Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0548700-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21696880:21701577:-1 gene:Os09g0548700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0515C11.3 protein. (Os09t0548700-01)
Sequence	ATGGAGAAGATCAAGAAGAGGGTGGCCATCGTCGGCGCCGGCGTGAGCGGCCTCGCCGCG TGCAAGCACGCGCTGGAGCGCGGCTTCCGGCCCGTCGTCTTCGAGGCCGACGGGGCCGGC GCCGTCGGCGGCGTGTGGGCGCGCACCATCGCCTCCACGCGGCTCCAGACGCCGCGCCCC TACTTCGAGTACTCCGACTTCCCGTGGCCGCCGGGCGTCACCGACCTGTACCCGGACCAC GACCAGGTGACGGCCTACCTGCGCTCGTACGCGGAGCGCTTCGGCGTGCTGGAGTGCGTC CGCTTCGGCTGCCGCGTCGCCGGCATGGAGTACGCCGCCGCCGGCGGGGAGGAGGAGGTC ATGGCCTGGGAGCACTGGGCCGGCAATGGCGAGGCGTTCGGCACCGGCCGCGGCGAGTGG CGGCTCACTGTGCAGAGCGGCCACAACATTGAGCTGCACGTCGCGGATTTCGTGGTGCTG TGCATCGGACGGTTCAGCGGCTTCCCCAACATGCCGAGATTTCCACCGGACAAAGGGCCA GAGGCGTTCGCCGGCACGGCGATCCACTCCATGGACTACTCCAACATGGGCGCCGCGAAG GCGGCTCAGCTCGTCAAGGGCAAGCGCGTCGCCGTCGTCGGCTACCAGAAATCCGCCGTC GACATCGCCGCCGAGTGCGCAGACGCCAATGGGGCGTCGCATCCGTGCACGATAGTGCTA CGCACGAAGCGATGGATCGTGCCGGACTTGTACGCTTGGGGCGTCCCGGTTCCGGTGTTC TACATCAACCGTTTGTCCCAGATCTTGCTTCACAAGCCTGGGGATGGCTTGATCCTTAGC TTTCTAGCCATCCTCTTATCACCACTGAGATGGCTCTTCGCCAAGTTTGTTGAGAGCTAC TACAAATGGGCTCTGCCCATGGAGAAGCACGGCATGGTGCCGGACGAGGATTTCATGGAG GCCATGTGCTCATGCTCTGTGATGAAGCTACCGGACAAGTTCTACGACAAGGTGGAGGAA GGAAGCATCGTTCTGAAGAAATCGAAGAGATTCAGCTTCTGCAAGGAAGGCCTGGTCGTG GAAGGCGACTCGTCTTCAGAGACCATAAAGAGCGACGTGGTGATCTTCGCTACAGGGTTC AATGGCGACCAGAAGATCAGGGAGATGTTCAAATCGCCATTGTTCAGAGAAATCGTGGCC GGCCCACCTTCCAGCATAGTTCCACACTTCAGGCAATGCATCCATCCTAGGATCCCACAG CTGGCGATCATCGGCTACGCTGAAAGCTGGTCGAACCTCTGCGTGTCCGAGCTACTGTCC AAGTGGCTGGCACATTTCCTCCATGGAAGCTTCAGATTGCCAAGCGTAAAGGAGATGGAG GAGGACATAGATGAATGGGACAAGTACATGAAACGGTATTCCCCCGGCCGTTTCCGTCGA TCTTGCATTGGGCCGGTGAGCGTGCTGTGCAGTGATCGGCTGTGCCAAGACATGGGGGTT CAACGACGGAGGAAGAAGTGGTTGCTGGCAGATTGGTTGGTACCCTACGGACCAGCCGAT TACGCTGATATCAACTTGAACAGCTGA

Peptide Sequence

