Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0549450-00
CDS Infomation	cds chromosome:IRGSP-1.0:9:21735447:21740544:1 gene:Os09g0549450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NIN-like protein 1. (Os09t0549450-00)
Sequence	ATGGAAGAGGGAGACCCCCAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCG GCGGCGGCAGTCGACTTGGATCTCCTTGAGCAGCTTCTCTCAGCCGACAACGCCTGGCTT GAAGTGGCAGCAAACACTTCACGCTCACCCAACTTCTTTGCTACCCCCTCCAACTGCTTG ACAGATGCTTCGGTCGCCACCACCACACCTGCAAATTCATGGTGGATTCAGCCGAGCGGT GCAAGCACCTCAGTTCGGGAACGGTTTGACCAAGCTCTAGCTTACATCAGGGAGACACAG AGCGACGCCGATGTGCTTGTGCAGCTCTGGGTGCCAGTCAAGGGCAACGATGGTCAGCTG GTGTTGACGACGAGCGGGCAGCCATTCACTCTCGATCAGAGGTCCAATAGCCTCATACAG TTCAGGGAGGTTTCGACAAAGTACCAGTTCTCTGCAGATGTTGCTTCAGGTTCCTCACCT GGGCTACCAGGGAGGGTGTTCATCGGTAGGCTTCCTGAATGGTCACCAGACGTTCGATAC TTCACCAGCTATGAGTACCCTAGGATCAACCATGCACAATATTTGGATGTCCACGGGACG ATGGGGCTGCCGGTGTTTGAGAGGGGGAACTACTCATGCTTAGGTGTCATCGAGTTGATC ATGACCAAGCAGAAGCTCAACTTCACCTCCGAGCTCAATACCATTTGCAGTGCTCTCCAG GCAGTTAACCTGACAAGCACAGAAGTTTCAAGCATTCCGCGCGCAAAGCTTAACAGTGCT TCCTACAAAGATGCTTTACCAGAGATACTAGAAGTCCTGAGAGCAGCCTGCATCACCCAC AAGCTACCATTAGCTCAGACCTGGGTCACATGTGCTCAACAAGGAAAGCGGGGCAGTCGC CATTCTGACGAGAACTACAAGTACTGCATTTCCACCATTGATGCAGCATGCTATGTGAAT GAACCCCGGATGCAGAGCTTCCACGAGGCCTGCTCCGAACACCACCTGCTACGGGGGCAG GGGGTTGCAGGGAAAGCCTTCACCACAAACCAGCCATGCTTCCTACCAGATATTGGATCC TCCACTAAACTGGAGTACCCATTGTCTCACCATGCTAAGATTTTCAATTTAAAAGGTGCA GTGGCAATCCGATTGCGTTGCACGCGCACAGGGATTGCCGACTTTGTGCTAGAGTTCTTT CTGCCAACTGACTGTGAAGTACTTGAGGAGCAGAAGGCAGTGCTGGACTCATTATCAGGC ACCATGAGAAGTGTTTGCCAAACTTTACGTGTTGTTACTGACAAGGAGATGGAGGATGAG GCCATGAGAGAAATGAATGAGCTGAACTCATTTAGTCCTCGGGGCAAGAACAAAGTTGAG GAGTTATCCTTTGGAGACAACACAAGAGGGGATAGAGAGGAGGCATCTTGGACAACCTTA GTAGGGACTTCACAGAAAGGATCAGATTTAGCTGAATTGCATACACATGGAATGTTATCA CATGGAGGGCATGGTTCATCTCAAGCTGGTGATCAAACAAGTAAAGAAGGTAGCAAAGTG AAAAGGCGTACAAAGACGGAGAAGACCGTGAGCTTGCAGGTCCTTCGGCAGTACTTTGCT GGGAGCCTGAAGGATGCAGCAAAGAGCCTTGGAGTGTGCCCAACCACCCTGAAAAGAATA TGCAGGCAGCATGGCATAAACCGCTGGCCATCACGGAAGATAAAGAAAGTAGACCATTCT CTAAGGAAACTGCAGCAAATCATTGATTCAGTTCATGGAGCAGAGACAGCTTTCCAGCTT AACACCCTCTACAAGGACCTCACAAACACCTCTGTATCATCTGACAACAATTTGTCAGGA AGTGTCACAGTTCCTCTGGCTAACCAGAACAATCTAGACTTTGAAATGCACCAACACCAC AGGTTAAGCAGCAATATTCCATCGACTTCACTCTCACACTCATCATGCAGCCAAAGTTCC GATTCAAGCCCTTCCTGCAGTGGAGGAGCAACAAAACATTCACCCCAGGTTGGAGCTGAT CAGGTGAGGTCAGGATGTCTTCCACAACATAGCCCTGTCCAGACTCTGCAAACAGAAGCT GCTTCAATAAATGAACATTTCTCAGGTCAGGAAGCACCAATAGATCTCTTACAGGATGTT GCTGAAAAGGCAAATGGTGAACAGCACATGTCTCAAAGTCCATCATCCCCCAAGCAGACT GCAAATGTAGGTATGAGAGTAAAGGTCACTTTTGGCTCAGAAAAGGTGAGGTTCAGATTG AAACCTGAGTGTGACTTTCAAGAACTGAAGCAGGAGATATCAAAACGTCTGAGTATAGCA GACATGAATTCCTTGATTGTAAAGTATTTGGATGACGATTCAGAATGGGTCTTGATGACA TGTGATGCAGATTTACACGAGTGTTTTCATGTTTATAAACTAGCAGATATCCAAACAATC AAGATTTCAGTTCATCTGGCTGCTAGTCCAACAACAAGGATCACCATTGGTCACACTGGT TTCTCATGA

