Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0542600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21370810:21372435:-1 gene:Os09g0542600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1I. (Os09t0542600-01)
Sequence	ATGCTCTCGTTGGCCACCCGACTCCGGCGAGTCGCCGGCAAACTCGCCCGCTGCTTAGCC ACCTGCGTCTTCGCCACAGGCGTGCAAGCCGGAATGATGCTAGGCGCCATTGCTGGCGTC ATCGCAGGCTTCGTCAGCGAGGACGGGTTGCTCCAGGGGACGCTGATCGGGGCCATCTCC GGAGCTTTCATCGCCATGGAGGTCGTCGACTCGCTCGCCAAGATTTGGTGCTACGAGGAG TACTCCATCGCCACTCGAGCTCACCTCATGCTGCTTGTGTTCTGGAATCTTGTGATTGAT CGCCTCACCGTGCGCACCTCGGTTTTCCCTACCTTAACCACGGTGTTGGATAGCCAGTTG AACGCGGTGCCGTCGCGCCATAGACGAGCAGAGGTGAGCGGCGACCTGACCGGCCGGAGT TACCCGGTGGTGATGGGCATGCGGCTCGCCGCCGTCGACCAGCTTCCGGTGATCAAGCTC ACGGCGGCGCAGACGGACGCCACCGGCGCCTGCCCCATTTGCCTTCACGATTTCAAGGCC GGCGAGATTGCCAGGAGATTGCCGGCGTGTTGCCACATCTTCCATTTGGGGTGCATCGAC AACTGGTTGCTGTGGCATGCCCTATGCCCAATGTGCCGTCGTCCTGTCAACTAA

Peptide Sequence

PEP ID	Os09t0542600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21370810:21372435:-1 gene:Os09g0542600 transcript:Os09t0542600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1I. (Os09t0542600-01)
Sequence	MLSLATRLRRVAGKLARCLATCVFATGVQAGMMLGAIAGVIAGFVSEDGLLQGTLIGAIS GAFIAMEVVDSLAKIWCYEEYSIATRAHLMLLVFWNLVIDRLTVRTSVFPTLTTVLDSQL NAVPSRHRRAEVSGDLTGRSYPVVMGMRLAAVDQLPVIKLTAAQTDATGACPICLHDFKA GEIARRLPACCHIFHLGCIDNWLLWHALCPMCRRPVN

Transcript Sequence

Transcript ID	Os09t0542600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21370810:21372435:-1 gene:Os09g0542600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1I. (Os09t0542600-01)
Sequence	AGCTGCGCTGCTCCCGTTTTCGCGCGAAAGCAAGCAAGCAAGCAACGGCGGCGGCGGCGA TGCTCTCGTTGGCCACCCGACTCCGGCGAGTCGCCGGCAAACTCGCCCGCTGCTTAGCCA CCTGCGTCTTCGCCACAGGCGTGCAAGCCGGAATGATGCTAGGCGCCATTGCTGGCGTCA TCGCAGGCTTCGTCAGCGAGGACGGGTTGCTCCAGGGGACGCTGATCGGGGCCATCTCCG GAGCTTTCATCGCCATGGAGGTCGTCGACTCGCTCGCCAAGATTTGGTGCTACGAGGAGT ACTCCATCGCCACTCGAGCTCACCTCATGCTGCTTGTGTTCTGGAATCTTGTGATTGATC GCCTCACCGTGCGCACCTCGGTTTTCCCTACCTTAACCACGGTGTTGGATAGCCAGTTGA ACGCGGTGCCGTCGCGCCATAGACGAGCAGAGGTGAGCGGCGACCTGACCGGCCGGAGTT ACCCGGTGGTGATGGGCATGCGGCTCGCCGCCGTCGACCAGCTTCCGGTGATCAAGCTCA CGGCGGCGCAGACGGACGCCACCGGCGCCTGCCCCATTTGCCTTCACGATTTCAAGGCCG GCGAGATTGCCAGGAGATTGCCGGCGTGTTGCCACATCTTCCATTTGGGGTGCATCGACA ACTGGTTGCTGTGGCATGCCCTATGCCCAATGTGCCGTCGTCCTGTCAACTAAATGCAGG TGTACATAGTACATATGTAGACTTGCAAAAATAACTCAGGAAACCTAGAAACCTTTTTGT TGCACAAAGCATTTAACAAGAGTTTAATTTTTTTGCG