Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0540600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21276447:21280591:1 gene:Os09g0540600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 4_1 description:Similar to WD-40 repeat protein MSI1. (Os09t0540600-01)
Sequence	ATGGACGGCGGGTCCTCCACGGCGGCGAGGTCGTCGGCGGCGGAGATGGAGGAGCACCAG AACTGGAAGAAGAACGCGCCGGTGCTCTACGACCTCGTCATCTCCCAGCCGCTCGAGTGG CCGTCGCTCACCGTCCAGTGGCTCCCCTCCCACTCCCGGTCGCCGGGCTCCGCCCGCTCC CACCGCCTCGTCCTCGGCACCCACACCTCCGACGAGACGCCCAACCACCTCCTACTCGCC GACGCCGCCCTCCCGCTCCCGCCCCGCCTGGCGGCGGCGGCCGCGGCGGCGGGCGGTGCC GTCCCGGCCCCGTCCGTGTCCATCTCCCGCTCGGTGCCGCACAAGGGCGAGGTCAACCGC GCCCGCTGCATGCCGCAGAGGCCGTACACGGTGGCTACCAAGACCTGCGTGGATGAGGTG CACGTGTACCATCTTGGCGACGGCGGCGAGAAGGGCGGCGCCGATGTGGTGCTCAGGGGG CATGAAGCGGAGGGGTATGGGCTGGCGTGGAGTCCGATGAAGGAGGGGTTGCTGCTGAGC GGCTCGTATGATAAGAAGATTTGCCTTTGGGATCTCGCTGCTGGGAGTGGAGCTTCGTCT CTGGATGCACATCATGTGTTCGAGGCTCATGACGATGTTGTTGAAGATGTTGCATGGCAC CTGAAAGATGAAAACCTATTTGGATCTGCTGGGGATGACTGCAAGCTGATGATGTGGGAC TTGCGTACTAATAAACCAGGACAATCTATAGTAGCACACCAAAAAGAAGTAAACTCTTTG TCCTTCAATCCGTTTAATGAGTGGATCTTGGCTTCAGCATCTGGAGATGCAACTATTAAG CTATTTGACTTGCGAAAACTGTCAAGAAGCCTGCATGTATTCGACAGCCATGACTCCTGT AGGGGAGAGGTTTTTCAGGTTGAGTGGAATCCTAATTTGGAGACTGTGTTAGCATCCTCA GCTGCAGACAAAAGGGTGATGATATGGGATGTTAGCAGGATCGGAGACGAGCAGGCAGAG GAGGATGCAAACGATGGTCCACCGGAGCTGCTGTTCGTGCATGGAGGCCACACAGCCAAG ATATCAGAGTTGTCGTGGAACCCCACCCAGAAATGGGTCATGGCCAGCGTGGCCGAGGAT AACATCCTGCAGATCTGGGAGATGGCAGAAAGCATATACTGTGATGACAATTATCTCCAT GACAATGATGATGACTCGTGCCCAGCCACATAA

Peptide Sequence

PEP ID	Os09t0540600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21276447:21280591:1 gene:Os09g0540600 transcript:Os09t0540600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 4_1 description:Similar to WD-40 repeat protein MSI1. (Os09t0540600-01)
Sequence	MDGGSSTAARSSAAEMEEHQNWKKNAPVLYDLVISQPLEWPSLTVQWLPSHSRSPGSARS HRLVLGTHTSDETPNHLLLADAALPLPPRLAAAAAAAGGAVPAPSVSISRSVPHKGEVNR ARCMPQRPYTVATKTCVDEVHVYHLGDGGEKGGADVVLRGHEAEGYGLAWSPMKEGLLLS GSYDKKICLWDLAAGSGASSLDAHHVFEAHDDVVEDVAWHLKDENLFGSAGDDCKLMMWD LRTNKPGQSIVAHQKEVNSLSFNPFNEWILASASGDATIKLFDLRKLSRSLHVFDSHDSC RGEVFQVEWNPNLETVLASSAADKRVMIWDVSRIGDEQAEEDANDGPPELLFVHGGHTAK ISELSWNPTQKWVMASVAEDNILQIWEMAESIYCDDNYLHDNDDDSCPAT

