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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0546700-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:21599713:21600187:1 gene:Os09g0546700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 51 description:Similar to SAUR55 - auxin-responsive SAUR family member. (Os09t0546700-00)
Sequence

ATGATCCATTCCAAGAAGCTCGCTCAGCTTGCGAGGAAGCTGCAGAGGATCAAGACGGCC
GCCAGCAACAGGGAGGACGACGACGCCGGCTGCACGTCGACCTCGCCGTCGCCGGTGGCG
GACAAGGGCCACTGCGCCGTGTACACGTCCGACGGGGCGCGGTTCGAGGTGCCGTTGCCG
TACCTCGGCACGACGGTGTTCGTCGAGCTCCTGAGGATGTCGCAGGAGGAGTTCGGGTTC
GCCGGCGGCGACGGAAGGATCACGCTGCCCTGCGACGCGGCGGCGATGGAGTACGTGATG
TGCTTGCTGAGGAGGAACGCGTCGGAGGAGGTTGAGAGGGCGTTCCTGAGCTCGGTGGTG
ACGATGCCTTGCCAGAATTCAGGCTGCACGATGCCACCTGTGGCGTTGCACCATCAGTTT
GCAGTTTGTAGCTAA

Peptide Sequence

PEP ID

Os09t0546700-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:21599713:21600187:1 gene:Os09g0546700 transcript:Os09t0546700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 51 description:Similar to SAUR55 - auxin-responsive SAUR family member. (Os09t0546700-00)
Sequence

MIHSKKLAQLARKLQRIKTAASNREDDDAGCTSTSPSPVADKGHCAVYTSDGARFEVPLP
YLGTTVFVELLRMSQEEFGFAGGDGRITLPCDAAAMEYVMCLLRRNASEEVERAFLSSVV
TMPCQNSGCTMPPVALHHQFAVCS

Transcript Sequence

Transcript ID

Os09t0546700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:21599713:21600187:1 gene:Os09g0546700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 51 description:Similar to SAUR55 - auxin-responsive SAUR family member. (Os09t0546700-00)
Sequence

CAACACACACCTGAAACCAAGAACATAACAAGCAGCCGCCATGATCCATTCCAAGAAGCT
CGCTCAGCTTGCGAGGAAGCTGCAGAGGATCAAGACGGCCGCCAGCAACAGGGAGGACGA
CGACGCCGGCTGCACGTCGACCTCGCCGTCGCCGGTGGCGGACAAGGGCCACTGCGCCGT
GTACACGTCCGACGGGGCGCGGTTCGAGGTGCCGTTGCCGTACCTCGGCACGACGGTGTT
CGTCGAGCTCCTGAGGATGTCGCAGGAGGAGTTCGGGTTCGCCGGCGGCGACGGAAGGAT
CACGCTGCCCTGCGACGCGGCGGCGATGGAGTACGTGATGTGCTTGCTGAGGAGGAACGC
GTCGGAGGAGGTTGAGAGGGCGTTCCTGAGCTCGGTGGTGACGATGCCTTGCCAGAATTC
AGGCTGCACGATGCCACCTGTGGCGTTGCACCATCAGTTTGCAGTTTGTAGCTAA