Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0545000-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:21544348:21547135:-1 gene:Os09g0545000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA234 description:Cation/H+ exchanger domain containing protein. (Os09t0545000-01);Cation/H+ exchanger domain containing protein. (Os09t0545000-02)
Sequence	ATGGGTGGATCGGCCGTGAATTGCGCCGTGCAGAACGTGTCCCTGGACACGCTCTTCCTC ATCGTCATCCAGGGCGCCGCCGTCATCGTGCTCGGCAAGTTCATCCACCTCTCCCTCCGG CGCCACAACCTGCCCAGCGCCATCTCCCAGATCGTCGCCGGTGTCGCCGTCGGCAGCCTG GGCCTGCACGACATGGTCGTCCACGTCGAGGTCCAGAACGTGGAGGACACCTACGGGTGG TACGTCTCCGAGGCCCGCATCTTCTACATGTTCTACGTCGGCCTCGACGCCGACCTCGCC GCGCTCTGGAACGACGCGCACCGCTGCACCGTCGTCACGTACGCCAGCGTCGCCACCTGC CTGCTCCTCGCCGCCTTCGTCTCCGGCGGCATCTACGGCAGCATGATGCACACCCCGGTC AGGTCCCCCGAGCTGCTCTCCGCCGTGCTCATGCTCACGCTGGCCAACACCGCCTCCGTC GACGTCTCCAGGATGGCCGCCGAGCTCGACCTCACGGCCACGGGCGGCGGCCGGCTCGCC GTCTCCACGGCGATCGCCACCAACATCATCTGCATCGTCGGGGAGGGGGTGTTCTCGTGC ATGAAGCTGGCGTCGAGCAGGACGCCGGGGTACAGCGCGTCGGAGCGGCTGGGGATGGGC GTGCTCGCGCTGCTCAAGGTGGGCGTCACCATGGCGCTGCTCCGGCCGGTGGCAGCGTAC ATGAACCGGCGCAACGCCGGGCGCCACCGCATCGGGAACTGGGAGCTGGTGCTGCTGCTC GTCGCCGTCTCCTTCGTCGGCAACTTCCCGGAGCACGCCGGGTTCGACGGGGTGCCGGCG AGCCTCCTGCTGGGGCTGGCGTTCCCGAGGGAAGGGCCCGTGGCGAGGAGCGTCATGGAC GCCATCGCCTACCCGCTCCACGCCCTGGCGCTGCCCTTCTACTTCGGCGCCATGGGCATG AGGATCAACTTCGGCGCCATGTCCGGCGCCATCGTCGTGCCCGCCGTCCTCCTCACGCTG CTCGGCCTCTTCGGCAAGTGCGCTGGCACCATGGCCGCCGCCAGGTACCTCAAGATGCCG CTCGCCGACGCCATCCGCCTCGGCGTCCTGCTCAACATCAAGGGCCACGTCAACATGATC GACATGAGCTTCGCTAGCTCGGAAGGGATATGGGCGGAGCAGGCGCTCATGGCGATGGTC GTCGGCAGCATCATAAGCACCGTCGTCGCCGGGCCGGTGTTCGCCGTGCTGTTCCGGAAG GAGAAGGAGGCGTACGCGTGCAGCGACCAGGCGCTCGAACACATGGCGCCGGACAAGGAG TTGCGCATGCTCGCCTGCGTGCACGGCGCGCGCGGCGCGCCGGCGATGCTCAGCCTCCTC GAGCTCCTGGCGACGACGCCCCGCGCGCAGCCCACCATCCACGTCCTCCACCTGTTCGAC GCCAGCCGCAAGCACGTCGGCCCGAAGCGCTACCACCAGCGGGTCCAGGACAGCGACAAG CACATTGACCGCCGCATCGACGACGCCACGCAGGTGAACTGGGCCGTCGACGTGTTCACC TCCGTCACCGGCCTCGCCATCCGCCAGTTCGACGTCGGCGACCGCGGCGCCGCCATGAAG AACGCGAAGAACATCCACCGCCGCTTGGAGGAAGTCCGCGCCGGGCTCCTGTTGTTGCCG TACCACAAGGAGCAGCGCTACGACGGCAAGATGGTCTGCCGGCGAGACGACCGCTGCGAG CTCAACCGCAAGGTGCTCGAGCTCGCCCCGTGCACCGTCGGCGTCTTCGCCGACCGCCCG TTCTGGAGGGGCGGCGCCAGCTTCCGGCTGCCGACCAAGATATCAACGAGCGAGGAGACG ACGGCGGCGAGGAACCAAGGCGACCAGAAGGCGGGGACCCAGATCGCCGCCGTCTTCCTC GGCGGCCCCGACGACCGGGAGGCGGTGGCGTTCGCGTGCCGCCTCGCCAAGAACGACGGC