Transcript Sequence

Transcript ID	Os09t0540600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21276447:21280591:1 gene:Os09g0540600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator 4_1 description:Similar to WD-40 repeat protein MSI1. (Os09t0540600-01)
Sequence	ATCGTCTCCCCAATCTTTTTGGCGGGAGAGCACCACAGCGCCGCCTCCACTTCCCGCGCA ATTCGCAAGAGAAGAGCCATGGACGGCGGGTCCTCCACGGCGGCGAGGTCGTCGGCGGCG GAGATGGAGGAGCACCAGAACTGGAAGAAGAACGCGCCGGTGCTCTACGACCTCGTCATC TCCCAGCCGCTCGAGTGGCCGTCGCTCACCGTCCAGTGGCTCCCCTCCCACTCCCGGTCG CCGGGCTCCGCCCGCTCCCACCGCCTCGTCCTCGGCACCCACACCTCCGACGAGACGCCC AACCACCTCCTACTCGCCGACGCCGCCCTCCCGCTCCCGCCCCGCCTGGCGGCGGCGGCC GCGGCGGCGGGCGGTGCCGTCCCGGCCCCGTCCGTGTCCATCTCCCGCTCGGTGCCGCAC AAGGGCGAGGTCAACCGCGCCCGCTGCATGCCGCAGAGGCCGTACACGGTGGCTACCAAG ACCTGCGTGGATGAGGTGCACGTGTACCATCTTGGCGACGGCGGCGAGAAGGGCGGCGCC GATGTGGTGCTCAGGGGGCATGAAGCGGAGGGGTATGGGCTGGCGTGGAGTCCGATGAAG GAGGGGTTGCTGCTGAGCGGCTCGTATGATAAGAAGATTTGCCTTTGGGATCTCGCTGCT GGGAGTGGAGCTTCGTCTCTGGATGCACATCATGTGTTCGAGGCTCATGACGATGTTGTT GAAGATGTTGCATGGCACCTGAAAGATGAAAACCTATTTGGATCTGCTGGGGATGACTGC AAGCTGATGATGTGGGACTTGCGTACTAATAAACCAGGACAATCTATAGTAGCACACCAA AAAGAAGTAAACTCTTTGTCCTTCAATCCGTTTAATGAGTGGATCTTGGCTTCAGCATCT GGAGATGCAACTATTAAGCTATTTGACTTGCGAAAACTGTCAAGAAGCCTGCATGTATTC GACAGCCATGACTCCTGTAGGGGAGAGGTTTTTCAGGTTGAGTGGAATCCTAATTTGGAG ACTGTGTTAGCATCCTCAGCTGCAGACAAAAGGGTGATGATATGGGATGTTAGCAGGATC GGAGACGAGCAGGCAGAGGAGGATGCAAACGATGGTCCACCGGAGCTGCTGTTCGTGCAT GGAGGCCACACAGCCAAGATATCAGAGTTGTCGTGGAACCCCACCCAGAAATGGGTCATG GCCAGCGTGGCCGAGGATAACATCCTGCAGATCTGGGAGATGGCAGAAAGCATATACTGT GATGACAATTATCTCCATGACAATGATGATGACTCGTGCCCAGCCACATAAGGACCTGGC CAACTTCCCTATTCTGTTTCTGTTGCGTCTTTGGATAGCTTGGTTGGATTGATCATATAT TCAGTTAGTAACCTCTAGTAGGCTTTGAGATGCTGTTGTTTAATCAGCTTTCGTTTTCGT TTGACACCTCCAATCCAAGGATGGAACATCTTGATGTAGAATGTCCAACTATTTACTACT GTATGCCTTGCCTTGCCTCC