Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0544000-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21463619:21465476:1 gene:Os09g0544000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os09t0544000-01)
Sequence	ATGGAGGTGAAGGTGTTGAGCTCTAGGCTGGTCAGGCCGTCGTACCCGGCGTCGGCGGCG GCGCCGGAGGAGGAGTTCGTGCCGTCGTCGATGTTCGACAAGGTGACGTACGACATGCAG ATGGCCATCATCTACGCGTTCCGGCCGCCGGGGCCCTCCGTGGCCGACATCGAGAAGGGG CTCGCCGCGGTGCTCGGCGTCTACCGCCTCTTCGCCGGACAGGTGGTCCGCGGCGGCGGC GGCGAGCTGCGGGGCGTCGTGCTGAATGACCATGGGGCCAGGCTGGTCGAGGCCTGCGTG GATGGTAGCCTCGCCGACATCGCACCGGCGAAGCCGTCGCCGGTGGTGCTGCGGCTGCAT CCCAGCCTCGAGGGGGAGATCGAGGAGGTCGTGCAGGTGCAGCTCACGCGGTTCGCGTGC GGCTCGCTGGCCGTCGGGTTCACGGCGAACCACGCCGTCGCGGATGGGCACGCCACCAGC GACTTCCTCGTCGCGTGGGGCCGCGCCGCGCGTGGGCTCGCCGTGGCCGCCACGGCGGCG GCGCCGCCGCACCACCACCCGGGGATGTTCCGGCCACGCGACCCGCCGCTCGTCGAGTTC GAGCACCGCGGCGTGGAATACTACCGCCCGCCGCCGCCGGCGGCCGGTGTCGACGGCGAT GTCGGCGGCGACCACAAGCAGCAGCACGGGCACGGCGGCGAGGAGGCGAGCCACGGGATC GTGATCCACAAGGCGCACTTCACCAAGGACTTCATCGCGAGGCTCCGCGCGGCGGCGTCG GAGGGGCGCGGCCGGCCGTTCAGCCGGTTCGAGACCATCCTCGCCCACGTGTGGCGCACC ATGACGCGGGCGCGGGGGCTCGGCAACCCGCTCCAGAGCTCCACCATCCGCATCTCCGTC GACGGCCGGCAGCGGCTGTCGGCGCCGGCGGGGTACTTCGGCAACCTCGTCCTCTGGGCG TTCCCGCGCGCCACCGTGGGGGACCTCCTCGGGCGGCCGCTGAAGCACGCGGCGCAGGTG ATCCACGACGCCGTCGCCCGCGCCGACGCCGCCTACTTCCGGTCGTTCGTCGACTTCGCG AGCTCCGGCGCCGTCGAGGGCGAGGGGCTCGCCCCGACCGCCGTGCTCAAGGACGTGCTG TGCCCCGACCTGGAGGTGGACAGCTGGCTCACCTTCCCGTTCTACGAGCTCGACTTCGGC GGCGGCTGCCCGACCTACTTCATGCCGTCCTACTTCCCGACGGAGGGGATGCTGTTCCTG GTGCCGTCGTACCTCGGCGACGGCAGCGTCGACGCCTTCGTCCCCGTCTTCGACCACAAC CTCGAGGCATTCAAGCAGAGCTGCTACTCCATAGAGTAG

Peptide Sequence

PEP ID	Os09t0544000-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21463619:21465476:1 gene:Os09g0544000 transcript:Os09t0544000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os09t0544000-01)
Sequence	MEVKVLSSRLVRPSYPASAAAPEEEFVPSSMFDKVTYDMQMAIIYAFRPPGPSVADIEKG LAAVLGVYRLFAGQVVRGGGGELRGVVLNDHGARLVEACVDGSLADIAPAKPSPVVLRLH PSLEGEIEEVVQVQLTRFACGSLAVGFTANHAVADGHATSDFLVAWGRAARGLAVAATAA APPHHHPGMFRPRDPPLVEFEHRGVEYYRPPPPAAGVDGDVGGDHKQQHGHGGEEASHGI VIHKAHFTKDFIARLRAAASEGRGRPFSRFETILAHVWRTMTRARGLGNPLQSSTIRISV DGRQRLSAPAGYFGNLVLWAFPRATVGDLLGRPLKHAAQVIHDAVARADAAYFRSFVDFA SSGAVEGEGLAPTAVLKDVLCPDLEVDSWLTFPFYELDFGGGCPTYFMPSYFPTEGMLFL VPSYLGDGSVDAFVPVFDHNLEAFKQSCYSIE

