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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0547000-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:21604588:21605172:-1 gene:Os09g0547000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 54 description:Similar to Auxin induced protein. (Os09t0547000-01)
Sequence

ATGATCAGTTCAAGGAAGCTTGCTCAATTGGGCAAGAAGTGGCAGAGGATGGTGGCATCC
AGTGGGCGGCAGACTGCAAGCATCGATGGATGCTGCAGCACAGCCACAGCGTATGTCGCA
GACAAGGGCCATTGTGTGTTGTACACCACTGATGGGGCACGCTTCGAGGTTCCACTGATG
TACCTCAACACGGCGATCTTCTGTGAGCTCTTAAGGGTGTCTCAAGAGGAGTTTGGCTTT
GCAAGCAACAACAAGATCACATTGCCTTGTGATGCCTCAGTGATGGAGTACGTGATGTGT
TTGATTAGGAGAGATGCCTCTGAAGAGATTGAGAAGGCGCTCCTGAGCTCCATAGTTAGG
CCATGTCTTAATACTAGTGTGGTTCCACCAATGAGACTCAATCAGCAATTTGCTGTTTGC
AGCTAG

Peptide Sequence

PEP ID

Os09t0547000-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:21604588:21605172:-1 gene:Os09g0547000 transcript:Os09t0547000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 54 description:Similar to Auxin induced protein. (Os09t0547000-01)
Sequence

MISSRKLAQLGKKWQRMVASSGRQTASIDGCCSTATAYVADKGHCVLYTTDGARFEVPLM
YLNTAIFCELLRVSQEEFGFASNNKITLPCDASVMEYVMCLIRRDASEEIEKALLSSIVR
PCLNTSVVPPMRLNQQFAVCS

Transcript Sequence

Transcript ID

Os09t0547000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:21604588:21605172:-1 gene:Os09g0547000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 54 description:Similar to Auxin induced protein. (Os09t0547000-01)
Sequence

ATCTGCAAACAGTATAGCAATCTAAGCGTCTCTACTTCATTCCTTCAGAGCAAAAGTTCA
TTTAGCCAAGAACACAGAAGAACCATGATCAGTTCAAGGAAGCTTGCTCAATTGGGCAAG
AAGTGGCAGAGGATGGTGGCATCCAGTGGGCGGCAGACTGCAAGCATCGATGGATGCTGC
AGCACAGCCACAGCGTATGTCGCAGACAAGGGCCATTGTGTGTTGTACACCACTGATGGG
GCACGCTTCGAGGTTCCACTGATGTACCTCAACACGGCGATCTTCTGTGAGCTCTTAAGG
GTGTCTCAAGAGGAGTTTGGCTTTGCAAGCAACAACAAGATCACATTGCCTTGTGATGCC
TCAGTGATGGAGTACGTGATGTGTTTGATTAGGAGAGATGCCTCTGAAGAGATTGAGAAG
GCGCTCCTGAGCTCCATAGTTAGGCCATGTCTTAATACTAGTGTGGTTCCACCAATGAGA
CTCAATCAGCAATTTGCTGTTTGCAGCTAGTTTATATGGTTTTTGTTCAATCCTATGTAA
ATTATCAGGATTACAGATTATGAGACAAAGATACAAATTTTTCCT