Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0542500-00
CDS Infomation	cds chromosome:IRGSP-1.0:9:21367019:21370174:1 gene:Os09g0542500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF632 domain containing protein. (Os09t0542500-00)
Sequence	ATGCGCGCGGTGAGGGAGCGGGAGGGGATCCCGGAGCTAGAGGAGGCGGAGGAGGAAGAC GACGAGGGGGCAAAGTCCGCGGCGGCGGCGAACGCCAAGACCCCCAAAGCAGCGGAAACT TCGCTCGGAGTGACCAAGCAAGAAGAGGCCAAAGACGTGTGCGAGGTAGCGAGCAACAAT GGCGGCCGCGGCGGCGGGCTGGAGGTGGCCGTGTCGCAGCCCGGGCGCGAGCTGCTCGCG GCGCTCAAGGAGATCGAGGAGCTCTTCGCGCGCGCCGCCGAGGCCGGCAAGGAGGTCACC GCCATGCTCGAGGCCGCCTCCCGTGTCCCCGAGCTCAAAGAAAATTCATCAAAAATAATC CATGCCATTACATGGCACCGATCCCCATCATCGGTGTCCTCATCCTACAGGAGTGAGCTG GGAGCCAGCTCGAACAGTTTGTCATGGACAGACAAGAGTGAAACTAAGAGTGATATATTC GATGACTATGGCGGAATGAAGTCAGGAAGTCACTCACAGACTTTAGGGAGATTGTATGCC TGGGAGAAGAAACTCTATGAAGAAGTTAAGGCTATAGATCAAATCCGACAAACTTATGAG AAGAAGTGCGTGCAGCTGAGGAACCAAGACGCCAAAGGTTCAGAACTGCGCTGCGCTGAA AAAACTAGGACAACTGTTAGAGACTTGTACACAAGGATCTGGGTTTCTCTACGTGCAGCG GAATCAATATCTGATAGAATTCAAAAATTGCGGGATGAGGAACTGCAACCACAACTTGTT GAGCTTTTGCAGGGGCTGACAAGAACTTGGAAAATAATGGTGGACTCACATGAAACCCAG AGACAGATAATGTTTGAGGTGAATTCGTTCACCTGCCCTGCTTATGGCAAATTCTGTAAC GATGCCCAGCGGCATGCTACTCTTAAGTTGGAGGCTGAACTGCGTAACTGGAGGTCCTGC TTTATGATCTATGTCAGTGCTCAGAAAGCATACATTGAAGCTCTTGATGGCTGGCTCTCC AAGTTTATCCTAACGGATACCATCCGTTATTCTCGAGGGATATCGTCGATTGCTCCTGAT AGGTCCAGTGCTCCACCTTTGGTCGTGATTTGTCATGACTGGTACACTACGCTGTCAAAG TTTCAAAACAAGCGGGTAGCTTTCACCATGAGAAACTTCATCAGAAGCGTGAGAGTGCTA TGGCTCAAGCAAGGGGAAGAGCAACAGCAGAAAAGAAAGGTGGACAGCCTCGCGAAAGAG ATGGACAAGAAGATCAGTGCTTACAAGAGAGCAGAGAACAAGGTTATTGAGACCAAGCTT CTGGAGCACAGACCTGAGCAGGACGCGAAGCAGCGCATGGAGCACCTGTCGGAGAAGAAG GAAATGCTGAATGTGCTGAGGAAGAGGGTCGAGGCCGAGAAAGCGAAGCACCACGCCTGT ATGCGCGATACGCACGATGTTACTCTCAACGGGTTCAAGATCGGCCTGGCCAGCATATTC GAGTCGCTGACCGAATTCTCCAAGGATTCCGTCAAACTCTACGAAGACCTTCTAACGCAT GCCGAACCCAAAGGTTCGGAGGACGCTACCGAGAAACGGCCCTGCGTGGAGGGGCCATAC TCTCAGATTTCAGTGGATGCTACATGA

