Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0549600-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:21744755:21745868:1 gene:Os09g0549600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os09t0549600-00)
Sequence

ATGGAGATGGATGGAGTGAAGCAATTCAGGCTCCAAATCGACATGCAGTGCCGCTGCATG
GGTTGCATCAGGAAGATCGAGAAGGCAATGGGTTGCATCGGAAGCGTCACTGGAGTCGAA
ACTTCAGTAGCAGATGTTGATACAGGGATTGTGGCAGTGGCCGGGAAGGTGAATCCAACA
ATGCTTTGTCACTGGCTCAAGAGGAGGATAAGGAAAGACGTCAAAATTGTGTACCCTGAT
CAACAAGTTCAGAACAGCAAGCAGAAACTGATAATGGTTCTAGGGAGCAGTTCCAATGCT
AAGGGTGCACATAATACACCATCAGCTCTACCAATACAAGATCATATGTCCTGGGACTCA
GTACCACCAATAGTTCAATCAAACCATCAGAGCTTGCCTTTGATCGAGCAGAAGATCAGG
GAACTCGAGAAGGTCAGGGACATGCTGAAGATTCAGAACCTGGAGACAGAGCTGGGTGCT
GTCAGGTGTGAGCTTAAACAGTCGCGGGAAGCTATCAATGGTAGTAAGAAGGCTGTGATG
GATAGTGCTCTGAATCAGCTGGAAGCCTATCATAAACTAGAAGCACTAAGTCACTCACCA
TATGAGTCATGCTACCCTAGTCAATAA

Peptide Sequence

PEP ID

Os09t0549600-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:21744755:21745868:1 gene:Os09g0549600 transcript:Os09t0549600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os09t0549600-00)
Sequence

MEMDGVKQFRLQIDMQCRCMGCIRKIEKAMGCIGSVTGVETSVADVDTGIVAVAGKVNPT
MLCHWLKRRIRKDVKIVYPDQQVQNSKQKLIMVLGSSSNAKGAHNTPSALPIQDHMSWDS
VPPIVQSNHQSLPLIEQKIRELEKVRDMLKIQNLETELGAVRCELKQSREAINGSKKAVM
DSALNQLEAYHKLEALSHSPYESCYPSQ

Transcript Sequence

Transcript ID

Os09t0549600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:21744755:21745868:1 gene:Os09g0549600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os09t0549600-00)
Sequence

ATGGAGATGGATGGAGTGAAGCAATTCAGGCTCCAAATCGACATGCAGTGCCGCTGCATG
GGTTGCATCAGGAAGATCGAGAAGGCAATGGGTTGCATCGGAAGCGTCACTGGAGTCGAA
ACTTCAGTAGCAGATGTTGATACAGGGATTGTGGCAGTGGCCGGGAAGGTGAATCCAACA
ATGCTTTGTCACTGGCTCAAGAGGAGGATAAGGAAAGACGTCAAAATTGTGTACCCTGAT
CAACAAGTTCAGAACAGCAAGCAGAAACTGATAATGGTTCTAGGGAGCAGTTCCAATGCT
AAGGGTGCACATAATACACCATCAGCTCTACCAATACAAGATCATATGTCCTGGGACTCA
GTACCACCAATAGTTCAATCAAACCATCAGAGCTTGCCTTTGATCGAGCAGAAGATCAGG
GAACTCGAGAAGGTCAGGGACATGCTGAAGATTCAGAACCTGGAGACAGAGCTGGGTGCT
GTCAGGTGTGAGCTTAAACAGTCGCGGGAAGCTATCAATGGTAGTAAGAAGGCTGTGATG
GATAGTGCTCTGAATCAGCTGGAAGCCTATCATAAACTAGAAGCACTAAGTCACTCACCA
TATGAGTCATGCTACCCTAGTCAATAA