Peptide Sequence

PEP ID	Os09t0549450-00
PEP Infomation	pep chromosome:IRGSP-1.0:9:21735447:21740544:1 gene:Os09g0549450 transcript:Os09t0549450-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NIN-like protein 1. (Os09t0549450-00)
Sequence	MEEGDPQPSISLARTPSEGAAAAVDLDLLEQLLSADNAWLEVAANTSRSPNFFATPSNCL TDASVATTTPANSWWIQPSGASTSVRERFDQALAYIRETQSDADVLVQLWVPVKGNDGQL VLTTSGQPFTLDQRSNSLIQFREVSTKYQFSADVASGSSPGLPGRVFIGRLPEWSPDVRY FTSYEYPRINHAQYLDVHGTMGLPVFERGNYSCLGVIELIMTKQKLNFTSELNTICSALQ AVNLTSTEVSSIPRAKLNSASYKDALPEILEVLRAACITHKLPLAQTWVTCAQQGKRGSR HSDENYKYCISTIDAACYVNEPRMQSFHEACSEHHLLRGQGVAGKAFTTNQPCFLPDIGS STKLEYPLSHHAKIFNLKGAVAIRLRCTRTGIADFVLEFFLPTDCEVLEEQKAVLDSLSG TMRSVCQTLRVVTDKEMEDEAMREMNELNSFSPRGKNKVEELSFGDNTRGDREEASWTTL VGTSQKGSDLAELHTHGMLSHGGHGSSQAGDQTSKEGSKVKRRTKTEKTVSLQVLRQYFA GSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKVDHSLRKLQQIIDSVHGAETAFQL NTLYKDLTNTSVSSDNNLSGSVTVPLANQNNLDFEMHQHHRLSSNIPSTSLSHSSCSQSS DSSPSCSGGATKHSPQVGADQVRSGCLPQHSPVQTLQTEAASINEHFSGQEAPIDLLQDV AEKANGEQHMSQSPSSPKQTANVGMRVKVTFGSEKVRFRLKPECDFQELKQEISKRLSIA DMNSLIVKYLDDDSEWVLMTCDADLHECFHVYKLADIQTIKISVHLAASPTTRITIGHTG FS

Transcript Sequence

Transcript ID	Os09t0549450-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21735447:21740544:1 gene:Os09g0549450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NIN-like protein 1. (Os09t0549450-00)
Sequence	GCCTTTGGAATGAATGGTGGGAGGTGTTCTGGTGGAGCACTAAACCTTTTCTAGAGCTAC TACTTGTTGGAGGCTAACACCGAGCTAGGAAGAAGAAAGGAGACTTTTTCATGAGGAGAA GGGAGGCATACGATTACCAATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCC CAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCGGCGGCGGCAGTCGACTTG GATCTCCTTGAGCAGCTTCTCTCAGCCGACAACGCCTGGCTTGAAGTGGCAGCAAACACT TCACGCTCACCCAACTTCTTTGCTACCCCCTCCAACTGCTTGACAGATGCTTCGGTCGCC ACCACCACACCTGCAAATTCATGGTGGATTCAGCCGAGCGGTGCAAGCACCTCAGTTCGG GAACGGTTTGACCAAGCTCTAGCTTACATCAGGGAGACACAGAGCGACGCCGATGTGCTT GTGCAGCTCTGGGTGCCAGTCAAGGGCAACGATGGTCAGCTGGTGTTGACGACGAGCGGG CAGCCATTCACTCTCGATCAGAGGTCCAATAGCCTCATACAGTTCAGGGAGGTTTCGACA AAGTACCAGTTCTCTGCAGATGTTGCTTCAGGTTCCTCACCTGGGCTACCAGGGAGGGTG TTCATCGGTAGGCTTCCTGAATGGTCACCAGACGTTCGATACTTCACCAGCTATGAGTAC CCTAGGATCAACCATGCACAATATTTGGATGTCCACGGGACGATGGGGCTGCCGGTGTTT GAGAGGGGGAACTACTCATGCTTAGGTGTCATCGAGTTGATCATGACCAAGCAGAAGCTC