Peptide Sequence

PEP ID	Os09t0542500-00
PEP Infomation	pep chromosome:IRGSP-1.0:9:21367019:21370174:1 gene:Os09g0542500 transcript:Os09t0542500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF632 domain containing protein. (Os09t0542500-00)
Sequence	MRAVREREGIPELEEAEEEDDEGAKSAAAANAKTPKAAETSLGVTKQEEAKDVCEVASNN GGRGGGLEVAVSQPGRELLAALKEIEELFARAAEAGKEVTAMLEAASRVPELKENSSKII HAITWHRSPSSVSSSYRSELGASSNSLSWTDKSETKSDIFDDYGGMKSGSHSQTLGRLYA WEKKLYEEVKAIDQIRQTYEKKCVQLRNQDAKGSELRCAEKTRTTVRDLYTRIWVSLRAA ESISDRIQKLRDEELQPQLVELLQGLTRTWKIMVDSHETQRQIMFEVNSFTCPAYGKFCN DAQRHATLKLEAELRNWRSCFMIYVSAQKAYIEALDGWLSKFILTDTIRYSRGISSIAPD RSSAPPLVVICHDWYTTLSKFQNKRVAFTMRNFIRSVRVLWLKQGEEQQQKRKVDSLAKE MDKKISAYKRAENKVIETKLLEHRPEQDAKQRMEHLSEKKEMLNVLRKRVEAEKAKHHAC MRDTHDVTLNGFKIGLASIFESLTEFSKDSVKLYEDLLTHAEPKGSEDATEKRPCVEGPY SQISVDAT

Transcript Sequence

Transcript ID	Os09t0542500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21367019:21370174:1 gene:Os09g0542500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF632 domain containing protein. (Os09t0542500-00)
Sequence	ATGCGCGCGGTGAGGGAGCGGGAGGGGATCCCGGAGCTAGAGGAGGCGGAGGAGGAAGAC GACGAGGGGGCAAAGTCCGCGGCGGCGGCGAACGCCAAGACCCCCAAAGCAGCGGAAACT TCGCTCGGAGTGACCAAGCAAGAAGAGGCCAAAGACGTGTGCGAGGTAGCGAGCAACAAT GGCGGCCGCGGCGGCGGGCTGGAGGTGGCCGTGTCGCAGCCCGGGCGCGAGCTGCTCGCG GCGCTCAAGGAGATCGAGGAGCTCTTCGCGCGCGCCGCCGAGGCCGGCAAGGAGGTCACC GCCATGCTCGAGGCCGCCTCCCGTGTCCCCGAGCTCAAAGAAAATTCATCAAAAATAATC CATGCCATTACATGGCACCGATCCCCATCATCGGTGTCCTCATCCTACAGGAGTGAGCTG GGAGCCAGCTCGAACAGTTTGTCATGGACAGACAAGAGTGAAACTAAGAGTGATATATTC GATGACTATGGCGGAATGAAGTCAGGAAGTCACTCACAGACTTTAGGGAGATTGTATGCC TGGGAGAAGAAACTCTATGAAGAAGTTAAGGCTATAGATCAAATCCGACAAACTTATGAG AAGAAGTGCGTGCAGCTGAGGAACCAAGACGCCAAAGGTTCAGAACTGCGCTGCGCTGAA AAAACTAGGACAACTGTTAGAGACTTGTACACAAGGATCTGGGTTTCTCTACGTGCAGCG GAATCAATATCTGATAGAATTCAAAAATTGCGGGATGAGGAACTGCAACCACAACTTGTT GAGCTTTTGCAGGGGCTGACAAGAACTTGGAAAATAATGGTGGACTCACATGAAACCCAG AGACAGATAATGTTTGAGGTGAATTCGTTCACCTGCCCTGCTTATGGCAAATTCTGTAAC GATGCCCAGCGGCATGCTACTCTTAAGTTGGAGGCTGAACTGCGTAACTGGAGGTCCTGC TTTATGATCTATGTCAGTGCTCAGAAAGCATACATTGAAGCTCTTGATGGCTGGCTCTCC AAGTTTATCCTAACGGATACCATCCGTTATTCTCGAGGGATATCGTCGATTGCTCCTGAT AGGTCCAGTGCTCCACCTTTGGTCGTGATTTGTCATGACTGGTACACTACGCTGTCAAAG TTTCAAAACAAGCGGGTAGCTTTCACCATGAGAAACTTCATCAGAAGCGTGAGAGTGCTA TGGCTCAAGCAAGGGGAAGAGCAACAGCAGAAAAGAAAGGTGGACAGCCTCGCGAAAGAG ATGGACAAGAAGATCAGTGCTTACAAGAGAGCAGAGAACAAGGTTATTGAGACCAAGCTT CTGGAGCACAGACCTGAGCAGGACGCGAAGCAGCGCATGGAGCACCTGTCGGAGAAGAAG GAAATGCTGAATGTGCTGAGGAAGAGGGTCGAGGCCGAGAAAGCGAAGCACCACGCCTGT ATGCGCGATACGCACGATGTTACTCTCAACGGGTTCAAGATCGGCCTGGCCAGCATATTC GAGTCGCTGACCGAATTCTCCAAGGATTCCGTCAAACTCTACGAAGACCTTCTAACGCAT GCCGAACCCAAAGGTTCGGAGGACGCTACCGAGAAACGGCCCTGCGTGGAGGGGCCATAC TCTCAGATTTCAGTGGATGCTACATGA