PEP ID	Os09t0548700-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21696880:21701577:-1 gene:Os09g0548700 transcript:Os09t0548700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0515C11.3 protein. (Os09t0548700-01)
Sequence	MEKIKKRVAIVGAGVSGLAACKHALERGFRPVVFEADGAGAVGGVWARTIASTRLQTPRP YFEYSDFPWPPGVTDLYPDHDQVTAYLRSYAERFGVLECVRFGCRVAGMEYAAAGGEEEV MAWEHWAGNGEAFGTGRGEWRLTVQSGHNIELHVADFVVLCIGRFSGFPNMPRFPPDKGP EAFAGTAIHSMDYSNMGAAKAAQLVKGKRVAVVGYQKSAVDIAAECADANGASHPCTIVL RTKRWIVPDLYAWGVPVPVFYINRLSQILLHKPGDGLILSFLAILLSPLRWLFAKFVESY YKWALPMEKHGMVPDEDFMEAMCSCSVMKLPDKFYDKVEEGSIVLKKSKRFSFCKEGLVV EGDSSSETIKSDVVIFATGFNGDQKIREMFKSPLFREIVAGPPSSIVPHFRQCIHPRIPQ LAIIGYAESWSNLCVSELLSKWLAHFLHGSFRLPSVKEMEEDIDEWDKYMKRYSPGRFRR SCIGPVSVLCSDRLCQDMGVQRRRKKWLLADWLVPYGPADYADINLNS

Transcript Sequence

Transcript ID	Os09t0548700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21696880:21701577:-1 gene:Os09g0548700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0515C11.3 protein. (Os09t0548700-01)
Sequence	AAGCAGATCGACAGTGTACCGTCTCATTACACTTGTAAGCTTTAGCTCCGGGGCGATCGA TCTCGAATGGAGAAGATCAAGAAGAGGGTGGCCATCGTCGGCGCCGGCGTGAGCGGCCTC GCCGCGTGCAAGCACGCGCTGGAGCGCGGCTTCCGGCCCGTCGTCTTCGAGGCCGACGGG GCCGGCGCCGTCGGCGGCGTGTGGGCGCGCACCATCGCCTCCACGCGGCTCCAGACGCCG CGCCCCTACTTCGAGTACTCCGACTTCCCGTGGCCGCCGGGCGTCACCGACCTGTACCCG GACCACGACCAGGTGACGGCCTACCTGCGCTCGTACGCGGAGCGCTTCGGCGTGCTGGAG TGCGTCCGCTTCGGCTGCCGCGTCGCCGGCATGGAGTACGCCGCCGCCGGCGGGGAGGAG GAGGTCATGGCCTGGGAGCACTGGGCCGGCAATGGCGAGGCGTTCGGCACCGGCCGCGGC GAGTGGCGGCTCACTGTGCAGAGCGGCCACAACATTGAGCTGCACGTCGCGGATTTCGTG GTGCTGTGCATCGGACGGTTCAGCGGCTTCCCCAACATGCCGAGATTTCCACCGGACAAA GGGCCAGAGGCGTTCGCCGGCACGGCGATCCACTCCATGGACTACTCCAACATGGGCGCC GCGAAGGCGGCTCAGCTCGTCAAGGGCAAGCGCGTCGCCGTCGTCGGCTACCAGAAATCC GCCGTCGACATCGCCGCCGAGTGCGCAGACGCCAATGGGGCGTCGCATCCGTGCACGATA GTGCTACGCACGAAGCGATGGATCGTGCCGGACTTGTACGCTTGGGGCGTCCCGGTTCCG GTGTTCTACATCAACCGTTTGTCCCAGATCTTGCTTCACAAGCCTGGGGATGGCTTGATC CTTAGCTTTCTAGCCATCCTCTTATCACCACTGAGATGGCTCTTCGCCAAGTTTGTTGAG