Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0543900-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:21450712:21452128:1 gene:Os09g0543900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PUTRESCINE HYDROXYCINNAMOYL TRANSFERASE 3 description:Transferase family protein. (Os09t0543900-01);Transferase family protein. (Os09t0543900-02)
Sequence	ATGGAGGTCAAGGTATTGAGCAGCAAGCTCGTCAAGCCCGCCTACAATGGCGGTGTCGCC GCGGCCCCCGACGTGGAGTATATTCCTTTGTCGATCTTCGACAAGGTGACGTACAAGATG CAGATGGCGATCATCTACGCGTTCCCGCCGCCGGCGCCGTCGACGGCGGCCATCGAGAAG GGGCTCGCGGCGGTGCTCGCGCAGTACCGCGCGTTCGCGGGGCAGCTCGGGGAGTCGCCC GACGGCGAGGCGGCGGTGGTGCTGAACGACCGCGGCGCGCGGCTGGTGGAGGCGGCGGTG GACGCCGACCTCGTGGACATGGCGCCGGCGAAGCCCACGCCGGAGCTGCTCCGGCTGCAC CCGGACCTGGAGGGGGAGCTCCAGGAGGTGGTGCTGCTCCAGCTGACGCGGTTCAGGTGC GGCTCCCTCGCCGTCGGGTTCACCTCCAACCACGTCGTCGCCGACGGCCACGCCACCAGC AACTTCCTCGTGGCGTGGGGGCGCGCCACCAGGGGGCTCCCCATGGGCGCCCCGCCCGTG CACCACCACGCCGCCCTCTTCAAGCCCCGCCCCTCGCCGCACGTCGAGCACGACCACCGC AACAGAGAGTACTACCTCCCCGCCGCCGGCGACGACAGCCACGGCCACGGCGACGGCGGC GCGGCGGACAACATCGTGATCCACAAGGCGCACTTCACCAAGGACTTCATCGCCGGCCTC CGCGCGGCGGCGTCGGAGGGGCGCGGCCGGCCGTTCAGCCGGTTCGAGACCATCCTCGCC CACCTATGGCGCACTATGACGCGCGCCCGCGGGCTCAGCCCCGACGAGGCCTCCACCATC CGCCTCTCCGTCGACGGCCGCCACCGCCTCGGCGCGCCGGCGGAGTACTTCGGCAACCTC GTCCTCTGGGCGTTCCCGCGCGCCACCGTCGGCGACCTCCTCACCCGGCCGCTCAAGCAC GCCGCGCAGGTGATCCACGACGAGGTGGCGCGCGTCGACGGCGCCTACTTCCGCTCCTTC CTCGACTTCGCCCTCTCCGGCGCCGGCGGCGACAAGGAGGGGCTCGCGCCGAGCGCCGTG CTCAAGGACGTGCTGTGCCCGAACGCCGAGGTGGACAGCTGGCTCACCTTCCCGTTCTAC GAGCTCGACTTCGGCACCGGCAGCCCGACCTACTTCATGCCGTCGTACTTTCCGACGGAG GGGATGCTGTTCCTGGTGCCGTCGTACCTCGGCGACGGCAGCGTCGACGCCTTCGTCCCC GTCTTCAACCACAACCTCGAGGCATTCAAGGAGTGCTGCTACTCCATGGAGTAA

Peptide Sequence

PEP ID	Os09t0543900-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:21450712:21452128:1 gene:Os09g0543900 transcript:Os09t0543900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PUTRESCINE HYDROXYCINNAMOYL TRANSFERASE 3 description:Transferase family protein. (Os09t0543900-01);Transferase family protein. (Os09t0543900-02)
Sequence	MEVKVLSSKLVKPAYNGGVAAAPDVEYIPLSIFDKVTYKMQMAIIYAFPPPAPSTAAIEK GLAAVLAQYRAFAGQLGESPDGEAAVVLNDRGARLVEAAVDADLVDMAPAKPTPELLRLH PDLEGELQEVVLLQLTRFRCGSLAVGFTSNHVVADGHATSNFLVAWGRATRGLPMGAPPV HHHAALFKPRPSPHVEHDHRNREYYLPAAGDDSHGHGDGGAADNIVIHKAHFTKDFIAGL RAAASEGRGRPFSRFETILAHLWRTMTRARGLSPDEASTIRLSVDGRHRLGAPAEYFGNL VLWAFPRATVGDLLTRPLKHAAQVIHDEVARVDGAYFRSFLDFALSGAGGDKEGLAPSAV LKDVLCPNAEVDSWLTFPFYELDFGTGSPTYFMPSYFPTEGMLFLVPSYLGDGSVDAFVP VFNHNLEAFKECCYSME