GCCATCAGGCTGACCGTCATCCGCCTCGTGCTAGGCGTCGCCACCAACGATGACCACCGC ATCCCGACGACGAGCGCCGCCAATCACATCGGCATCTACGACGACGACGACGAGGACGGC GGCGAGGAGGAGGTGCTGTCCGTGGTGGTTCAAGACGACGACCCCGACGAGCGGTGCGTG TCGGAGCTGCGGCGCGAGTACGTGGCGAAGGAGCGCGCGGAGTACGTGGAGAGGGCGGTG AGCGGGGCGGTGGACGTGGCGGCGGCGTTGCGCGCGACGGCGGGGGCGTTCGCGCTCGTG GTGGTGGGGCGCGGCGGGCGGCAGCCGCCGGAGCTGGTGGTGGGGCTCGAGGGGTGGGTC CAGATGATCGAGTACCCGGAGGTGGGCCCGGTCGGGGAGATGCTCGCGTCGGAGGAGTCG CTGGAGATGGGCTCCGTGCTCGTCGTGCAGCAGAGGACGGCGCCGCCGCCGCCGTTTCAT CTCAACATTCCGCCGGCGATCTGA

Peptide Sequence

PEP ID	Os09t0545000-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:21544348:21547135:-1 gene:Os09g0545000 transcript:Os09t0545000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA234 description:Cation/H+ exchanger domain containing protein. (Os09t0545000-01);Cation/H+ exchanger domain containing protein. (Os09t0545000-02)
Sequence	MGGSAVNCAVQNVSLDTLFLIVIQGAAVIVLGKFIHLSLRRHNLPSAISQIVAGVAVGSL GLHDMVVHVEVQNVEDTYGWYVSEARIFYMFYVGLDADLAALWNDAHRCTVVTYASVATC LLLAAFVSGGIYGSMMHTPVRSPELLSAVLMLTLANTASVDVSRMAAELDLTATGGGRLA VSTAIATNIICIVGEGVFSCMKLASSRTPGYSASERLGMGVLALLKVGVTMALLRPVAAY MNRRNAGRHRIGNWELVLLLVAVSFVGNFPEHAGFDGVPASLLLGLAFPREGPVARSVMD AIAYPLHALALPFYFGAMGMRINFGAMSGAIVVPAVLLTLLGLFGKCAGTMAAARYLKMP LADAIRLGVLLNIKGHVNMIDMSFASSEGIWAEQALMAMVVGSIISTVVAGPVFAVLFRK EKEAYACSDQALEHMAPDKELRMLACVHGARGAPAMLSLLELLATTPRAQPTIHVLHLFD ASRKHVGPKRYHQRVQDSDKHIDRRIDDATQVNWAVDVFTSVTGLAIRQFDVGDRGAAMK NAKNIHRRLEEVRAGLLLLPYHKEQRYDGKMVCRRDDRCELNRKVLELAPCTVGVFADRP FWRGGASFRLPTKISTSEETTAARNQGDQKAGTQIAAVFLGGPDDREAVAFACRLAKNDG AIRLTVIRLVLGVATNDDHRIPTTSAANHIGIYDDDDEDGGEEEVLSVVVQDDDPDERCV SELRREYVAKERAEYVERAVSGAVDVAAALRATAGAFALVVVGRGGRQPPELVVGLEGWV QMIEYPEVGPVGEMLASEESLEMGSVLVVQQRTAPPPPFHLNIPPAI

Transcript Sequence

Transcript ID	Os09t0545000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21544348:21547135:-1 gene:Os09g0545000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA234 description:Cation/H+ exchanger domain containing protein. (Os09t0545000-01);Cation/H+ exchanger domain containing protein. (Os09t0545000-02)
Sequence	TGCAGCTGCAGGGCCACCGTCTCCTCCGCCGCACGTTCGCCAGCCGTTGGCATTCGGCCG GCGAGCCGGCGAGCCGGCTGGCATGGGTGGATCGGCCGTGAATTGCGCCGTGCAGAACGT GTCCCTGGACACGCTCTTCCTCATCGTCATCCAGGGCGCCGCCGTCATCGTGCTCGGCAA GTTCATCCACCTCTCCCTCCGGCGCCACAACCTGCCCAGCGCCATCTCCCAGATCGTCGC CGGTGTCGCCGTCGGCAGCCTGGGCCTGCACGACATGGTCGTCCACGTCGAGGTCCAGAA CGTGGAGGACACCTACGGGTGGTACGTCTCCGAGGCCCGCATCTTCTACATGTTCTACGT