Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0549500-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:21742555:21743600:-1 gene:Os09g0549500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os09t0549500-00)
Sequence

ATGGCAATGGCATCCAAACGAGGGGAAAAGAAACCGCAGGCCAGAATGTCTCGCCGGCGG
CAGCAGCCGGGCTCCGACTCCGACGGCGAGGACGACAGCTTCCTCTACCGCTACCCGCTC
CCCTCCGCCGCCGCTCCCGGCGCCTCGGGGCCCTCCTCGCACGGCGGCAAGCCCGGCGGC
GGCGGCGGCTCGGGCGGCCTCGCGCCGTCCAAGTCGACGGTGTACGTGTCCAACCTCGAC
TTCGCGCTCACCAACTCCGACCTCCACACCCTCTTCTCCCGCTTCGGCCGCGTCGCCCGC
GTCACCGTCCTCAAGGACCGGGACTCCCGCCGCAGCCGGGGCGTGGCCTTCGTCCTCTTC
GTCCGCCGCGAGGACGCCGCCGCCGCCGCCGCCGAGATGCACGGCAAGGTCCTCAACGGC
CGCACCCTCTCCGCCTCCATCGCGGAGGACAACGGCCGCGCAGCCGAGTTCATCCGCCGC
CGCGTCTACCGCGACAAGTCCCGCTGCTACGAGTGCGGCGAGGAGGGCCACCTCTCCTAC
GAGTGCCCTCGCAACCAGCTCGGCCCCCGCGAGAGGCCGCCGCCGTCTAAGAAATCGCGG
CGCGGCGGCGGCAGCGGCGGTGGTGGAGGAGGCGGCGGAGGCGGTCGCGGGGCTTCCTGG
CAGTCGGATGATGAGGATAGCGCCGCGGCGTTCGAGGACGACAGGTGGGCGTCAGTGGTG
GATACGAGAGGGGAGGAGGAGAAGGCAGCTGGGAAGGGCGAGGGGAAGGCGATGAAGAAG
GAGAAGAGGAAAGGCTACTTCAGCGACGAGAGCGATGAGGATGAGGACTGA

Peptide Sequence

PEP ID

Os09t0549500-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:21742555:21743600:-1 gene:Os09g0549500 transcript:Os09t0549500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os09t0549500-00)
Sequence

MAMASKRGEKKPQARMSRRRQQPGSDSDGEDDSFLYRYPLPSAAAPGASGPSSHGGKPGG
GGGSGGLAPSKSTVYVSNLDFALTNSDLHTLFSRFGRVARVTVLKDRDSRRSRGVAFVLF
VRREDAAAAAAEMHGKVLNGRTLSASIAEDNGRAAEFIRRRVYRDKSRCYECGEEGHLSY
ECPRNQLGPRERPPPSKKSRRGGGSGGGGGGGGGGRGASWQSDDEDSAAAFEDDRWASVV
DTRGEEEKAAGKGEGKAMKKEKRKGYFSDESDEDED

Transcript Sequence

Transcript ID

Os09t0549500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:21742555:21743600:-1 gene:Os09g0549500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os09t0549500-00)
Sequence

ATGGCAATGGCATCCAAACGAGGGGAAAAGAAACCGCAGGCCAGAATGTCTCGCCGGCGG
CAGCAGCCGGGCTCCGACTCCGACGGCGAGGACGACAGCTTCCTCTACCGCTACCCGCTC
CCCTCCGCCGCCGCTCCCGGCGCCTCGGGGCCCTCCTCGCACGGCGGCAAGCCCGGCGGC
GGCGGCGGCTCGGGCGGCCTCGCGCCGTCCAAGTCGACGGTGTACGTGTCCAACCTCGAC
TTCGCGCTCACCAACTCCGACCTCCACACCCTCTTCTCCCGCTTCGGCCGCGTCGCCCGC
GTCACCGTCCTCAAGGACCGGGACTCCCGCCGCAGCCGGGGCGTGGCCTTCGTCCTCTTC
GTCCGCCGCGAGGACGCCGCCGCCGCCGCCGCCGAGATGCACGGCAAGGTCCTCAACGGC
CGCACCCTCTCCGCCTCCATCGCGGAGGACAACGGCCGCGCAGCCGAGTTCATCCGCCGC
CGCGTCTACCGCGACAAGTCCCGCTGCTACGAGTGCGGCGAGGAGGGCCACCTCTCCTAC
GAGTGCCCTCGCAACCAGCTCGGCCCCCGCGAGAGGCCGCCGCCGTCTAAGAAATCGCGG
CGCGGCGGCGGCAGCGGCGGTGGTGGAGGAGGCGGCGGAGGCGGTCGCGGGGCTTCCTGG
CAGTCGGATGATGAGGATAGCGCCGCGGCGTTCGAGGACGACAGGTGGGCGTCAGTGGTG
GATACGAGAGGGGAGGAGGAGAAGGCAGCTGGGAAGGGCGAGGGGAAGGCGATGAAGAAG
GAGAAGAGGAAAGGCTACTTCAGCGACGAGAGCGATGAGGATGAGGACTGAGTTTTCAGT
GTATGATTCCAGCGTTCTTGTGTTATGTGAGATTGTAGCTTCTGTATCCTAGGTTTCCAG
AAATTTCTTGAGTTAATTGATGAATAATTTCTTGCAGCAAACTTATTGCCATCTGCATTT
CCATGCTCCCATGCTTGCTAAGCTTATTAGTTTTGAACAATATCATTGCTCTGGTTAGTT
GGCATGCTGAGAGGAACTTGCTCATT