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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0545500-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:21569436:21569954:-1 gene:Os09g0545500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAUR55 - auxin-responsive SAUR family member. (Os09t0545500-00)
Sequence

ATGATACATTCCAAGAGGCTTGCTCAGCTGGCGAGGAGGCTGCAGAGGGTCAAGACGACG
GCCGCCAGGGAAGACGACGCCTGCTGCACGACTTCTCCGGTTGCAGACAAGGGCCGTTGC
ACCATGTACACGGCAGACGGGAGGCGGTTCAAGGTGCCATTGCCGTACCTCGGAACAACG
GTCTTCGGCGAGCTCCTGAGGATGTCACAAGAGGAATTCGGGTTCGCCGGTGATGGGAGG
ATCACACTGCCCTGTGATGCGGCCGTGATGGAGTATGTCATGTGCTTGCTGAGGAGAAAT
GCATCGGAGGATGTTGAGAGGGCGTTCCTGAGCTCTGTAGTGATGTCTTGCCAAGATTCA
AGCTGTGGAGTGCCACCTGTGGCCTTGCACCAACAATTTTCAGTTTGTAGCTCCTGA

Peptide Sequence

PEP ID

Os09t0545500-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:21569436:21569954:-1 gene:Os09g0545500 transcript:Os09t0545500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAUR55 - auxin-responsive SAUR family member. (Os09t0545500-00)
Sequence

MIHSKRLAQLARRLQRVKTTAAREDDACCTTSPVADKGRCTMYTADGRRFKVPLPYLGTT
VFGELLRMSQEEFGFAGDGRITLPCDAAVMEYVMCLLRRNASEDVERAFLSSVVMSCQDS
SCGVPPVALHQQFSVCSS

Transcript Sequence

Transcript ID

Os09t0545500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:21569436:21569954:-1 gene:Os09g0545500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAUR55 - auxin-responsive SAUR family member. (Os09t0545500-00)
Sequence

AGTCACAAGGCTAAGCATTTCCTAAGCAACATACCTTAGATTCTGAGAACCAAAGAACAA
CCAGAACCAGCCATGATACATTCCAAGAGGCTTGCTCAGCTGGCGAGGAGGCTGCAGAGG
GTCAAGACGACGGCCGCCAGGGAAGACGACGCCTGCTGCACGACTTCTCCGGTTGCAGAC
AAGGGCCGTTGCACCATGTACACGGCAGACGGGAGGCGGTTCAAGGTGCCATTGCCGTAC
CTCGGAACAACGGTCTTCGGCGAGCTCCTGAGGATGTCACAAGAGGAATTCGGGTTCGCC
GGTGATGGGAGGATCACACTGCCCTGTGATGCGGCCGTGATGGAGTATGTCATGTGCTTG
CTGAGGAGAAATGCATCGGAGGATGTTGAGAGGGCGTTCCTGAGCTCTGTAGTGATGTCT
TGCCAAGATTCAAGCTGTGGAGTGCCACCTGTGGCCTTGCACCAACAATTTTCAGTTTGT
AGCTCCTGAAGATATACAGAGTTTTGCGCTGTTTACTGT