Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0545300-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:21565770:21566461:-1 gene:Os09g0545300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 39 description:SAUR family protein, Negative regulator of auxin synthesis and transport (Os09t0545300-01)
Sequence

ATGCCACTTCAAACCATCCATAAACTGAAGCACCAATACACTCACAACAAAAGCTCATCT
CATCAGAAGAAACACACCATGATCAATCCTAAGAGGCTAGTTCACCTGGCAAAGAAGTGG
CAACATATGGCAGCTCTTGGGAGGCGGAGGCTGACGATAACGGGAGCAACTAAAGAAGGC
AACCTACGCTGCTCATCAGCCATCGCAGATAAGGGCCACTGCATCATCTATACAGCTGAT
GGAGAGCGATTTGGGGTTCCATTGACATATCTGAGTACAACTGTGTTTGGCGAACTCCTA
AGGTTGTCTGAGGATGAATTTGGATTCACAGGTGAGGAAAAGATCACACTTCCTTGTGAG
GCAGCAGTGATGGAGTATGTGATGTGCTTGCTTAGGAGAAAGCCCTCGGAAGAGGTGGAA
CAGGCTGTTGTGAGCTCTGTCGTAATGCCATGTAATTACAAGAGTAGCACTAGCATGGTT
TCAGTCAATCTTAGCCAGTCACTAGCTATATTTTAG

Peptide Sequence

PEP ID

Os09t0545300-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:21565770:21566461:-1 gene:Os09g0545300 transcript:Os09t0545300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 39 description:SAUR family protein, Negative regulator of auxin synthesis and transport (Os09t0545300-01)
Sequence

MPLQTIHKLKHQYTHNKSSSHQKKHTMINPKRLVHLAKKWQHMAALGRRRLTITGATKEG
NLRCSSAIADKGHCIIYTADGERFGVPLTYLSTTVFGELLRLSEDEFGFTGEEKITLPCE
AAVMEYVMCLLRRKPSEEVEQAVVSSVVMPCNYKSSTSMVSVNLSQSLAIF

Transcript Sequence

Transcript ID

Os09t0545300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:21565770:21566461:-1 gene:Os09g0545300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 39 description:SAUR family protein, Negative regulator of auxin synthesis and transport (Os09t0545300-01)
Sequence

AGCTTATGGCTACAATTTTCCATTGTATGCTATATAAGTTCATGAAACTAGTACATGCCA
CTTCAAACCATCCATAAACTGAAGCACCAATACACTCACAACAAAAGCTCATCTCATCAG
AAGAAACACACCATGATCAATCCTAAGAGGCTAGTTCACCTGGCAAAGAAGTGGCAACAT
ATGGCAGCTCTTGGGAGGCGGAGGCTGACGATAACGGGAGCAACTAAAGAAGGCAACCTA
CGCTGCTCATCAGCCATCGCAGATAAGGGCCACTGCATCATCTATACAGCTGATGGAGAG
CGATTTGGGGTTCCATTGACATATCTGAGTACAACTGTGTTTGGCGAACTCCTAAGGTTG
TCTGAGGATGAATTTGGATTCACAGGTGAGGAAAAGATCACACTTCCTTGTGAGGCAGCA
GTGATGGAGTATGTGATGTGCTTGCTTAGGAGAAAGCCCTCGGAAGAGGTGGAACAGGCT
GTTGTGAGCTCTGTCGTAATGCCATGTAATTACAAGAGTAGCACTAGCATGGTTTCAGTC
AATCTTAGCCAGTCACTAGCTATATTTTAGCTACTGAGAAGCACTGTCTTCATGATGTGT
GCTCCTTTTTGGTAAATCTTAATGAAATCTAGTGTGTAAATAGATGTATATACCCCAGTA
AACAAGTAAAGAAATGTAGTTTTGCAGTTGGT