CGGCCTCGACGCCGACCTCGCCGCGCTCTGGAACGACGCGCACCGCTGCACCGTCGTCAC GTACGCCAGCGTCGCCACCTGCCTGCTCCTCGCCGCCTTCGTCTCCGGCGGCATCTACGG CAGCATGATGCACACCCCGGTCAGGTCCCCCGAGCTGCTCTCCGCCGTGCTCATGCTCAC GCTGGCCAACACCGCCTCCGTCGACGTCTCCAGGATGGCCGCCGAGCTCGACCTCACGGC CACGGGCGGCGGCCGGCTCGCCGTCTCCACGGCGATCGCCACCAACATCATCTGCATCGT CGGGGAGGGGGTGTTCTCGTGCATGAAGCTGGCGTCGAGCAGGACGCCGGGGTACAGCGC GTCGGAGCGGCTGGGGATGGGCGTGCTCGCGCTGCTCAAGGTGGGCGTCACCATGGCGCT GCTCCGGCCGGTGGCAGCGTACATGAACCGGCGCAACGCCGGGCGCCACCGCATCGGGAA CTGGGAGCTGGTGCTGCTGCTCGTCGCCGTCTCCTTCGTCGGCAACTTCCCGGAGCACGC CGGGTTCGACGGGGTGCCGGCGAGCCTCCTGCTGGGGCTGGCGTTCCCGAGGGAAGGGCC CGTGGCGAGGAGCGTCATGGACGCCATCGCCTACCCGCTCCACGCCCTGGCGCTGCCCTT CTACTTCGGCGCCATGGGCATGAGGATCAACTTCGGCGCCATGTCCGGCGCCATCGTCGT GCCCGCCGTCCTCCTCACGCTGCTCGGCCTCTTCGGCAAGTGCGCTGGCACCATGGCCGC CGCCAGGTACCTCAAGATGCCGCTCGCCGACGCCATCCGCCTCGGCGTCCTGCTCAACAT CAAGGGCCACGTCAACATGATCGACATGAGCTTCGCTAGCTCGGAAGGGATATGGGCGGA GCAGGCGCTCATGGCGATGGTCGTCGGCAGCATCATAAGCACCGTCGTCGCCGGGCCGGT GTTCGCCGTGCTGTTCCGGAAGGAGAAGGAGGCGTACGCGTGCAGCGACCAGGCGCTCGA ACACATGGCGCCGGACAAGGAGTTGCGCATGCTCGCCTGCGTGCACGGCGCGCGCGGCGC GCCGGCGATGCTCAGCCTCCTCGAGCTCCTGGCGACGACGCCCCGCGCGCAGCCCACCAT CCACGTCCTCCACCTGTTCGACGCCAGCCGCAAGCACGTCGGCCCGAAGCGCTACCACCA GCGGGTCCAGGACAGCGACAAGCACATTGACCGCCGCATCGACGACGCCACGCAGGTGAA CTGGGCCGTCGACGTGTTCACCTCCGTCACCGGCCTCGCCATCCGCCAGTTCGACGTCGG CGACCGCGGCGCCGCCATGAAGAACGCGAAGAACATCCACCGCCGCTTGGAGGAAGTCCG CGCCGGGCTCCTGTTGTTGCCGTACCACAAGGAGCAGCGCTACGACGGCAAGATGGTCTG CCGGCGAGACGACCGCTGCGAGCTCAACCGCAAGGTGCTCGAGCTCGCCCCGTGCACCGT CGGCGTCTTCGCCGACCGCCCGTTCTGGAGGGGCGGCGCCAGCTTCCGGCTGCCGACCAA GATATCAACGAGCGAGGAGACGACGGCGGCGAGGAACCAAGGCGACCAGAAGGCGGGGAC CCAGATCGCCGCCGTCTTCCTCGGCGGCCCCGACGACCGGGAGGCGGTGGCGTTCGCGTG CCGCCTCGCCAAGAACGACGGCGCCATCAGGCTGACCGTCATCCGCCTCGTGCTAGGCGT CGCCACCAACGATGACCACCGCATCCCGACGACGAGCGCCGCCAATCACATCGGCATCTA CGACGACGACGACGAGGACGGCGGCGAGGAGGAGGTGCTGTCCGTGGTGGTTCAAGACGA CGACCCCGACGAGCGGTGCGTGTCGGAGCTGCGGCGCGAGTACGTGGCGAAGGAGCGCGC GGAGTACGTGGAGAGGGCGGTGAGCGGGGCGGTGGACGTGGCGGCGGCGTTGCGCGCGAC GGCGGGGGCGTTCGCGCTCGTGGTGGTGGGGCGCGGCGGGCGGCAGCCGCCGGAGCTGGT GGTGGGGCTCGAGGGGTGGGTCCAGATGATCGAGTACCCGGAGGTGGGCCCGGTCGGGGA GATGCTCGCGTCGGAGGAGTCGCTGGAGATGGGCTCCGTGCTCGTCGTGCAGCAGAGGAC GGCGCCGCCGCCGCCGTTTCATCTCAACATTCCGCCGGCGATCTGACACGCTACATACAA AACGTACAAAAAAAATTAAATCAGTGTAAGGATTATTATAGCTGTGTATATTTAGAGCGT GGTAGAAGACTAGATCAAATTTTGTATTCAGTAAAATTCGGGGAAAAAGAAACGACGAAA TAGTTAACAAATGCAGGGT