Transcript Sequence

Transcript ID	Os09t0544000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21463619:21465476:1 gene:Os09g0544000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os09t0544000-01)
Sequence	GGGGCACGAGGCAGTGTGTGCAGCAGCATCAAACGCCTCACCTGCACGAGCAAACGAACA AAAAAAAACGTTGCTGGAAATAATGGAGGTGAAGGTGTTGAGCTCTAGGCTGGTCAGGCC GTCGTACCCGGCGTCGGCGGCGGCGCCGGAGGAGGAGTTCGTGCCGTCGTCGATGTTCGA CAAGGTGACGTACGACATGCAGATGGCCATCATCTACGCGTTCCGGCCGCCGGGGCCCTC CGTGGCCGACATCGAGAAGGGGCTCGCCGCGGTGCTCGGCGTCTACCGCCTCTTCGCCGG ACAGGTGGTCCGCGGCGGCGGCGGCGAGCTGCGGGGCGTCGTGCTGAATGACCATGGGGC CAGGCTGGTCGAGGCCTGCGTGGATGGTAGCCTCGCCGACATCGCACCGGCGAAGCCGTC GCCGGTGGTGCTGCGGCTGCATCCCAGCCTCGAGGGGGAGATCGAGGAGGTCGTGCAGGT GCAGCTCACGCGGTTCGCGTGCGGCTCGCTGGCCGTCGGGTTCACGGCGAACCACGCCGT CGCGGATGGGCACGCCACCAGCGACTTCCTCGTCGCGTGGGGCCGCGCCGCGCGTGGGCT CGCCGTGGCCGCCACGGCGGCGGCGCCGCCGCACCACCACCCGGGGATGTTCCGGCCACG CGACCCGCCGCTCGTCGAGTTCGAGCACCGCGGCGTGGAATACTACCGCCCGCCGCCGCC GGCGGCCGGTGTCGACGGCGATGTCGGCGGCGACCACAAGCAGCAGCACGGGCACGGCGG CGAGGAGGCGAGCCACGGGATCGTGATCCACAAGGCGCACTTCACCAAGGACTTCATCGC GAGGCTCCGCGCGGCGGCGTCGGAGGGGCGCGGCCGGCCGTTCAGCCGGTTCGAGACCAT CCTCGCCCACGTGTGGCGCACCATGACGCGGGCGCGGGGGCTCGGCAACCCGCTCCAGAG CTCCACCATCCGCATCTCCGTCGACGGCCGGCAGCGGCTGTCGGCGCCGGCGGGGTACTT CGGCAACCTCGTCCTCTGGGCGTTCCCGCGCGCCACCGTGGGGGACCTCCTCGGGCGGCC GCTGAAGCACGCGGCGCAGGTGATCCACGACGCCGTCGCCCGCGCCGACGCCGCCTACTT CCGGTCGTTCGTCGACTTCGCGAGCTCCGGCGCCGTCGAGGGCGAGGGGCTCGCCCCGAC CGCCGTGCTCAAGGACGTGCTGTGCCCCGACCTGGAGGTGGACAGCTGGCTCACCTTCCC GTTCTACGAGCTCGACTTCGGCGGCGGCTGCCCGACCTACTTCATGCCGTCCTACTTCCC GACGGAGGGGATGCTGTTCCTGGTGCCGTCGTACCTCGGCGACGGCAGCGTCGACGCCTT CGTCCCCGTCTTCGACCACAACCTCGAGGCATTCAAGCAGAGCTGCTACTCCATAGAGTA GCTCTACCTTAGCTCTCGCTCGAGTTTTATCCTAAATCTCTATATTGCATTTTGTGTTGC ATGCGACGGTTGCGTGCATGGCGAACACCGACCGACCGACCGAACCGTATTTCCGCGTGT TTATGCACACCGATCGATCTTAGCTGATAGTTCGATTATTATTATTATTATTATAATACA GTATATTAATTATTCCGGTATGTGTAGCCGTGTGCATTTGTGCGTTGCTAGAGAGATCGA CTTTTACTTTGCCGGAGTTGTAAGTTATGTAGGGTTGCTTTTTAATCCGTGAGCAGCTAG CAAAAAAAAAGAAGGTGTCTTTATGTACTTTGTGTGCTGTACATGCATGTTCGATGTCTC CTAATGGTCTTTCTGTTGCAGGATGTATACATAAACCTTTATCTAATTGTCTATATGT