Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0546900-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21602929:21603542:-1 gene:Os09g0546900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 53 description:Similar to Auxin induced protein. (Os09t0546900-01)
Sequence	ATGATCAGTGCCAAGAGGCTCGCTCAAATGGCAAAGAAGTGGCAAAGAATAGCAGCCCTC GGGAGGAAGAGGATCACATGGACGACACCCAAAGCAACCGATGAATGCTGCAGTTCTGTG GCAGTGAAGGGCCATTGCATCATGTACACTGCTGATGGGCGGCGGTTTGAGGTCCCGTTG GCGTTCCTCGCCACGACGATCTTCGCAGAGCTCCTCAGGATGTCTCAGGAGGAGTTTGGC TTCACAACCGATGGAGGGATCACATTGCCTTGTGATGCAGAGGTCATGGAGTATGTCCTG TGCTTGCTTAGAAGAAATGCATCCGAGGAAGTTGTCAGGGCATTCCTGAGCACCATTGTG AAATCTTGCCACTATGGGAATGGCTTTGCACAATCCTTGGGGTCTGTCCAACAAGTAGCA GCTTCTAGCTTCTGA

Peptide Sequence

PEP ID	Os09t0546900-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21602929:21603542:-1 gene:Os09g0546900 transcript:Os09t0546900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 53 description:Similar to Auxin induced protein. (Os09t0546900-01)
Sequence	MISAKRLAQMAKKWQRIAALGRKRITWTTPKATDECCSSVAVKGHCIMYTADGRRFEVPL AFLATTIFAELLRMSQEEFGFTTDGGITLPCDAEVMEYVLCLLRRNASEEVVRAFLSTIV KSCHYGNGFAQSLGSVQQVAASSF

Transcript Sequence

Transcript ID	Os09t0546900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21602929:21603542:-1 gene:Os09g0546900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 53 description:Similar to Auxin induced protein. (Os09t0546900-01)
Sequence	ATCATCCACAACCCAAACATATCTCATAGCTGAATACTACCTTATACAAAAAATTTCAGA CAAGAAAGAAGGAGAGCAACCATGATCAGTGCCAAGAGGCTCGCTCAAATGGCAAAGAAG TGGCAAAGAATAGCAGCCCTCGGGAGGAAGAGGATCACATGGACGACACCCAAAGCAACC GATGAATGCTGCAGTTCTGTGGCAGTGAAGGGCCATTGCATCATGTACACTGCTGATGGG CGGCGGTTTGAGGTCCCGTTGGCGTTCCTCGCCACGACGATCTTCGCAGAGCTCCTCAGG ATGTCTCAGGAGGAGTTTGGCTTCACAACCGATGGAGGGATCACATTGCCTTGTGATGCA GAGGTCATGGAGTATGTCCTGTGCTTGCTTAGAAGAAATGCATCCGAGGAAGTTGTCAGG GCATTCCTGAGCACCATTGTGAAATCTTGCCACTATGGGAATGGCTTTGCACAATCCTTG GGGTCTGTCCAACAAGTAGCAGCTTCTAGCTTCTGAAAGTTTACGTATAGCTAATCTTTC TCCTTTTATCTTCCTTTGAATGATGTAAATATGGAAACATGATGGGAGTAATAGACATTG TGATTATTCATATC