AGCTACTACAAATGGGCTCTGCCCATGGAGAAGCACGGCATGGTGCCGGACGAGGATTTC ATGGAGGCCATGTGCTCATGCTCTGTGATGAAGCTACCGGACAAGTTCTACGACAAGGTG GAGGAAGGAAGCATCGTTCTGAAGAAATCGAAGAGATTCAGCTTCTGCAAGGAAGGCCTG GTCGTGGAAGGCGACTCGTCTTCAGAGACCATAAAGAGCGACGTGGTGATCTTCGCTACA GGGTTCAATGGCGACCAGAAGATCAGGGAGATGTTCAAATCGCCATTGTTCAGAGAAATC GTGGCCGGCCCACCTTCCAGCATAGTTCCACACTTCAGGCAATGCATCCATCCTAGGATC CCACAGCTGGCGATCATCGGCTACGCTGAAAGCTGGTCGAACCTCTGCGTGTCCGAGCTA CTGTCCAAGTGGCTGGCACATTTCCTCCATGGAAGCTTCAGATTGCCAAGCGTAAAGGAG ATGGAGGAGGACATAGATGAATGGGACAAGTACATGAAACGGTATTCCCCCGGCCGTTTC CGTCGATCTTGCATTGGGCCGGTGAGCGTGCTGTGCAGTGATCGGCTGTGCCAAGACATG GGGGTTCAACGACGGAGGAAGAAGTGGTTGCTGGCAGATTGGTTGGTACCCTACGGACCA GCCGATTACGCTGATATCAACTTGAACAGCTGAAATGGTGATGGAATCTGAATCTTGAGG GCACCGATGCCACAGCCAGCCGCCGCATGCACCCTCCCCTCTCGCGCCGCCGCTCGCCGG CCGTCGAGGTAGTGCTGGTACACGTACGAGAGAAACCCCCACACGGCCATGAGCATGGCT ACCACCTTGGTGCCCGTCATCTTGTCCCCGAACAGCGCCACCGCCAGCACCGGCACCATC GGCAGCGCCAGGGTGCCCGTCACGTTCGCGAACAGCGACGACACCCTCGCGATCAGCCTC ACGGCGCCCAGCGTCGCCGCCTGCCACCCCACGGCGACCCCCACCACGGTCGCCGCGTAC GCCGCCTTCCCGCCCTTGAACGCCGCCATCTCGCCGCCGATCGTCCTCCACTCCCCCGAC GCGAACAGCGCCGTCGCCGACACCGTCGCGGCCACCGCGTTCGTGGAGATCTGCATCTTG AGCACCCACCGCGGCGTCGCTGCTCCGATCACCTTGTCGAAGGTGGCCTCGAACAGGGAC AGGATGAGCGCGTAGACGGCGGACGCGGACAGGGTGAGGACGACGCCGGCGGCGTGCTTG CCACGCTGAACGGCGTCGCCGCCGGCGCCGCCGCCGACGGAGGAGGAGGGGTCGTCGACG CCGAGCAGCGCGGCGGAGAAGGTGAGCACGACGACGGAGTTGACGACGAGCGGCGTGAAC CGCTGCGCGTTGATGAGGCGCGACGTGACCGCGTTGAACGCCAGCTGCGTCGCGGCGAGG AGCGAGAACGTGGACACCGGCAGGTACAGCATGGCGTACGAGTACATGAGGTTGTCGCAG CCGACGACGAGCCCGAGGGCCACGCAGATGGCGACCATCTTGGATGCCGCCGGCGCCGGC CGAGGCTCCCCGACGGCGGCGGCCCGCGGCGTGAGGAGGAAGGGGATGACCAGCAGCGGC GCTCCGGCGGACTGCGCGAGCGTGACCATCCATAGGCTGTTGCCGCCGGAGTTGTAGTAG AGGCGGGTGAGGAGAGGCGCCATTGCCTCCCCGACGAGCAGCATCAGCATGTCCACCATC ACTGGCACCCACCGACATCGTCGAACGCCTCTTCTCCTCGCGATCGGCGGCCCAAGCGCA GCTTGCCCCTTGCAGATTTCGCCATGGCAGGATTCCTCCTGTCCGGGAGTATCTTGGCAG AAAGAAAGTTACAGTAATTTAGCGTACGTGGTGTAAGTGTGATCGAACCAGTGAAGTTTA ATTATTGTCTGAGCCTGTTCTTAACGC