AACTTCACCTCCGAGCTCAATACCATTTGCAGTGCTCTCCAGGCAGTTAACCTGACAAGC ACAGAAGTTTCAAGCATTCCGCGCGCAAAGCTTAACAGTGCTTCCTACAAAGATGCTTTA CCAGAGATACTAGAAGTCCTGAGAGCAGCCTGCATCACCCACAAGCTACCATTAGCTCAG ACCTGGGTCACATGTGCTCAACAAGGAAAGCGGGGCAGTCGCCATTCTGACGAGAACTAC AAGTACTGCATTTCCACCATTGATGCAGCATGCTATGTGAATGAACCCCGGATGCAGAGC TTCCACGAGGCCTGCTCCGAACACCACCTGCTACGGGGGCAGGGGGTTGCAGGGAAAGCC TTCACCACAAACCAGCCATGCTTCCTACCAGATATTGGATCCTCCACTAAACTGGAGTAC CCATTGTCTCACCATGCTAAGATTTTCAATTTAAAAGGTGCAGTGGCAATCCGATTGCGT TGCACGCGCACAGGGATTGCCGACTTTGTGCTAGAGTTCTTTCTGCCAACTGACTGTGAA GTACTTGAGGAGCAGAAGGCAGTGCTGGACTCATTATCAGGCACCATGAGAAGTGTTTGC CAAACTTTACGTGTTGTTACTGACAAGGAGATGGAGGATGAGGCCATGAGAGAAATGAAT GAGCTGAACTCATTTAGTCCTCGGGGCAAGAACAAAGTTGAGGAGTTATCCTTTGGAGAC AACACAAGAGGGGATAGAGAGGAGGCATCTTGGACAACCTTAGTAGGGACTTCACAGAAA GGATCAGATTTAGCTGAATTGCATACACATGGAATGTTATCACATGGAGGGCATGGTTCA TCTCAAGCTGGTGATCAAACAAGTAAAGAAGGTAGCAAAGTGAAAAGGCGTACAAAGACG GAGAAGACCGTGAGCTTGCAGGTCCTTCGGCAGTACTTTGCTGGGAGCCTGAAGGATGCA GCAAAGAGCCTTGGAGTGTGCCCAACCACCCTGAAAAGAATATGCAGGCAGCATGGCATA AACCGCTGGCCATCACGGAAGATAAAGAAAGTAGACCATTCTCTAAGGAAACTGCAGCAA ATCATTGATTCAGTTCATGGAGCAGAGACAGCTTTCCAGCTTAACACCCTCTACAAGGAC CTCACAAACACCTCTGTATCATCTGACAACAATTTGTCAGGAAGTGTCACAGTTCCTCTG GCTAACCAGAACAATCTAGACTTTGAAATGCACCAACACCACAGGTTAAGCAGCAATATT CCATCGACTTCACTCTCACACTCATCATGCAGCCAAAGTTCCGATTCAAGCCCTTCCTGC AGTGGAGGAGCAACAAAACATTCACCCCAGGTTGGAGCTGATCAGGTGAGGTCAGGATGT CTTCCACAACATAGCCCTGTCCAGACTCTGCAAACAGAAGCTGCTTCAATAAATGAACAT TTCTCAGGTCAGGAAGCACCAATAGATCTCTTACAGGATGTTGCTGAAAAGGCAAATGGT GAACAGCACATGTCTCAAAGTCCATCATCCCCCAAGCAGACTGCAAATGTAGGTATGAGA GTAAAGGTCACTTTTGGCTCAGAAAAGGTGAGGTTCAGATTGAAACCTGAGTGTGACTTT CAAGAACTGAAGCAGGAGATATCAAAACGTCTGAGTATAGCAGACATGAATTCCTTGATT GTAAAGTATTTGGATGACGATTCAGAATGGGTCTTGATGACATGTGATGCAGATTTACAC GAGTGTTTTCATGTTTATAAACTAGCAGATATCCAAACAATCAAGATTTCAGTTCATCTG GCTGCTAGTCCAACAACAAGGATCACCATTGGTCACACTGGTTTCTCATGAAGACACAAT GAGCCTCACTAGCTTGTGGGATGTCTTCAGAAACCCAGGGAAACCCAAAAAATGGTTGGC AGCCTGTGCAAGGTACCAAGTGCCACAATCAGATGCAGGTCTCCTGTTAGCTGGATTAGT CTTTAATCTGTTGCTGAGATTAGGAACTGCTGATTACACTGGACCAGTGTAATTTGATTG AGATCATAGGGTGAAATATATCTAAACCAGGTTAGCCCCAAGTATATTTACGTTCTTGGC ATGCTTATGTGCAATAATCCTTGCTGGCTACTGATCATTGATCAATGATCAGTTGATCAC CTGTGATAGTCCCTTCAAAGGATACTACAGCACTTGCCCCTCGTCTGAGTGACCAGCAGC AAAGTCTTCTTCCCCCTCTTTTGCCGAAAAAAAGCAGCAAGGACTTCAATTCTTTGGCAT GCTTCTCTGAAAATACAGTTTGACACAGCAATGGTTCTTAATAAGTTATAGATATTGGAG GATAGGATGCTTCCTTTGTTCAATTTGTTTGTCCATTGGAAAACAAAAATGTATGGTGCA CTCGTACAGCATGATGATGTGTTCTTTTTGGAGAGATTGTTGCTGTTATTCACGCAAAAA ATTGTGTTCTTTAAGAAGATTGGATTTT