGCGCCTGTTCATCTCGCTCAAGTACGTGACGGCG
AACGTGGTGGACCGCCAGAGCGGGCGCGTCGTGGTGACCGCGTCCTCTGTGGAGAAGCCC
CTCCGGGACGGGCTCGAGTGCGGCCGCACCTGCAACGCCAAGGCCGCCGCTGCCGTCGGG
GAGGTGCTCGCCATGCGCCTCAAGGTGGACGGCCTGGCACGTGAGCCCATACACGCTGAC
GCCACCAAGGAGGTGGAGAAGAAGGGGTTCAAGAACCGCACCAAGGTCTGGGCCATCCTC
AACGCGCTGCGCGAACACGGCGTCAACCTCCGCCTTGACGACGACGGCGATCATAGGCCA
CACGTCTGA

Peptide Sequence

PEP ID

Os09t0549700-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:21745879:21746804:-1 gene:Os09g0549700 transcript:Os09t0549700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein-related. (Os09t0549700-01)
Sequence

MSIAKRYVLRLFISLKYVTANVVDRQSGRVVVTASSVEKPLRDGLECGRTCNAKAAAAVG
EVLAMRLKVDGLAREPIHADATKEVEKKGFKNRTKVWAILNALREHGVNLRLDDDGDHRP
HV

Transcript Sequence

Transcript ID

Os09t0549700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:21745879:21746804:-1 gene:Os09g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein-related. (Os09t0549700-01)
Sequence

AGAGTGCGAGTGAACGACACGACGAGGACCAGAAAGCTCTCCGCACGCGCGCCGCCGCCG
CCGCCGCCGTCGCCGCCGCCGTACTCCTCGTCCTGCTGCTCTCGCGGAACCCTTCGTCTT
TGCTGCCTCAGTACGCCCGCATTCAACCTGTCAGCTCGCGGCTGTCTGCGCTCCGTCCGT
GGCCCCGCGCGCTAGCTGTTCGGGAGAATGCCACTGAGGAGTTCGCTTCGGGCTTAGGCG
CCCTGTGCTGTTTCATTTCAGCTGTGTTTTGTTCGATCGATGTCGATCGCCAAGCGGTAC
GTGCTGCGCCTGTTCATCTCGCTCAAGTACGTGACGGCGAACGTGGTGGACCGCCAGAGC
GGGCGCGTCGTGGTGACCGCGTCCTCTGTGGAGAAGCCCCTCCGGGACGGGCTCGAGTGC
GGCCGCACCTGCAACGCCAAGGCCGCCGCTGCCGTCGGGGAGGTGCTCGCCATGCGCCTC
AAGGTGGACGGCCTGGCACGTGAGCCCATACACGCTGACGCCACCAAGGAGGTGGAGAAG
AAGGGGTTCAAGAACCGCACCAAGGTCTGGGCCATCCTCAACGCGCTGCGCGAACACGGC
GTCAACCTCCGCCTTGACGACGACGGCGATCATAGGCCACACGTCTGATGGGCGACACTT
CATTCGGTCCGTCAACTCGTTTCTTTTTACTACTATCATTCCTCTGTTGAATGTTTTATA
TTGTTGCTGAAACTTCGAAAGATTATAGAATTACTGCTGTTGTAGCACAGGTATCAAATC
AATTGTTTCTTGAAATCGACTGTTGTAGCATGGGAATTAAACAACGGATAGGCTTCGGAG
ACGCATGAAAACTTCAATTAAGGTTTTGGTGTACTACTGGTAGCAAACCACAATTAGACT
ACAGAAAATAAAGTTTATTTGCAATG