Transcript Sequence

Transcript ID	Os09t0543900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21450712:21452128:1 gene:Os09g0543900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PUTRESCINE HYDROXYCINNAMOYL TRANSFERASE 3 description:Transferase family protein. (Os09t0543900-01);Transferase family protein. (Os09t0543900-02)
Sequence	GCTACTAGCTCAGACAGCAATGGAGGTCAAGGTATTGAGCAGCAAGCTCGTCAAGCCCGC CTACAATGGCGGTGTCGCCGCGGCCCCCGACGTGGAGTATATTCCTTTGTCGATCTTCGA CAAGGTGACGTACAAGATGCAGATGGCGATCATCTACGCGTTCCCGCCGCCGGCGCCGTC GACGGCGGCCATCGAGAAGGGGCTCGCGGCGGTGCTCGCGCAGTACCGCGCGTTCGCGGG GCAGCTCGGGGAGTCGCCCGACGGCGAGGCGGCGGTGGTGCTGAACGACCGCGGCGCGCG GCTGGTGGAGGCGGCGGTGGACGCCGACCTCGTGGACATGGCGCCGGCGAAGCCCACGCC GGAGCTGCTCCGGCTGCACCCGGACCTGGAGGGGGAGCTCCAGGAGGTGGTGCTGCTCCA GCTGACGCGGTTCAGGTGCGGCTCCCTCGCCGTCGGGTTCACCTCCAACCACGTCGTCGC CGACGGCCACGCCACCAGCAACTTCCTCGTGGCGTGGGGGCGCGCCACCAGGGGGCTCCC CATGGGCGCCCCGCCCGTGCACCACCACGCCGCCCTCTTCAAGCCCCGCCCCTCGCCGCA CGTCGAGCACGACCACCGCAACAGAGAGTACTACCTCCCCGCCGCCGGCGACGACAGCCA CGGCCACGGCGACGGCGGCGCGGCGGACAACATCGTGATCCACAAGGCGCACTTCACCAA GGACTTCATCGCCGGCCTCCGCGCGGCGGCGTCGGAGGGGCGCGGCCGGCCGTTCAGCCG GTTCGAGACCATCCTCGCCCACCTATGGCGCACTATGACGCGCGCCCGCGGGCTCAGCCC CGACGAGGCCTCCACCATCCGCCTCTCCGTCGACGGCCGCCACCGCCTCGGCGCGCCGGC GGAGTACTTCGGCAACCTCGTCCTCTGGGCGTTCCCGCGCGCCACCGTCGGCGACCTCCT CACCCGGCCGCTCAAGCACGCCGCGCAGGTGATCCACGACGAGGTGGCGCGCGTCGACGG CGCCTACTTCCGCTCCTTCCTCGACTTCGCCCTCTCCGGCGCCGGCGGCGACAAGGAGGG GCTCGCGCCGAGCGCCGTGCTCAAGGACGTGCTGTGCCCGAACGCCGAGGTGGACAGCTG GCTCACCTTCCCGTTCTACGAGCTCGACTTCGGCACCGGCAGCCCGACCTACTTCATGCC GTCGTACTTTCCGACGGAGGGGATGCTGTTCCTGGTGCCGTCGTACCTCGGCGACGGCAG CGTCGACGCCTTCGTCCCCGTCTTCAACCACAACCTCGAGGCATTCAAGGAGTGCTGCTA CTCCATGGAGTAAAATTCAAAATCAAAATCAAAATCAAATCATTTATTCGTTATTATTAT TGATTATGGAGTAATAATAATAAGTTAAATTTTTATT